Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <------ZmHOX2a(2)                                                       --------->ARR11(3)                                                       --------->ARR14(2)                                                       <-----------ARR10                                                       <---------ARR11(3)                                                      ==============================HOX2a_HOX2a                          ------>ZmHOX2a(1)         --------->LBD16          ------>MYB46(1) =====================================HOX2a_HOX2a          ------>MYB83    <----------DOF2          <---------LBD16                           --------      >>>>>>>>>>MYB80--------->YAB1           <---------ARR11(3)                            <--------  ===============================HOX2a_HOX2a  --------->ARR11(3)                      ---------->DOF2  <------ZmHOX2a(2)  <---------ICU4         <---------TOE1(3)                    <---------ALFIN1 -------WOX13(1)    <---------ATHB12        <---------TOE2(3)                <------ZmHOX2a(2) ----->HVH21      --------->YAB1     <---------TOE1(2)<------ZmHOX2a(1)     <---------ARR11(3)     --   atggatcaaaccaaatagattaatcatccttttcaattgcaggtttaaggtctccaggatcatcgcctataaaaccgagatcaacacctaaagtatcatc  23869300                                 --------->ANAC58                                 --------->ANAC58                               ---------->DOF2                            ----------->RAV1(1)                          --------->At4g35610                              <---------At4g35610                         --------->RAP2.6(2)                               --------->At4g35610                       <---------At4g35610                               --------->ZAT14                       --------->At4g35610               <----------DOF2 <---------ZAT18 ->YAB1                --------->ZAT2                  <---------ANAC58  --------->ZAT18 -YAB1 <-------TEIL   ----------->RAV1(1)              <---------ANAC58  <---------ZAT14   <---------ANAC46 ------->ZAT6       --------->At4g35610      --------->CCA1(2)    ------>ZmHOX2a(1) --------->AtLEC2<   accactaagtccatttggaagaagcagcagcaacaaagcaaacaaggatacaagattgcctttgagtcctatgagtccactgagccatggaagacgtaga  23869400                                                                                  ---------->DOF2                                                                             --------->MYB52(1)                                                                           <---------MYB52(2)                          --------->ZAT2                             --------->YAB1           ------>ZmHOX2a(1)                                         --------->TOE1(3)  --------->MYB52(1)      <---------At4g35610                        --------->TOE2(3)           ---- ------->GAMYB            --------->At4g35610 --------->ANAC46     --------->GLK1(2)         <------- ---------MYB52(2)  --------->GLK1(2)<----------DOF2              <---------GLK1(2)--------->DAG2----   caactaactggtcctgcttcagactctgagcttacatagctttgaaacacacatcgtggttttttcaagaatcttaaactaacaaaaagttttcagagtt  23869500                                                                              <---------GLK1(2)                                                                            ----------->ARR10                                                                            --------->MYB52(2)                                                                          <---------MYB52(1)     <---                                                                     <----------DOF2             ---- ----->MYB52(2)                            <---------AHL20(2)       <---------ANAC58           ------ --ZAT6        <----------DOF2      <-----------GT1                 <---------ANAC58        <-------- ----->MYB59   <---------DAG2  <----------DOF2          ----------->GT1  --------->TOE2(3)  ---------   agttcccataacatacccttttttgtctaacctctttaataccattttttttttgtatgtgtaaaattttgctttcgttagatacttctctctaagcttc  23869600                                                              <---------TOE2(2)                                                              <---------TOE1(2)                                                             ------>ZmHOX2a(1)                                                        --------->GLK1(1)                                              --------------->AGL15                       <----------DOF2       ----------------->AGL1                       <---------DAG2        <-----------------AGL1               <---------------AtSPL8        <-----------------AGL3                                 <               --------------->AtSPL8        ----------------->AGL2                                 <            <---------YAB1 ---------->ID1    ======================================================== ------HSFB2a(2)   ------->TEIL              ----------------->AG                       <------------CBF ----->HSFB2a(2)  <-----------GT1            <-----------------AGL2                    --------->ATHB12 --->At4g35610<------------CBF               <-----------------AG                    <---------TOE2(3) -HSFC1(2)  <---------AHL20(2)         <----------DOF2  <---------GLK1(1)           ---------->DOF2 < >HSFC1(2) --------->AHL20(2)  <----------DOF2<---------------AGL15                --------->AHL20(2)   tgcaagttcacatttttattgtaccctttttcgccttaagtctttattccgattttggaactcctatgttcgaagttttgctcgattaaagattggattt  23869700                                 <---------ANAC55(1)                                 --------->ANAC55(2)                                 <---------ANAC58                                 <---------ANAC46                                 <---------ANAC58                         ------------>AtMYB77                         --------->ANAC58                                                          <-       --------------->AGL15  --------->ARR14(2)                                               <-----      ----------------->AGL1  <---------MYB52(1)                                            <-------TEIL      <-----------------AGL1  <---------ARR14(2)                                         <---------At4g35610   --------->WRKY12      --------->ANAC46                                                --------->ZAT2 ---------ANAC46         --------->ANAC58                  <------ZmHOX2a(1)             --------->At4g35610 ---------ANAC58      --------->DEAR3(1)                  ----------->GT1               --------->GLK1(2) ======================MADS_MADS <---------ANAC55(2)<---------ZAT14                    <---------GLK1(2) ---------ANAC58  <------NtERF2  <---------YAB1     --------->ZAT18                 <---------HSFB2a(2)   ttgcgtttacctgtaatggcctcgcagacgcagttacgtttgattatctatgagttcacgaggaaaattcaaacgagattgaatacccagaagctgcata  23869800                                                                                          -----------                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                        --------->GLK1(2)             --------->At4g35610                                                       --------->ARR14(2)             --------->ZAT2                           ------>NtERF2               <---------GLK1(2)          --------->ARR14(2)                         ----------->HVH21--------->ANAC46                        <---------ARR14(2)                       --------->ANAC58   --------->ANAC58                        --------->ARR11(3)                       --------->ANAC58   --------->ANAC58                       <---------CCA1(2)    <-----------GT1    --------->ANAC46--------->ANAC46<---------ARR14(2)    ------>ZmHOX2a(2) ---------DOF2       <---------ANAC58 <---------HSFB2a(2)                  <---------ARR11(3) ----CCA1(2)         <---------ANAC58 --------->HSFB2a(2)                  --------->ARR11(3)   gctttgttaccaagtccaaactcgcgcgcgacccatatttcgcgacgcaacttgccagattctatgcgttaaacgatgatcttatatctgctcgcaaact  23869900                 <---------ZAT14            --------->LBD16            ------>ZmHOX2a(1)       --------->GLK1(1)                                                <-----------GT1      ------->TEIL                       <---------YAB1   ---------->DOF2             <-----------GT1 ------------>TaNAC69(2)     <----------DOF2          <---------YAB1   --------->AHL20(2)   gttcgacgtatttcctgagagaagtgttttcctttggaactctattattcgagcttatgctaaagctcatcaatttactactgttttgtcactcttctct  23870000                                                         <----------DOF2                                                    <-------PIF5                                                    ------->PIF5                    <---------ARR11(3)      <---------ANAC58           <---------YAB1                   <---------ANAC58           <---------YAB1      <---------ANAC58                  <---------ANAC58<---------ANAC58      <---------ANAC58                  <---------ANAC58<---------ANAC58     ---------->DOF2    -----   caaatactgcgttctgatacaagacctgataacttcacctatgcgtgcttagctcgtggcttttcagagagttttgatacaaagggactgagatgtattc  23870100                                                        ---------->DOF2                     ---------                                                   --------->ICU4                           ---------                                               <---------ZAT18                          --------->ANAC58                                               --------->ZAT14                          --------->ANAC58                                               <---------ZAT14                   <---------YAB1 ---->ATHB12                          <-----------RAV1(1)           ---------->DOF2   ---------->DOF2   atgggattgcaattgtgtctggtcttggttttgatcaaatttgtggcagtgcaattgttaaagcttattcaaaagctggacttatcgttgaagcaagtaa  23870200  Previous    Next  AGI:  At1g64300.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G41730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60248.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65837.1); contains InterPro domain Protein of unknown function DUF1221 (InterPro:IPR010632); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 23866758    to: 23869708    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g64310.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G18750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64266.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 23869716    to: 23871374    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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