Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->AHL20(2)            <---------ZAT18                   <---------AHL20(2)            --------->ZAT18                     <---------YAB1          <-------TEIL      --------->TOE2(3)    <-------TEIL                      <---------ICU4          --------->ZAT18--------->RVE1(1)   <---------------AtSPL8               --------->ICU4 ------>YAB1      <---------AHL20(2)         --------------->AtSPL8           --------->TOE2(3) ------>ATHB12    --------->AHL20(2)         --------------->AtSPL3           <---------------AGL15 ------ATHB1   <---------AHL20(2)          ---------->DOF2  -------->P        --------------->AGL15 -------ICU4   --------->AHL20(2)   ---------->DOF2  <----------DOF2         <-----------------AGL1 ----->ICU4 <----------DOF2 --------->TOE1(3)<---------TOE2(3)               ----------------->AGL1 ------ATHB12 --------->AHL20(2)  <---------ATHB12   <---------DAG2        <-----------GT1   --------   tgattccatatgtgcattaatttaaaaatacctcaaatcaaagaataaaggtacactttatctaccattgaattaagttacctcattatgaaatggaaag  23839500                    --------->ANAC58                    <------ZmHOX2a(2)                    --------->ANAC55(2)                <---------ARR11(3)                    --------->ANAC58                   --------->ARR11(3)                           <                    --------->ANAC46              <---------STY1(2)                               ---              --------->AHL20(2)                  --------->At4g35610                            <---              <---------YAB1                     --------->MYB52(2)                       <---------AHL20(2)       --------->DAG2                          <---------MYB52(1)                         --------->AHL20(2)     ---------->DOF2<---------ANAC55(2)      <---------MYB46(3)              --------->YAB1   <------   --------->YAB1 <-----------GT1        <---------AHL20(2)      <---------DAG2          --------->AHL20(2) -->DOF2      <---------AHL20(2)         --------->ATHB12        <----------DOF2     <---------YAB1 -   cgaaatcaaaaggcatattattacgaaacaataaactgtagatttattggttagctagatcatccaacttttcattcaatctgaattttcatttaattta  23839600                                            --------->MYB46(3)                                     --------->ICU4                                     <---------YAB1                                             <----         ----------->GT1      <---------ANAC46                                                  ----- --------->ATHB12        <---------ICU4     ------------>CBF                                    ----- ---------YAB1           --------->YAB1   <-----------GT1                          --------->ICU4 ------>YAB1            <---------ATHB12  <<<<<<<<<GT-1                <---------ATHB51        <----- ------YAB1       ----------->GT1  <--------HAHB4                      <---------AHL20(2)    -------- ---AHL20(2)   --------->GLK1(2)   --------->YAB1--------->AHL20(2)    --------->AHL20(2)  ---------- -------->ICU4 --------->ARR11(3) <---------YAB1<---------ATHB12 ----------->GT1 ----------->GT1<----   tgatgatttgaatgtaaaatctgtaaatcatggtgtattattattaaccaatgaaatattctaaatactgaaaataattcatgtagtgatttagccaatc  23839700                                                                                       <------------CBF                                                                                    ------------>CBF     <---------------AGL15                                                         --------->AtLEC2 <---------TOE2(3)                                                                 --------->ANAC58 -----ICU4                          <---------ANAC58                      ------------>CBF ---->YAB1                          <---------ANAC46                     --------->ANAC55(2) ---->ATHB12                        <---------ANAC58   ----------->GT1   --------->ANAC58 ----ATHB12        <---------AHL20(2)  <-------TEIL   --------->ANAC58   <---------ANAC55(2) ->WOX13(1)        <-----------GT1<-----------GT1     --------->ANAC58   --------->ANAC46        ---- -->CBF     ----------->GT1    <---------ICU4<---------YAB1              --------->ANAC58       ----- ----HAHB4 <---------AHL20(2) --------->AHL20(2)<---------WOX13(1) <-------TEIL    --------->ANAC58   atttaggctatatttagttatttacatagcaactaattacgttcatgttgattaacaaggaaaaacgcgttcattacgcaataccatgcaattggaatcc  23839800                <---------MYB59                --------->TOE2(3)                                              --------->ARR11(3)        --------->ANAC58                                                       <---------ARR11(3)        --------->ANAC58      <---------TOE1(2)               <---------ARR11(3)        --------->ANAC46<---------GLK1(2)                     <---------AHL20(1)    ---------->DOF2 -->ZmHOX2a(1)  --------->TOE1(3)                             --------->AHL20(1) >>>>>>>>>RAP2.2 ---->TOE2(3)  <---------ANAC55(2)               ---------->DOF2              <---------CCA1(2)  ----   ttcattatccaagaaatacctaaacaaattctcatgttttgcacagaaaacaaaaggaatccaaaatatttgctataggtatatctaaaagaaacaacta  23839900                                                                                                    <                                                                                                    -                                                                                       <-----------RAV1(2)                                         <-----------TGA1                              --------->ATERF1(1)                                        --------->YAB1                                --------->ABI4(2)                                       <-------TEIL                                   <---------ZAT14                               <---------ICU4                <---------At5g28300      --------->ZAT14                             <---------ANAC46               <-----------GT1          --------->ALFIN1       <---------AtLEC2      <---------ANAC58            <---------ICU4         --------->MYB52(1)  -      <-------TEIL           <---------ANAC58            --------->ATHB12 ---------->DOF2           -     --------->AtLEC2   <---------MYB46(3)               <--------HAHB4 --------->MYB46(3)          <  <-------TEIL          <-----------RAV1(1)             --------->ICU4----------->RAV1(1)    <------NtERF2 ------->TBP     <-----------HVH21<-----------GT1       <---------YAB1=============================RAV   tatatacatgcatgaagaccgtcggattgttgcttattacattcgtcattctcttggcatcattaccgcttccaacaaaagctatcggtgcaggcggaag  23840000                                                                                --------->ETT(2) --------->CCA1(2)                              <---------ANAC58                <---------ETT(2) <------ZmHOX2a(2)                              <---------ANAC58             --------->CCA1(2) ---------ARR11(3)              --------->TOE1(2)                            --------->GLK1(1) -------->ARR14(2)           ---------->DOF2    <---------ANAC46            <---------ARR11(3) -------->ARR11(3)    <---------ANAC55(2)       <---------AtLEC2            --------->ARR11(3) -------->AGP1      --------->YAB1   <---------ARR14(2)                  <---------TOE2(3) ---------ARR14(2)--------->GLK1(2) <------ZmHOX2a(1)    ----------->GT1---------->DOF2    ----------   tagatccaagagggacagagaatcatgtgaagaaagtaggattcagacttgcttggacgttgttaatagtggattaaagatatcgaccgaatgttgtaaa  23840100                             <---------REM1(1)                             --------->bZIP60(1)                             <---------bZIP60(1)              -------->P     ----------->GT1             ------->GAMYB   --------->TGA2(1)                          --------->TGA1a            <---------MYB55(2)                                          --------->O2            <---------MYB52(2)                                     <---------At4g35610            --------->MYB46(3)                   ======================HOX2a_HOX2a            <---------MYB111(1)    <---------------AGL15        ------>ZmHOX2a(1)                  <-            <---------MYB111(2) ------->TEIL     <------ZmHOX2a(2) <---------ZAT2                  --   ---------->DOF2    <----------DOF2           <---------ARR11(3) --------->ZAT2                  -- ->GT1    ----------->RAV1(1)<---------TGA2(1)  --------->ARR11(3) --------->At4g35610       --------   tttttgaaagagcaacaaccatgtctttgtgatgtaactaaaaccagtaagatcaagaccaatgtcctcagctctcgtctcaagtcttgtggtattcata  23840200                                                                        --------->ARR14(1)                                                                        --------->CCA1(2)                                                                       --------->ARR11(1)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                            --------->LBD16        ---------->DOF2                                          --------->ANAC46       --------->ANAC58                                         ------->GAMYB           --------->ANAC58                                        --------->MYB46(3)     --------->ANAC46                                        <---------ALFIN1     --------->AtMYB61                                       -------->P            <---------ALFIN1                                   --------->ANAC58         --------->ANAC58 --------MYB59                     --------->ANAC46         --------->ANAC46 ------->TOE1(3)                   --------->ANAC58         --------->ANAC58       <----------DOF2 ------->TOE2(3)                 ---------->DOF2      --------->HSFB2a(2)   <---------MYB52(1) ->YAB1 ----------->GT1<---------------------WRI1     <---------HSFB2a(2)<-------TEIL      <---------   acctaaaatgtggaaataacaacaatgcgatgcgaacaagcaaccccccagtacttcgagacaccacaccaaagatacgttgagtctttgactctttttt  23840300                                                                               <--------ATHB1                         <---------------AGL15                                 <---------ICU4                       <-----------------AG                                    --------->YAB1           --------->YAB1--------------->AGL15  <----------DOF2                --------->ATHB12          <---------YAB1----------------->AGL1 --------->AtMYB61         --------->GLK1(2)         --      ----------------->AGL2                <---------ALFIN1    <---------ANAC58              -------      ----------------->AGL3             <-----------GT1        <---------ANAC46          <---------AHL20(2)     --------->ZAT6    <-----------------AGL1  <---------DAG2   <---------ANAC58         --------->AHL20(2)   <-----------GT1    <-----------GT1  <-----------GT1      <---------ANAC58  --------->ICU4 <------- -DOF2===================================MADS_MADS          <---------ANAC58  <---------ATHB12<------   tatattaaccctattatagatagtttacaatttagggaaattttctccacctttcccatattccttgcttgtaagaatcaatgatttcatattaaatcat  23840400  Previous    Next  AGI:  At1g64235.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT3G57310.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 23839912    to: 23840283    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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