Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <------NtERF2                            <---------ATERF1(1)                            --------->ABI4(1)                    =================bZIP_DOF                            <---------RAP2.6(3)                  <---------O2                            ------>NtERF2                        --------->TGA1a                           <---------ATERF1(2)                   =================bZIP_DOF                           --------->DEAR3(1)                    <---------TGA1a                           --------->ATERF1(2)                   --------->O2  <----------DOF2                   <---------ALFIN1                --------->ATHB12    <----------DOF2                 <---------At5g28300    ===================================bZIP_DOF                <-----------GT1         ---------->DOF2    --------->ZAT6  ---------->ID1     -------           <-------TEIL    --------->RAP2.6(2)    <-------TEIL   --------->ANAC55(2)     <-----------GT1   gaatgtaaacacattcatttaccaccttgccgcccctatgtgaaaagaaagattcatgggaacactcacatgactttgttccttttcattttttcttcat  23914400                    --------->HSFB2a(2)          <---------YAB1        -------->ATHB1                                                                     <---------ICU4        <---------ICU4                                            <---------MYB52(2)       --------->YAB1       --------->AHL20(2)                                   --------->WOX13(1)     --------->YAB1       <---------AHL20(2)                                --------->ANAC58        --------->AHL20(1)       --------->ICU4                                    --------->ANAC58       --------->YAB1       <---------ATHB51             --------->ICU4      --------->DAG2        --------->AHL20(2)    <---------AHL20(1)           <---------YAB1        ---------->DOF2       --------->YAB1<--------ATHB1    <---------AHL20(2)     <---------YAB1         <---------------AGL15      --------->AHL20(2)    --------->AHL20(1)  <---------ARR11(3)        --------------->AGL15   --------->YAB1   --------->ATHB51    --------->AHL20(2)  --------->AHL20(1)        ------>ZmHOX2a(1)  <---------TOE2(3)    --------->ICU4   --------->AHL20(2)   --------->ARR11(3)       ----------------->AGL3--------->TOE2(3)  <---------YAB1 -->YAB1--------->YAB1  <---------AHL20(1)   --------->GLK1(1) --------->AHL20(2)--------->AHL20(2)   aactaataaattattatttcttccaaaatattgttgtaattactctgagttcctacaaaaagcaattaactaacattaataaaaataatagaataattgt  23914500                       --------->LBD16                     <---------LBD16                <---------YAB1              --------->ATHB12             <---------YAB1                    <---------AHL20(2)          <---------AHL20(2)                   --------->AHL20(2)       <---------AHL20(2)                <---------At4g35610       --------->AHL20(2)                ----------->RAV1(2)                --------->ARR11(3)      <---------AHL20(2)               <---------ALFIN1                     --------->GLK1(2)      <---------AHL20(1)            <-----------GT1 <-----------GT1         <---------ARR11(3)      --------->AHL20(2)     <-----------GT1  <---------WOX13(1)    ---------->DOF2---------->ID1   ttttgtaattaatttatgattaatgcggaagtcacaattttccacctgattaattaacaaaattttctatcaaagaaaaatctttgtcttaaacgtatac  23914600                                        --------->ANAC46                                    ---------                                        --------->ANAC58                             --------->AHL20(2)                                  ---------->DOF2                                --------->ICU4                             <---------ALFIN1      --------->DAG2             <---------ATHB12        ------->TEIL        ------>MYB83--------->ANAC55(1)          --------->YAB1  <---------AHL20(2)        <-------TEIL     --------->MYB46(3)        --------------->AtSPL8     <---------ATHB51    <---------------AtSPL8  ------>MYB46(1)        <---------------AtSPL8--------->ANAC46 --------->YAB1    --------------->AtSPL8  -------->P  --------->ANAC58    --------->ANAC55(2)--------->YAB1    <---------------AtSPL3 ----------->RAV1(1)    ---------->DOF2   <---------YAB1--------->YAB1    -    --------------->AtSPL3--------->AtMYB61   --------->AHL20(2)  --------->YAB1 <---------YAB1   <--   atagatgatgtacatttcaaaatttcgaccaacacttaaaacacgaaataaaaaaagtactcacttgataatcatactcaataataataaaatcaaaagg  23914700                                                       ---------->DOF2                                                  <---------AHL20(2)                                                 --------->AHL20(2)                                                 <---------AHL20(2)                                              <--------HAHB4                                      <--                    <---------ICU4            --------->YAB1                                   ------                    -------->HAHB4         --------->YAB1                                   ------>MYB46(1)                    --------->YAB1     --------->AHL20(2)          <<<<<<<<<WRKY18          ------>MYB83              --------->YAB1           <---------AHL20(2)        <-----------HVH21        <---------MYB59          <---------AHL20(2)           --------->AHL20(1)      <------------AtMYB77      <---------HSFC1(2)          --------->AHL20(2) ---------->DOF2 <---------YAB1  --------->MYB52(1)          <---------HSFB2a(1) ->DOF2--------->YAB1 <---------YAB1  <---------AHL20(2)  --------->At4g35610            --------->HSFB2a(1) ---------->GT1    --------->ICU4     --------->AHL20(2)  <---------At4g35610       --------------->AtSPL8 -------GLK1(1)  --------->YAB1 ----------->GT1--------->TOE2(3)------->GAMYB     *TSS   --------->HSFC1(2)   aaatgtgaataataaaacataataatgaatgaaaaggaaattaaattatcattaaatgaaagctaactgtcaaaaatttctgtctcttggtaccttcctg  23914800                               <---------ANAC55(2)                            <------ZmHOX2a(2)                           <---------ARR11(3)                  --------------->AGL15                  <---------------AGL15                           <---------ATHB12                 --         ------>ZmHOX2a(1) --------->ARR11(3)                    ------>MYB83  <<<<<<<<<TBF1      ---         ==========================HOX2a_HOX2a                   ------>MYB46(1)                  ---     ==============================HOX2a_HOX2a                  --------->WOX13(1)                ---     ------>ZmHOX2a(1) ---------->DOF2                         --------->MYB46(3)               <---- --------DOF2    <-----------------AGL2                        --------->AtMYB61     ------>ZmHOX2a(1) >ZmHOX2a(1)     ----------------->AGL3  <---------CCA1(2)  <-----------GT1 <<<<<<<<<TBF1   ------>ZmHOX2a(1)   ctttctccttcctctcatttccatataaagatcacttaagctcgtctcttcgtcttcacaaatcaccaatccatcttcttcttcttcctctctccttctc  23914900                                                           <---------MYB52(1)                                                          --------->LBD16                                                          ------>NtERF2         ------>ZmHOX2a(1)                               --------->ANAC46    <----------DOF2                              ------>ZmHOX2a(2) <---------ALFIN1                              --------->ARR14(2) ---->NtERF2                                   <---------ARR14(2) ------>ANAC46                             <---------At4g35610 --->NtERF2       --------->At4g35610      --------->At4g35610                           --------->AtLEC2 ------>LBD16     --------->ZAT14    <----------DOF2    <---------LBD16                  XXXXXXXXXXXX -----LBD16       <---------At4g35610<---------DAG2------>ZmHOX2a(1)        <----------DOF2   cggccactttcctcactctctgctctccctatatcagcgctttttagctgatcctctctccggcatttctctctctctcttttttttagccatggagaaa  23915000                  <---------MYB52(1)            <---------ZAT14                         <---------LBD16            --------->ZAT14                    <----------DOF2            <---------ZAT2                    <---------ANAC58         --------->ANAC58            --------->ZAT2                    <---------ANAC58<---------YAB1         <---------At4g35610                 <---------At4g35610    --------->WRKY18(1)      <-----------HVH21                      --------->At4g35610 <---------YAB1     <-----------RAV1(1)                   <--------P         --------->ICU4     ----------->HVH21                    <---------MYB52(1)<---------ICU4   ----------->RAV1(2)                   --------->LBD16--------->WRKY18(1) <----------DOF2  ------>NtERF2  <-----------HVH21      <---------HSFB2a(2)<---------YAB1--------->ARR11(3) <---------RAP2.6(2)                    --------->HSFB2a(2)--------->ICU4<---------ARR11(3) XXXXXXXX>MIR861-5P <---------At5g28300<---------LBD16--------->LBD16  --------->ANAC58   tttgcgcctgtcgctgctctgttactgcttcttctctgttttccggtagctttctccggtcatgattatggtcaagctctttccaagagtcttctcttct  23915100                                                                              ---------->DOF2            ------>ZmHOX2a(2)                                                <---------ATHB12            ====================HOX2a_HOX2a                                 ----------------------->TaNAC69(2)           --------->CCA1(2)                                            --------->At5g28300           <------ZmHOX2a(2)                                            <------NtERF2           =====================HOX2a_HOX2a                            ------>NtERF2          --------->ARR14(2)                                          --------->ATERF1(2)          --------->ARR11(3)              --------->TGA1a             <---------ATERF1(2)          --------->AGP1                  <---------TGA1a            --------->RAP2.6(3)          <---------AGP1                  <---------O2              --------->MYB52(1)          <---------ARR11(3)          <-----------HVH21            --------->DEAR3(1)          <---------ARR14(2)     ---------->DOF2                   ----------->HVH21 <---------ANAC46         --------->GLK1(1)       ===================bZIP_DOF       --------->At1g77200<---------SPL7         <---------GLK1(1)     --------->MYB46(3)                 --------->MYB46(3) <---------ANAC58  <---------ZAT2          --------->ANAC46--------->O2  --------------------->WRI1   <---------ANAC58  --------->ZAT2          --------->TOE1(1)     <---------ZAT18   --------->DEAR3(2)<------NtERF2  --------->At4g35610     --------->TOE2(1)   ---------->ID1   ----------->HVH21  <---------DEAR3(1)  <---------At4g35610    ------>ZmHOX2a(1)===============================================bZIP_DOF   tcgaagctcagagatctggtgttcttcctcgtaaccaaagagtcacttggcgctctcactccggtctcaccgacggcaaatcaagcggcgtatgtctctc  23915200                              --------->ANAC46                    --------->ARR11(3)                                                              -                    <---------ARR11(3)                                                              <                    <---------GLK1(2)                                                               <                 <---------HSFB2a(2)                                                                -                 --------->HSFB2a(2)<-----------RAV1(1)                                             <             <----------DOF2  <---------ETT(1)                                      ----------->GT1 -   cctctctgtctctctctttctagattttgtttccgacattgttgctctgttttccacttgattttgagtttattcagacaacatttcagtaaattagcta  23915300  Previous    Next  AGI:  At1g64390.1    Description:  ATGH9C2 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C2); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 6 precursor [Arabidopsis Thaliana] (GB:Q42059;GB:Q8H160;GB:Q9C7W3); similar to ATGH9C3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C3), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT4G11050.1); similar to cellulase [Fragaria x ananassa] (GB:AAC78298.2); similar to endo-beta-1,4-glucanase [Fragaria x ananassa] (GB:CAB43938.1); similar to endo-beta-1,4-glucanase [Fragaria x ananassa] (GB:CAC94006.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPr Range:  from: 23914782    to: 23918892    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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