Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <----------ID1                                                        --------->YAB1                                                        --------->TOE1(3)                                                        --------->TOE2(3)       <---------ATHB12          <------MYB83          <---------YAB1  --------->MYB52(1) -------YAB1                     <------MYB46(1)      <---------ARR11(3) ----ARR14(2)                   --------->MYB46(2)    --------->ARR11(3)                       ------ --->ARR14(2)    <---------DAG2<--------P<---------ATHB12  --------->AHL20(2)        --------->At4g35610 ---CCA1(2)      <----------DOF2--------->MYB59  <---------ARR11(3) --------->ANAC46 <---------At4g35610   atgatacaaatgaagaagactttttgttttttggtaggcacaaatgaagaagacattatcttaaaataccacaaaacagaacatttcagctcttggtgat  23834300                       ---------->DOF2         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        ------------------------>ANAC81       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      ------------------------>ANAC81      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                      --------     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                     --------    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <---------YAB1                       <-------    xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             <-------GAMYB                             <-------   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            --------->MYB52(2)               <---------At5g28300   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             <---------MYB46(3)              <-----------GT1  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <----------DOF2            --------->ANAC58 --------->ZAT18  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------At4g35610            --------->ANAC58 <---------ZAT18 ------------------>ANAC81            --------->At4g35610<---------ICU4  --------->At4g35610 <-------   caaaaaaaaaaaaaaaaaaaaaaaaaaaagagaacatttcagctctttttgtttgttgataattgtatgccaagcctctgaattttaccgcgcttacgtt  23834400                                                                               --------->YAB1                                                                              <------ZmHOX2a(2)                                                                            ------->GAMYB                                                                           --------->MYB46(3)                                                                         ------>MYB46(1)                                                                       <---------MYB55(2)                                                                       --------->MYB46(3)                                    <------MYB83                      --------->ANAC46        <------ZmHOX2a(1)           <------MYB46(1)           --------->AHL20(2)   <----------DOF2                 --------->MYB46(2)         <---------AHL20(2) ->ANAC55(2)                       --------->MYB59        --------->ICU4--------->MYB55(1) ->ANAC46                         <---------MYB55(1)     --------->ANAC58--------->MYB52(1) --ANAC55(2)                     <---------MYB52(1)  --------->ANAC58 --------->ANAC58 --ANAC58     ----------->GT1   <---------RAP2.6(3)  --------->ANAC58 --------->ANAC58             -- --ANAC58     <---------ZAT6<-----------GT1------->TEIL  --------->ANAC58------>MYB83       ---------   acaggctttaggaatagagttaagagaaattagccgtttggtatgaattttcttgaagcaagaattaaatacacccaacgatcaaaactcagagaaacgg  23834500                                                                                      <---------ARR11(1)                                                                                      <-----------ARR10                                                                                      --------->GLK1(2)                                                                                      <---------ARR14(2)                                                                                   <---------ANAC58                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                  <------------------                                                                                 ------>NtERF2                                                                                <---------ATERF1(2)                                                                                --------->ATERF1(2)                                                                                --------->DEAR3(1)                                                                               --------->RAP2.6(3)                                                                              ------>MYB83                                                                              --------->MYB52(1)                                                                    <------NtERF2--------->LBD16                                                                   ------>NtERF2<---------RAP2.3(3)                                                                   --------->LBD16<------NtERF2                                                                  --------->ATERF1(2) ------->TEIL                                                                  <---------ATERF1(2) --------->ARR14(2)                                                                  <---------RAP2.6(2)<---------ARR14(1)                                                                 --------->RAP2.6(3) <---------CCA1(2)                    <---------TOE1(2)   <---------At4g35610      <---------LBD16<---------DEAR3(1) ---------->CBF     <---------TOE2(2)   <---------ZAT2    <----------DOF2  ----------->RAV1(2)   <--- >MYB52(1)          <---------TOE2(3)   --------->At4g35610    <-----------GT1------>MYB46(1)   <----   tctcaatggttttaatggctccaaggtttttttagttttctcagcttatataagagaagacttttttgccggctaaaacctgccggcgtatctttctaat  