Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <------MYB46(1)                                  -------->P                                    <------MYB83                                  ------>MYB46(1)                             <--------P                                  ------>MYB83                                =======================                            <---------ARR14(2)                ----------->HVH21 <---------MYB46(3)                            --------->ARR14(2)              ----------->RAV1(2)<---------AtMYB61                           <---------GLK1(1)        <---------AtMYB61       --------->ATHB12                      <---------ATHB12<-----------HVH21  ----------->HVH21  <---------MYB46(3)        <---------At5g28300--------->GLK1(1)      <----------DOF2           --------->MYB55(2)  <---- ----TEIL             ----------->HVH21          <---------ANAC58      --------->ZAT14          ----- ---->GT1        --------->ANAC46<---------ALFIN1<---------ANAC58      <---------ZAT14          -----   tcaatccgattaccgctaaacccaatgacatatcccaacccttcacttctggctttggtatgacctgatactgtttagtggttggtttgaagactatgta  23861800      <---------AtMYB61   ----------->HVH21  <-------PIF5  ------->MYC2  ------->PIF5  <-------MYC2  ------->MYC3                                                                --------->ALFIN1  <-------MYC3                                                             --------->LBD16 --------->ANAC46                                                         <---------ANAC58 --------->ANAC55(2)                                                      <---------ANAC55(1) <---------TGA1a                                                     <---------ICU4 --------->TGA1a                                                    <---------YAB1 ====================================bZIP_DOF                   <----------DOF2 --------->bZIP60(2)                                   --------->HSFC1(2) <---------ANAC58 <---------O2               --------->ANAC58           <---------HSFC1(2) <---------ANAC46 --------->O2             ---------->DOF2  <---------ANAC46    ------>ZmHOX2a(2) ==========MYC_MYB     --------->ZAT6      <---------ANAC58  <---------ARR11(3)     ---------->DOF2 -----ARR14(2)    --------->ANAC46<---------ARR11(3)  --------->ANAC58    <---------LBD16 ---->ARR14(2)    --------->ANAC55(2)      <---------ANAC58  --------->ARR11(3) <------NtERF2 -->TEIL    <---------ANAC46--------->ANAC58          --------->ANAC58   <---------LBD16           >>   tccacgtgatggttttgtatacttaacacaaagcaatatcccatgacttgcatcacaagcttcgatctttatcattccgggtggcagaaagtcgatggag  23861900                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                              -------                                                                                             <-------                                                                                       --------->LBD16                                                                                      --------->LBD16                                                        ------>ZmHOX2a(1)             --------->ANAC46                                                        <----------DOF2              --------->HSFB2a(2)                                                     ---------->ID1               --------->ARR14(2)                <-----------GT1                  <---------ANAC58                 <---------ARR14(2)         ----------->GT1                         <---------ANAC58       <---------ANAC46    <-------- >>>>>>>>>>>>>>>LFY   ------>ZmHOX2a(1)         <-------TEIL         <---------ZAT6  <---------HSFB2a(2)   actccattgttttgtaaatcactcctctcatggacaaaactggttcgaagttcgtgtccttttactatgtagtgttgtatgaagtatcccgaaatacgat  23862000                                                 <---------ZAT18                                  ---                                             ============================RAV                 <------NtERF2     <---------TOE2(3)                       <-----------RAV1(1)                          <---------LBD16 -------MYB46(3)                      <---------ANAC58                                   ------>NtERF2 ----MYB46(1)    <---------WOX13(1)   <---------ANAC58          <------ZmHOX2a(1)        <---------RAP2.3(1) ----MYB83    <---------YAB1         <---------HSFC1(2)        <---------At4g35610      --------->ANAC46 -->ATHB12    <---------TOE2(3)      --------->HSFC1(2)      <---------LBD16<-----------GT1 --------- --YAB1<------ZmHOX2a(1)            <---------TOE1(2)        <-----------RAV1(2)     ----------->HVH21 -------------WRI1                 <---------CCA1(2)   <----------DOF2     <-----------GT1<------NtERF2   tggttctaaggagattaagattgacaaaccatgactcgtagcttctcttgttgcactctttattcaggagcctgaattttccgatttttgacgccggaag  23862100                                                          <------NtERF2                                                         --------->HSFB2a(2)                                                        --------->ETT(1)                                                        <---------ANAC46                                                        <---------LBD16                                                      <-----------HVH21                                                     ------>ZmHOX2a(1)                                                 --------->ARR11(3)                                     --------->LBD16 =================================HOX2a_HOX2a                       <---------ANAC58          <---------ARR11(3)  ---------->DOF2      <---------ANAC58        <---------YAB1                  ====================== ------>CCA1(2)  <------ZmHOX2a(2) <---------LBD16 ------>ZmHOX2a(2)--------->CCA1(2)         ------- >LBD16  --------->GLK1(2)--------->ATHB12   --------->YAB1    ---------->DOF2 <------ZmHOX2a(2)   ataagaaagaaattcttggatcatgtcttgatttatcaccggagaactcatgatcctgtcgggaataaagagatgagcacgatcactgaatgagaaatga  23862200       <---------ARR14(2)             ----------->GT1  <----------DOF2   --------->YAB1       --------->ARR14(2)          --------->DAG2  ------>ZmHOX2a(1)----------->GT1      <------ZmHOX2a(1)           ---------->DOF2  <----------DOF2---------->DOF2   --------->YAB1            <---------YAB1    <-----------GT1   <------ZmHOX2a(1)  <----------DOF2 ============HOX2a_HOX2a   --------->YAB1 <-----------TBP      <---------TOE2(3)   <---------DAG2 ---->GT1------>ZmHOX2a(2)<---------YAB1  --------->AHL20(2)   <---------TOE1(3)<-----------GT1   aaaaatcaggatcggtagagaacaacttatgatgaataaagtgtttatatatcctttctttgtttaaggaaagtatcaaaatttgcctttttcttcgcta  23862300                                            <---------TOE2(3)                                         <---------YAB1         --------->ANAC58                                       <---------ICU4           --------->ANAC58                                      --------->ICU4        --------->TOE2(3)                                      <---------YAB1  <---------YAB1                            <----                              <---------ARR11(3)  <---------ANAC58                              -----                              --------->ARR11(3)  <---------ANAC46                    <----------DOF2                           --------->AHL20(2)     <---------ANAC55(1)       <---------ARR11(3)  <----                        ----------->GT1--------->ATHB12     --------->TOE1(3)  <----------DOF2 ------                <-----------GT1  <----------DOF2 --------->MYB52(2)      <----------DOF2       ------ ------>ZmHOX2a(1)   ---------->DOF2--------->YAB1<---------ANAC58       <---------DAG2   <----------   gtcctaaaacaaacaaattaaccaaaagataaaatctttcatgattaatgttacttgtgataccttaagccaaaactttatctttagacttttaaccaaa  23862400                         <------ZmHOX2a(1)                ===============================================================================MADS_MADS            <---------WOX13(1)         <---------AHL20(2)         --------->AHL20(2)                          --------->ATHB12        --------->AHL20(2)                         --------->GLK1(2)   --------->At5g28300 <---------TOE2(3)         --------->MYB46(3)  ----------->GT1  <---------ZAT6              ------>MYB83 -----ARR14(2)  <---------------AGL15        <---------MYB59 ---->ARR14(2) <---------ANAC58              --------->MYB46(3)<---------AHL20(2) -----ARR11(1) <---------ANAC58             --------->ANAC46   <---------YAB1  --------------->AGL15 >MYB83 <---------AHL20(1)                <-----------GT1     <---------AHL20(2)             -------- >MYB46(1) <------------CBF      <---------DAG2------>MYB46(1)--------->AHL20(2)           <--------- -GT1   <---------AHL20(2)       <----------DOF2------------>CBF               <---------------AGL15   tctacagtaatttaattgctagacttaggaaacaacttttttttttacccaacaatctttggattttaattgtttttttttctactaatagattaacaac  23862500          <---------TOE2(3)         --------->YAB1    <-----------GT1         <---------ICU4--------->ATHB12        --------->ICU4 --------->ATHB51       <---------AHL20(2)<---------WOX13(1)     <---------AHL20(2)<---------ICU4       --------->YAB1 ----------->GT1           <---------------    --------->AHL20(2)--------->ICU4       <---------AHL20(2)              --------->ANAC46         < --------->AHL20(2)   <---------YAB1      --------->AHL20(2)    --------->YAB1      <-----------GT1 - ->MYB46(3)        <---------YAB1      <----------DOF2  <---------ZAT2     --------->ANAC58         < --GT1--------->YAB1--------->YAB1 <----------DOF2      --------->ZAT2     --------->ANAC58         -   tcattatataataatgtttctatcataattgacaattctttctttttaataaacatccagcttgtataataatccacaagtcaatttcaccattttggcc  23862600                                                                      <---------ANAC58               <---------ICU4                                         --------->ANAC58              --------->ICU4                                          --------->ANAC55(2)             <---------AHL20(2)                                       --------->ANAC46     <---------AHL20(2)                                               <---------ANAC55(2) <---------AHL20(2)                                            --------->AHL20(2) --------->AHL20(2)                 --------->ATHB12       <---------YAB1   <-----------GT1 --AGL1     --------->YAB1          <---------ICU4  --------->AHL20(2)--------->ANAC58 ---------AHL20(1)                  --------->YAB1  <---------AHL20(2)--------->ANAC55(1) -------->AHL20(2)                 <---------YAB1  --------->AHL20(2) <---------ANAC58 ---------AHL20(2)             <---------GLK1(2) <---------ARR14(2)   <---------ANAC55(1)         <-- -------->AHL20(1)         ---------->DOF2   <---------At4g35610<-----------GT1                <-----   aatttattttcttataaaaattagcacaaaaaagattatcattgtttagcagatttaatttctaattaacttacgtaatttccattttccatagatttat  23862700  Previous    Next  AGI:  At1g64290.1    Description:  F-box protein-related. similar to F-box family protein-related [Arabidopsis thaliana] (TAIR:AT1G64295.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAD10759.1); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 23860841    to: 23862151    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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