Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------DEAR3(1)                            <---------ARR14(2)                                               ------>NtERF2                        <------NtERF2                                                        <------NtERF2                        --------->ATERF1(1)                                                 ---------                        <---------At4g35610                                                 ------>NtERF2                        --------->At4g35610                                                <---------ANAC46                       ------>NtERF2                                                       <---------DEAR3(1)                       ----------->RAV1(1)                                                 <---------ANAC58                       <---------ATERF1(1)                                                 <---------RAP2.6(2)                       <---------RAP2.3(1)                                                 <---------ANAC58                      <---------RAP2.6(2)                 <------ZmHOX2a(1)                <---------ATERF1(2)                      <---------RAP2.3(2)                ----------->GT1                   --------->ATERF1(2)                      --------->ATERF1(2)              <------ZmHOX2a(1)                  --------->RAP2.6(3)                      <---------ATERF1(2)       <------ZmHOX2a(1)                       --------->ALFIN1 ------>KAN4(1)       <---------DEAR3(1)      --------->ALFIN1                       --------->DAG2 -------KAN4(1)     <---------RAP2.3(1)    <---------ANAC46                      --------->At5g28300 ------>ICU4        ------->GAMYB --------->ALFIN1 <------ZmHOX2a(1)            ----------->GT1 ------KAN4(2)    <---------At5g28300     <---------At4g35610                 ------->TEIL--------->ATERF1(1) ->LBD16         --------->MYB52(1)       --------->At4g35610                --------->MYB52(1) -LBD16 --------->GLK1(2)  <------NtERF2 --------->MYB52(1)          ---------->DOF2---------->DOF2   ataatcggagagtctggaataacggcggcagagacggtggagatagcggaggaggaaggaggagaaatagggaaagaatgaacggtaaaagtggcggcca  23946100                                <------NtERF2                               ------>NtERF2                               --------->LBD16                               <---------MYB46(3)                              <---------ANAC46                             <---------MYB52(1)                             <---------LBD16                                           --------->YAB1                           --------->ATERF1(2)                                         <---------ANAC46                           <---------ATERF1(2)                          <---------At4g35610        <---------ETT(1)  <---------LBD16                               --------->At4g35610         -     <---------ARR14(2)  <---------At5g28300                           --------->GLK1(2) --------->ICU4     --------->ARR14(2) <-----------GT1------->TEIL               ---------->DOF2 <---------At4g35610 >RAP2.6(2)      <---------ATHB12<---------ARR14(2)           --------->LBD16     --------->At4g35610   tgtattgaatccgacccgaatcaattttaccggcgggtatgaacataaacccgacttgattacccgaataaagaagctgaatagagctgtcgtaatgaga  23946200             <---------TOE1(3)             <---------TOE2(3)          <---------MYB52(1)                                                                    <----         <-------GAMYB                                                                        -------       --------->ANAC58       <---------SPL7                                                 <-------       --------->ANAC58      <---------ANAC46                                               <--------     ------------>AtMYB77   <------NtERF2                                                  <------NtERF2  --------->ANAC58         ------>NtERF2                                                 <---------DEAR3(1)  --------->ANAC58        --------->DEAR3(1)                                            <---------ORA47(1)  --------->ANAC46        <---------DEAR3(1)                          <------NtERF2<-------GAMYB----- --------->RAP2.6(3)    ------->GAMYB               --------->At4g35610           --------->ALFIN1 -- -------->MYB52(1)   --------->MYB52(1)    <------ZmHOX2a(1)        <---------DEAR3(1)  --------->SPL7   gaaaacggcacggttagggtttctaacggcgacgtactgagagaaggagaagttagcggtattgtttgagacggcgaatgaggggagttggacggcgtta  23946300                                                                                          <------NtERF2                                                                                         ------>NtERF2                                                                                       <------NtERF2                                                                                       --------->RAP2.3(1)                                                                                      <---------RRTF1(1)                                                                                      <---------ERF1                                                                                      <---------RAP2.3(1)                                                                                      <---------ATERF1(1)                                                                                      <---------DEAR4(2)                                                                                      <---------ORA47(2)                                                                                      ------>NtERF2                                                                                     --------->O2                                                                                     <---------O2     ------>ZmHOX2a(2)                                                               <---------RAP2.3(3)    <------ZmHOX2a(2)                                                                <---------RAP2.3(2)   <---------ARR11(3)                                                                <---------DEAR3(1)   <---------ARR14(2)                                                                --------->DEAR3(1)   --------->ARR11(3)                                                               <------NtERF2   <---------ARR14(3)                                                               --------->ATERF1(1)   --------->ARR14(3)                                                              ------>NtERF2   --------->AGP1                                                                  <---------ATERF1(1)   --------->ARR14(2)                                                             ----------->HVH21  <---------GLK1(1)                                                               --------->ETT(2)  --------->GLK1(1)                                                               <---------DEAR3(1) ----------->ARR10                                                              <---------ATERF1(1) -----DOF5.7(2)                                                                 ------>NtERF2 -->DOF5.7(2)                           --------->ANAC46                       --------->ALFIN1 ---DOF2                                <----------ID1                         <---------DEAR3(1) -ANAC46                        <---------ZAT14                             <---------DEAR3(1)  ----- ---->MYB52(1)     <<<<<<<<<<MYB80    <---------DOF5.7(2)     <---------At4g35610--------->ATERF1(1) ----->GAMYB  <----------DOF2   --------->ZAT14               --------->At4g35610<------NtERF2  -----   acggagatcttggggtcttttggtttgaagactgtgaagtaaacgacaaggagaacaacgagtaagatgagtaagaagacggtggcgacggcgcaagaag  23946400                         <------NtERF2                        ------>NtERF2                       --------->DEAR3(1)                       <---------DEAR3(1)                  --------->MYB52(1)                  --------->ARR14(2)              <------NtERF2   ------>ZmHOX2a(2)             --------->LBD16 <------ZmHOX2a(2)            <---------ATERF1(2)            --------->HSFB2a(2)            <---------HSFB2a(2)                                                  <---------ANAC46            --------->ATERF1(2)      <---------ANAC58                            <---------ANAC58 ------>GT1<---------LBD16  <---------ARR14(2)   --------->ETT(2)                <---------ANAC58 ---->At4g35610   <---------ARR14(2) <---------ANAC58 <------ZmHOX2a(2)--------->ATERF1(1)   ctaaattagttctgccggaagaacggcgacgatcgtgaggcttggccattgtcgagatcgaagagtgtttggagacgacgatagcgttgaaaccgagaca  23946500                                                                                  --------->ANAC58                                                                                  <----------ID1                                                                                  --------->ANAC58                                    --------------->AtSPL8                        --------->ANAC46                                    <---------------AtSPL3                     <---------SPL7                                    --------------->AtSPL3                   <---------------AtSPL3                                   <---------ZAT14                           --------------->AtSPL8                                   <-------TEIL                         <------------CBF                                 --------->ZAT18    --------->DAG2    --------->AHL20(2)            -                               <---------------AtSPL3                 <---------AHL20(2)      -------         *TSS   ---------->DOF2<---------------AtSPL8             --------->ICU4 --------->SPL7     <      --------->ALFIN1 <---------ANAC46            ---------->DOF2--------->AHL20(2)         <-------   ctgtgagagtgtgagtgagaaagtagagtagagagggtacagtacttcaaactaaaagcgagagagcatttattaattgtctgtacgacaaacaaatcat  23946600                            <---------YAB1                         <---------AHL20(1)    ------>ZmHOX2a(1)    --------->AHL20(2) -------->ARR14(2)       --------->AHL20(1)           ----------->GT1 -->YAB1                 <---------AHL20(2)   ---------->DOF2                           --------->ARR11(3) ---------ARR14(2)  <---------YAB1           --------->YAB1                             <---------ARR11(3) --ATHB12         <-----------GT1           <---------YAB1                             --------->YAB1   caaatccttccttcacttcattaccattttattaatagacttaactataaaagtttcagtaaatttgtagattagattgttttgacaaatgatattgtcg  23946700                   <---------At4g35610                                     --------->YAB1                   --------->At4g35610                     <---------AHL20(2)                   <---------ZAT2                    <---------ANAC46  <---------RVE1(1)               --------->ANAC46                      <---------ANAC58 --------->ARR14(2)             <---------ALFIN1                   <----------DOF2       --------->ARR11(3)          ---          <-----------GT1                     ---------->ID1        ----------->ARR10       ---------    <---------AHL20(2)           <---------ATHB12    <---------ANAC58 <---------ARR11(3)    ---------    --------->AHL20(2)         --------->YAB1<-----------GT1   --------->YAB1               <--------   <---------WOX13(1)          --------->WOX13(1)   ---------->ID1---------->DOF2           <--------   agttgattaatttcaccactcagcttattgcattaatcaagaatgtttttctttttcgtatttaatgagaaagatattcaaaattagaaatacaaggttc  23946800                                                   ----------->GT1         <---------ARR11(3)                      <---------At4g35610     <---------ANAC55(2)                      ---------->DOF2     --------->ANAC55(2)                  <------MYB46(1) <-----------HVH21                        <------MYB83 ------->DOF2                            --------->MYB55(2)                         <---------AHL20(2) >HSFC1(2)          <---------ANAC46     <---------MYB46(3)                       <----------DOF2 >HSFB2a(1)   <----------DOF2           --------->ALFIN1                   --------->CCA1(2) -HSFC1(2)    <---------DAG2         --------->ATHB12   ---------->DOF2   --------->ARR14(2)--------- -HSFB2a(1)------>ZmHOX2a(2) <-----------GT1----------->HVH21           ----------->ARR10   ---------   caaagtcacatgatccctttttttgtgtatttttccacatgagtgggtgaaagctgtttaaagtccaattcagtgagatttgctcttttattgcaagcct  23946900                                                                                                   --                           --------->ZAT14                                                        ---                           <---------ZAT14                                                       ----                           <---------ZAT18                          ---------->DOF2             <----                         --------->ANAC46       <---------ALFIN1--------->ZAT6                  -----                       <---------ALFIN1       ------>ZmHOX2a(2)<---------YAB1                  <-----                      <---------ZAT14  <<<<<<<<<<MYB80       --------->YAB1                   <------                      --------->ZAT18 <------MYB46(1)        <---------ICU4                 <-------- >ANAC58            <---------ZAT18   <------MYB83        --------->YAB1                 ------------ >ANAC58       <---------AHL20(2)    --------->MYB59     --------->ICU4              ---------->DOF2   tgtattagagaaattgttttattgcacactgcagtaagtttggtttgatcccacttgcaaaaattatcactaaagcgaaaatgacacaaatgcccatccg  23947000  Previous    Next  AGI:  At1g64450.1    Description:  proline-rich family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G23930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69529.1); contains InterPro domain Cell surface antigen (InterPro:IPR004829); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 23945261    to: 23946509    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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