23834600                                                                                                  <--                                                                                                  ---                                                                                                  ---       <<<<<<<<<GATA-1                                                                            <--      <-----------GT1         <---------GLK1(2)                                                   <--  <----------DOF2    --------->YAB1      ---------->DOF2             <----------ID1               <-- ---WRI1         <---------AHL20(2)   --------->At4g35610      <---------ZAT6                    <--- --------GT1 <---------AHL20(2)       <---------At4g35610    <---------At5g28300             -------- -----ATHB12 --------->AHL20(2)    <---------At4g35610      <-----------GT1              ------------   cactcttttatctatttttttaatcagaaacaaattcttctgctaaagaaaatttctctgttttacagttagagacaaaaactagtttcttcacaatgca  23834700 ---------ARR10 ------>ARR14(2) ------>ARR11(3) -------ARR11(3) -------ARR14(2)                              ------>ZmHOX2a(1)            <----------DOF2 -------ARR11(1)                         <---------GLK1(1)            ---------->DOF2 ------CCA1(2)        <---------GLK1(2)  --------->GLK1(1)          --------->ANAC58 ->AtLEC2         <----------DOF2     <---------YAB1                --------->ANAC58   <---------ANAC58 >CBF      <<<<<<<<<TBF1      <---------MYB52(1)               <----------ID1          <---------ANAC58   aatcttcttgttcttcttctctttgattctctgttttgttctgatttcctctcagactcttgaagacgacaagaaagctttgcttcatttcttgtctagt  23834800                                                                    --------->ANAC58                                                               --------->ANAC46                                              --------->At4g35610   --------->ANAC58                                         <---------YAB1      --------->At4g35610                                        <-----------HVH21    <---------ANAC58                                     <---------MYB52(1)      ----------->RAV1(2)                            --------->ZAT2    --------->ZAT2 <---------ANAC58            --------->ARR14(2)                            <---------At4g35610          <-----------HVH21      <------ZmHOX2a(2)                            <---------ZAT2    <---------ZAT2 <---------ANAC46 --------->GLK1(1)    <-                            --------->At4g35610         --------->ALFIN1--------->MYB52(1)    <------               --------->ATHB12<-----------RAV1(2)<---------WRKY18(1)------->GAMYB       <---------ARR14(2)   ttcaattcttctcgtctccattggaaccagagctcagacgtttgtcatagctggaccggtgttacctgcaacgaaaacggagatcgaattgtatccgtta  23834900           <------MYB46(1)           <------MYB83         <--------P        <-------GAMYB       <---------MYB46(3)  ----------->RAV1(2)                                                                              <-  <---------ANAC46                                                                                 --  <---------ANAC58                                                                           <-------  <---------ANAC58                <----------DOF2                                        <-----------HVH21 --------WOX13(1)              ------>ZmHOX2a(1) <---------CCA1(2)             ---------->DOF2 ------ ---MYB52(1)     --------->MYB52(1)      <-----------HVH21                --------->TOE2(3)<---------   gattgcctgcggttggattcaacggtttgattcctcctttcaccatcagtcgtctctcttctctcaagtttctaagccttagaaagaaccatttcaccgg  23835000                                                                      <-------TEIL                                                  ----------->RAV1(1) <---------ZAT18                                       <---------CCA1(2)  ------->GAMYB --------HSFC1(2)                <---------WRKY18(1)     --------->MYB46(3)    <---------STY1(2) ------->HSFC1(2)             <---------ANAC58   --------->REM1(1)    --------->ZAT18   <---------HSFB2a(2) --LBD16                    --------->ARR11(3)  -------->P<---------ALFIN1     --------->STY1(2)    < --->LBD16     <-----------GT1<---------ANAC58  ------>MYB83      <---------TOE1(2)     <---------LBD16 --GT1   <---------YAB1     <---------ARR11(3)  ------>MYB46(1)<-----------HVH21        --------->HSFB2a(2)   agacttcccttctgatttcacaaatctcaagagcttgactcatctctacctacaacataaccacctctcaggtccactactagctatcttctcggagttg  23835100                                                   ------>MYB46(1)                                                   -------->P                                                   ------>MYB83                                                  <---------ALFIN1                                           --------->HSFB2a(1)                <---------AGP1             <---------HSFC1(2)                <---------ARR11(3)         --------->HSFC1(2)           <-------TEIL                    <---------HSFB2a(1)          --------->ARR11(3)              --------->ANAC58       <---------TOE1(3)                  --------->ANAC58                                      -----       <---------TOE2(3)               ------->GAMYB              <---------WOX13(1)            -----   --------->YAB1                     --------->ANAC46          <------ZmHOX2a(1)           --------- --------->GLK1(2)------>ZmHOX2a(2)  <---------LBD16--------->MYB46(3)                  ------->TEIL ---------GLK1(2)<---------At4g35610--------->MYB52(1)    <----------DOF2              <---------CCA1(2)   aagaatcttaaggttcttgatctgtctaacaatggattcaacggaagcatcccaacctctctttcaggattgactagccttcaagtcttgaatcttgcaa  23835200  Previous    Next  AGI:  At1g64210.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G23740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65842.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 23834696    to: 23836526    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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