Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                              -------                                                                                       ------->TEIL  <---------YAB1                                         <---------MYB59            <---------YAB1 --->YAB1                               --------->HSFB2a(2)                       --------->YAB1 ---- ---YAB1                       --------->ANAC46         --------->ANAC55(2)      <---------YAB1  ---- >YAB1                   <---------AHL20(2)             <---------ANAC55(2)    --------->YAB1 <------ >ATHB12        --------->AtLEC2     --------->ICU4   <-----------GT1          <--------HAHB4<------- -ICU4     <----------DOF2    ---------->DOF2--------->ICU4  --------->ZAT6   <---------YAB1 --------   tagtctcattgtgctttcatgcagtatttatacaaagcacttatggaatgagtatgttacataactctacctatacttctattattatgaacatattaat  23892200                                                                       --------->AtMYB61                                                                  <---------ALFIN1                                                                  --------->AtMYB61        ----------   <---------AHL20(2)                                            --------->ANAC46      <---------AHL20(2) ------AHL20(2)                                                --------->ANAC58        --------->AHL20(2) -->YAB1                                                       --------->ANAC46        --------->AHL20(1) ----->AHL20(2)        <-----------GT1                         <---------ALFIN1       <---------AHL20(2) ----->YAB1         <----------DOF2                  <-----------GT1--------->ANAC46  --------->AHL20(2) ---ICU4 ---------->DOF2                          ----------->GT1--------->ANAC58  --------->AHL20(2) --AHL20(2)  --------->TOE1(3)        --------->CCA1(2)        --------->ANAC58 --------->YAB1<------ ->AHL20(2)  --------->TOE2(3) <---------ZAT6     --------->YAB1 --------->ANAC58 --------->AHL20(2)   tatatataaaaaaaagcttaatcttttacaatactgtaagagatgagaacaattgtaacaattccacaccacaccaaaacaaaaataaaaaaattgtaac  23892300                                                                      --------->ATHB51                                                                      --------->ATHB12                                                                  <-----------------AGL3                                                 --------->ARR14(2)  <---------YAB1                                <---------YAB1   --------->GLK1(2)<-----------------AGL2                              --------->YAB1     <---------ARR14(2)<---------------AGL15     ------->MYC3            <---------ATHB12   <---------GLK1(2) ----------------->AGL3           --     <-------MYC3            --------->ICU4 ---------->DOF2       =================================== ->GT1             --------->HSFB2a(2)   ------->TEIL  ------->TEIL--------------->AGL15   <---------WOX13(1) -----GT1          <---------HSFB2a(2)<---------YAB1  <---------CCA1(2)            --------->GLK1(2)   aattccacatgttatagtcttctagattgcaatgatcaatatgaatcaaagaatctgaatcttggacacctataattgggaaccaattctgtaattgaca  23892400           ---------->DOF2                                                                       <---      <------MYB83                                                                         --------->ANAC58      ----------->GT1                                                                <------ZmHOX2a(2)      <------MYB46(1)                                     ---------->DOF2           --------->ARR11(3)      <---------ANAC55(2)                         --------->TOE2(3)                 <---------ARR14(2)     --------->MYB111(1)                          <----------DOF2                   <---------ARR11(3)     --------->MYB59                              --------->TOE1(3)                 --------->ARR14(2)     --------->MYB46(2)                      <---------MYB59                        --------->AGP1 ------------->AGL15                        <---------At4g35610                    --------->At4g35610 ==============MADS_MADS                    --------->At4g35610             ---------->DOF2--------->ANAC58   tccaagttaggtaaaaagaaaatgccattcgaattgattcaattttagctaactttaaactaaagaacaatttcaagataaagacagatccactagcaaa  23892500                                                                                     ----------->RAV1(1)                                                                                   *TSS                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                           --------->ARR14(2)                    <---------At4g35610                                   --------->GLK1(1)                   --------->ANAC46        ----------->GT1            --------->ANAC58            <---------AHL20(2) --------->YAB1                         --------->ANAC58              -      --------->STY1(2)       <---------YAB1   ----------->TBP        --------->ANAC46              - ------REM1(1) <---------GLK1(1)      ------------>CBF      ---------->DOF2<---------ARR14(2)    ----   tgtagcctagctatttgatttcagcaactcttatgaaaatatcaatagtatatatagacatcaaaagctcatacgaaaatccacaaacaacacaaataca  23892600                                                                                      --------->YAB1                                                                                --------->ANAC58                                                                             <---------WRKY38(1)                                                                    <------NtERF2------->GAMYB                                     --------->ANAC58           --------->ZAT2  --------->ANAC46                                     --------->ANAC46           <---------bZIP60(2)  <---------ATHB12   --------->AHL20(2)        --------------->AtSPL3          <---------TOE1(1)  --------->ANAC58 -------->TOE1(3)           --------->ZAT14       ---------->DOF2 --------->ALFIN1   --------->ICU4 -------->TOE2(3)           <---------ZAT14<-----------------------TaNAC69(2)<---------WRKY12 ----->ANAC46    <----------DOF2     --------->ANAC58        <---------TOE2(1)--------->MYB52(1)   aaccataaaatcacatcttctttacaacaatgcagtactacgaaaaccgtgagaaagactactacgaggtggctcaaggccaacgcaatggttatggcca  23892700                                                 --------->CCA1(2)   <---------MYB52(1)                                                --------->ARR14(2)   --------->ALFIN1                                                <---------ARR14(2)  <-----------HVH21                                             <---------ANAC46      ------->GAMYB                                          --------->ALFIN1      --------->MYB52(1)                                        <---------ANAC58        <---------ARR14(2)                      --------->CCA1(2) <---------TGA1a         --------->ARR14(2)                     --------->ARR14(2) <---------ANAC58    <-------TEIL                     <---------ARR14(2) ===================================MYC_MYB               <---------O2             <---------ANAC46   <------ZmHOX2a(2)                 <-------               --------->O2             <---------O2      --------->AGP1  <-------GAMYB   --------->ALFIN1             =====================================MYC_MYB <---------ARR11(3)              <---------MYB52(1)             ------->GAMYB             <-----------------------TaNAC69(2)----------->GT1 <-----------HVH21            --------->MYB46(3)       --------->ARR14(2)   --------->ARR14(2)     ----------------->AG         --------->MYB46(3)          <---------ARR14(2)   <---------ARR14(2)   <-----------GT1   ----   gagccagagccacaaccacgagggatatggccagagccagagccgtgggggatatggccagatccataaccgtgagggttataaccaaaaccgtgaggga  23892800                                                                <------MYB83                                                               --------->MYB55(2)                                                               <---------MYB46(3)                 <------NtERF2                                <---------MYB55(1)               --------->DEAR3(1)                --------->MYB52(1)     --------->ATHB12      --------->ANAC58                          <---------ALFIN1<------MYB46(1)      --------->ANAC58 --------->ARR14(2)      --------->MYB46(3)    <---------ANAC58    ---------->DOF2    <---------ARR14(2)<----------DOF2      --------->ALFIN1                    --- --ANAC46   <---------GLK1(2)   ---------->CDC5<---------MYB55(2)    <---------ANAC58        <------- ----->CCA1(2)--------->ATERF1(1)     <---------ALFIN1     <---------DEAR3(1)          ----------->GT1   tatagccaaagccagagtcgcccagtatatgggcttagcccgactttgaaccaccgtagccacggtgggtttcttgatgggctcttcaagggtcaaaatg  23892900                         ------->MYC2                         ------->MYC3                         <-------MYC3              --------->ZAT18              <---------ZAT18                                                   <---------ARR11(3)             --------->ALFIN1 --------->HSFB2a(2)                               --------->ARR11(3)      <-----------HVH21  <-------MYC2                                          <---------At4g35610   --------->DAG2       --------->ANAC58                        --------->WRKY18(1) ---------->DOF2        --------->ANAC58             ----------->GT1    --------->TOE1(2) -------------->AGL1   <-------TEIL ----------->RAV1(1)   ---------->DOF2     ----------->ARR10 --ICU4    ----------------------->TaNAC69(2)       ----------->GT1  <------ZmHOX2a(1)    -----------   gccaaaagggtcagagtgggctaggcacgtttctagggcaacacaagagccaagaggctaaaaagagtcaaggacatgggaagctcttggggcaacatga  23893000                                                          --------->YAB1               --------->ZAT18                                                     <---------TOE2(3)                 <---------At4g35610                                                    --------->YAB1                     --------->At4g35610                                               <-------TEIL                      --------->DAG2                                            --------->KAN4(1)                   ---------->DOF2                                            <---------HSFB2a(1)               <------ZmHOX2a(1)                               xxxxxxxxxxxxxxxx>smallRNA(si3)              <------ZmHOX2a(1)                         <---------ZAT18   <---------KAN4(2)           --------->TOE1(2) >RAV1(1)          --------->MYB52(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->TOE2(2)         >>>>   ccagaagaaaactcatgagacaaacagtggtcttaatggccttggaatgttcattaacaatggtgagaagaaacataggaggaaaagtgagcacaagaag  23893100  Previous    Next  AGI:  At1g64360.1    Description:  unknown protein Range:  from: 23891533    to: 23892196    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g64370.1    Description:  unknown protein Range:  from: 23892583    to: 23893324    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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