Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->WRKY18(1)                                                                               <--------ZAP1                                                                              --------->LBD16                                      ------>ZmHOX2a(2)                      --------->LBD16                             --------->YAB1                            <----------DOF2                       --------->ANAC58                                <---------DAG2                       --------->ANAC58                     ---------->ID1  <---------LBD16                 <---------LBD16  <---------YAB1           <-----------GT1 <---------LBD16         --                <---------LBD16 --------->YAB1  --------->YAB1     ---------->ID1    <---------ARR11(3)   gtgagagaaacttacattctcgggcaaacaataaccatgatcgatgggaataagaagagtttttccttcttcgcttttcccggtcaatatgtttccagca  23947900                                                   ------>ZmHOX2a(1)                                                  <---------------AGL15                                                  --------->TOE2(3) --------->LBD16                                                  --------------->AGL15               --------->At4g35610                                                 <-----------------AGL1               <---------At4g35610                                                 ----------------->AG                 --------->ZAT2                                                 ----------------->AGL1               --------->HSFB2a(1)                                           <---------ZAT18    --------->ANAC58        --------->HSFC1(2)                                           <---------ZAT14    --------->ANAC58        <---------HSFB2a(1)                                           --------->ZAT18 --------->ARR14(2)         <---------ZAT2                                    --------->ARR11(3)     <---------ARR14(2)         <---------HSFC1(2)    ------>ZmHOX2a(2)               <---------ARR14(2)   --------->ANAC58            <---------TOE1(2)  --------->ARR14(2)                --------->ARR14(2)   --------->ANAC58 --------->At4g35610  <---------ARR14(2)      ---------->DOF2  --------->ZAT14<------ZmHOX2a(1)       --------->ANAC46 ------->DDF1   --------->ICU4      <---------GLK1(2)    --------->ANAC46 <---------At4g35610   tgtcgatctgcatttgccattcttatgtcaaagacacagattttgtgcacttcctcaacaggaaacgctccagggccgatgtcttcgcagcttccattgt  23948000                                                        --------------->AGL15                                                        <---------------AGL15                                                       ----------------->AGL1                                                       <-----------------AGL1                                                      <-----------------AG      <---------ANAC46                                                      ------->TEIL<---------MYB46(3)      -----------                                                      <-----------------AGL1    <---------ANAC58                         <----------DOF2         <---------At4g35610            <---------ANAC58                       ------>MYB46(1)        --------->ZAT2      --------->MYB111(1)   --------->At4g35610                       ------>MYB83           --------->At4g35610 --------->MYB52(2) --------->At4g35610                <---------MYB52(2)            <---------At4g35610 ----------->GT1    <---------At4g35610              ---------->DOF2     <----------DOF2--------->At4g35610   <-----------GT1 --------->GLK1(2)      ------->TEIL  --------->MYB46(3)        <---------ZAT2     <--------P <----------DOF2   tcttcatgaacatttgcaaagaaccaactttggcatcttttgtagcacagctgctgaacccatttgggtagttatacactttgtgtgagcttctgaccat  23948100               --------->LBD16              --------->DREB2C(2)                       <----------DOF2              --------->DEAR3(1)                      <------NtERF2            --------->MYB52(1)                        <---------At4g35610           <---------ALFIN1                         <---------ZAT18    <------MYB46(1)                           ------>ZmHOX2a(2)    <------MYB83                             <------ZmHOX2a(2)    <---------MYB46(3)                      <-----------ARR10                  --------->ZAT2   <---------MYB46(3)                       <---------AGP1                     <---------ZAT2   --------->MYB111(2)                      --------->ARR11(3)                 --------->At4g35610   --------->MYB55(2)                       --------->AGP1<----------DOF2      <---------At4g35610   <---------AtMYB61                        <---------ARR11(3)            --------->ANAC58   --------->MYB111(1)                      <---------ARR14(2)            --------->ANAC58  <---------MYB55(1)                        --------->ARR14(2)    --------->ARR11(3)  <---------MYB52(1)             <----------DOF2    --------->ZAT18 ------>ZmHOX2a(2) >HVH21 <------NtERF2     <---------CCA1(2)<---------CCA1(2)      <---------ARR11(3)         <-------   agcagttggtggcacaccggcaaaacccataacttctttagacacagatcttagtccgctctttggatgatctaacaagtaagctgcaacttctcttgtt  23948200                                                          --------->At4g35610                                                          <---------ZAT2                                                          --------->ZAT2                                                          <---------At4g35610                                                       --------->HSFC1(2)                                                       <---------HSFC1(2)                                                       <---------HSFB2a(1)                                                       --------->HSFB2a(1)                                                       <---------ZAT2                                                       --------->At4g35610                                            ----------->HVH21                                            --------->bZIP60(1)                                            <---------bZIP60(1)                                          --------->At4g35610   <------ZmHOX2a(1)                    ------>ZmHOX2a(1)     <---------At4g35610 <---------TOE2(3)                   <--        ------>ZmHOX2a(1)        ----------->HVH21  <------ZmHOX2a(1)            <---------MYB46(3) ----RAV1(1)    --------->ARR14(2)<---------WRKY18(1)  <---------At4g35610     <---------MYB52(1) <--   gccccttctcctactctagttcctctcttcaatccctgaccgtctgatgacacaggaagctgctgaggattgttcacagccattggttcttcatccatag  23948300                                                                       ------>ZmHOX2a(2)                                                                     <-----------ARR10                                                                     <---------ARR11(3)                                                                 ----------->RAV1(2)                                                                 =======================RAV                                                                 --------->At4g35610                                                                 --------->ZAT2                                                                 <---------ZAT2                                                        <-----------HVH21                                            --------->CCA1(2)    <---------At4g35610    <----------DOF2           <-------TEIL                    --------->ARR14(2)  =========================RAV          --------->CCA1(2)                <---------ARR14(2)  <-----------RAV1(2)     --------->TOE2(3)         <---------ARR14(2)            <---------At4g35610   <-----------HVH21  --------->ZAT18         --------->ARR14(2)    --------->GLK1(2)       =======================HOX2a_HOX2a -------ANAC58                 --------->ARR11(3)      ------>ZmHOX2a(1)        <---------ZAT18 -------ANAC58                <---------GLK1(2)      ----------->RAV1(2)    <-----------RAV1(1)   gcttgaacacagatacatagttgagacctgaagaatcttgcatcagatatgtccctcctgtcccttcagctgatctcactggtggactacctttgttcaa  23948400                  --------->YAB1               --------->WOX13(1)             --------->WRKY18(1)             ------------>CBF            <-----------HVH21         --------->SPL7        <---------MYB52(1)           ----------->GT1       <---------SPL7--------->ARR14(2)       <-----------HVH21      --------->ARR14(2)      ------->GAMYB  <---------ARR14(2)      --------->DEAR3(1)   --------->HSFB2a(2)     --------->MYB46(3)    <---------HSFB2a(2)     --------->DEAR3(2)  ------>ZmHOX2a(1)        <---------LBD16  --------->MYB46(3)<---------CCA1(2)--------->ANAC55(2)       --------->MYB52(1)       --------->ZAT6 <---------ATHB12<---------ATHB12  <-----------RAV1(2)<-------GAMYB                <----------DOF2   cccatcaaccgtccggtcaatcatatcctcgagaacctcaggtaatttcacatcggggttaagaacaacggctctaacaaggagtctttaccagtagcag  23948500                                                                                           <-------GAMYB                                                                                          <----------                                                                                      <---------GLK1(2)                                                                                     <--------ATHB1                                         --------->ANAC58                            --------->YAB1                                         --------->ANAC58                           --------->ICU4              <---------At5g28300      --------->MYB46(3)          <----------DOF2  <---------ATHB12             <-----------GT1      --------->TOE2(3)               <---------ICU4<---------ATHB12         <----------DOF2       --------->GLK1(1)            <-----------GT1     ------------>CBF   tgtcttcttctcttttcaccgtgtcttccaccgatttcttaaccagcaaatggattacagagtttccatctttacaaatcccatcaatgattctgttgtc  23948600                                       --------->TOE2(3)                 --------->ARR14(2)                        ===========================HOX2a_HOX2a           <---------ARR14(2)                        ------>ZmHOX2a(2)                               <---------MYB52(1)                       --------->GLK1(1)                             ------>ZmHOX2a(2)                       ============================HOX2a_HOX2a       <-------TEIL                       <---------GLK1(1)                            <------ZmHOX2a(2)                       <------ZmHOX2a(2)                           --------->AGP1                ----                      <---------ARR11(3)      --------->GLK1(1)    --------->ARR11(3)  ----------->RAV1(1)                      <---------ARR14(2)    ================================HOX2a_HOX2a------>MYB46(1)                      <---------ARR14(3)    <------ZmHOX2a(1)      <---------ARR11(3)  ------>MYB83                      --------->ARR14(2)    ===============================HOX2a_HOX2a--------->ANAC46                      --------->ARR11(3) <-----------RAV1(2)       --------->ARR14(2)<---------MYB59                      <---------AGP1 ------->TEIL  <---------DAG2  <---------ARR14(2)--------->MYB46(3)                <-----------GT1      -------->P    <----------DOF2<---------GLK1(1) --------->ANAC58   <---------GLK1(2)  --------->ARR14(3) <---------LBD16    <----------DOF2         --------->ANAC58 -RAV1(1)   <----------DOF2     --------->YAB1<---------GLK1(1)   --------->GLK1(1) --------->ANAC46   atcaagcttctctcctttaaacaagatctcttgatcatcaacctcaggaaaccctttaccctctttagagatccgtttcttcaaatacccaacatttcta  23948700                                                                                       ------->GAMYB                                                                                       ==============                             --------->LBD16                <------ZmHOX2a(2)         <---------ALFIN1                            <---------------AGL15           <---------YAB1          ----------->RAV1(1)                            --------------->AGL15          <---------ARR11(3)  ------>MYB46(1)            ------->TEIL    --------->ANAC46               --------->ARR11(3)  ------>MYB83   <------ZmHOX2a(2)       ----------------->AGL1  --------->ANAC58          --------->MYB46(3)  XXXXXXXXXXXXXXXXXXXX>MIR841------>NtERF2         --------->ANAC46         --------->ANAC58       <-  XXXXXXXXXXXXXXXXXXXX>MIR841B                     --------->ANAC58         --------->ANAC58      ---  <---------ARR14(2) --------->ARR11(3)      --------->At5g28300        --------->ANAC58     --------  --------->ARR14(2) <---------ARR11(3)  --------->YAB1   <------ZmHOX2a(1)----------->RAV1(1)------- ----->ANAC46    ---------->DOF2      <---------ICU4  ---------->DOF2   --------->ANAC58--------->ANAC46   cgacgatccacatgaaactgaaagaccttgccgcaagtagtaatcacagtaacaagcaaaggatcatagagcttaagcaccaaatgcaacacactaccac  23948800  Previous    Next  AGI:  At1g64460.1    Description:  phosphatidylinositol 3- and 4-kinase family protein. similar to phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G46500.2); similar to phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G46500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14377.1); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPro:IPR000403) Range:  from: 23947162    to: 23948343    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g64470.1    Description:  ubiquitin family protein. similar to phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G46500.2); similar to phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT2G46500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69528.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 23948385    to: 23949435    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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