Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->O2                                                               <---------O2                                                   =======================HOX2a_HOX2a                                             ----------->RAV1(2)                                           <---------ALFIN1   ------>NtERF2                                         --------->SPL7   --------->ANAC58                     <<<<<<<<<WRKY18   --------->At5g28300--------->ANAC58                     <---------WRKY12 --------->TOE2(3)   --------->ANAC46         <----------DOF2   <---------O2    <-----------HVH21  ----------->GT1    --------->ZAT18        --------->ZAT6   <---------TGA1a --------->TOE2(3)  --------->TOE1(3)  <---------ZAT18   <------ZmHOX2a(1) ---ATHB12       <-------TEIL       ------->TEIL   ===============================HOX2a_HOX2a ------AGL15   <---------ARR14(2)--------->ANAC46  ------>ZmHOX2a(2)     <---------TOE2(3) ------>AGL1   <---------GLK1(2) --------->ANAC58<---------ARR11(3)    ---------->DOF2            --- -------AGL1   --------->ARR14(2)--------->ANAC58--------->ARR11(3)<------ZmHOX2a(1)         <-------   aggagacgagagagcccgattcgtcaatggaatacacgaaccgtaacacctgatcttggtgcgccacgaggagtaaaggataacactttgaagactaaac  23827800                                                                                              <------                                                                                              -------                                                                                             <------NtERF2                                                                                           <---------ANAC46                                                                                    --------->ICU4                                   --------->MYB59                               <-----------------AGL3                                 <--------P                                      ----------------->AGL3                             --------->O2                                        <-----------------AGL2 ------>MYB52(1)            <---------LBD16            --------->GLK1(2)     ---------->DOF2--------- --ZAT14                --------->ANAC46     <---------TOE2(3)           --------->YAB1   <---------LBD16   taagcgaagcgagaacaacgagttcaaggccacgggttaggctattcaaggattgagtttctgatgtaatctgtatcgtaagagccatttttggcggaaa  23827900                                                                                         <---------ARR11(3)                                                                                         --------->ARR11(3)                              --------->KAN4(2)     <---------At4g35610                  --------->ARR14(2)                             <---------KAN4(1)      --------->At4g35610                  <---------ARR14(2) --------->ETT(1)            --------->KAN4(1)   <-------TEIL                           <---------CCA1(2) ---ARR14(2)         --------->ZAT2        --------->ARR14(2)                           <---------GLK1(1) -->ARR14(2)         --------->At4g35610   <---------ARR14(2)                <---------ZAT6       <-- >LBD16              <---------ZAT2     <---------ANAC46            ----------->GT1    ------->TEIL   tggtcggactcgaagatggaacaagctgagattgttccatttgtgtatatgttcatctgtagagcttatattgtaactagtgtataatgtatatctgttt  23828000                                                                                                  ---                                                                   <---------ARR14(2)            ----                                                              ----------->GT1                    <---                                                       ---------->DOF2----------->GT1        --------             --------->At4g35610                  ----------->GT1  --------->GLK1(2)    ---------->DOF2   --------->ATHB12                               --------->ANAC58 ------->TEIL      <---------------AGL15 -------AHL20(2)                                  --------->ANAC58 --------->ARR14(2)--------------->AGL15   tatattgatttgatcatctgtgaattttgtattcttgatttttgtttcagacaagaaaaaagagttgtgaatctgtgaattggtagactataaagagcag  23828100     <------NtERF2               <---------PCF2    ------>NtERF2             <-----------RAV1(1)                                                  <-   ----------->HVH21          <---------HSFB2a(2)                                                 <--   <---------DEAR3(1)         --------->HSFB2a(2)                                                ----   --------->DEAR3(1) <------------CBF                                                          <---- ------>MYB52(1)     --------->ATHB12                                     --------->ZAT14       ----- ----->ARR14(2)     <---------YAB1                                        <---------ZAT14       <---- ------ARR14(2)     <---------AHL20(2)                     <---------MYB52(1)*TSS             ------- ->At4g35610       <-----------TBP------>NtERF2        <---------DOF5.7(2)--------->REM1(2)--------->MYB52(1)   aaacggcgacgttttgagggtttttattggttctggggcctatttgtattatcaagttatcgtttgtcttcgtctgtgaagagagcgagatggcaacggc  23828200                   --------->ARR14(2)                   <---------ARR14(2)          --------->ARR14(2)          <---------AGP1          ----------------->AGL1          <---------ARR14(2)      ----------------->AG          --------->ARR11(3)      ----------------->AGL2         <---------CCA1(2)     <---------SPL7     <---------ANAC46         --------->ANAC55(2)    <---------TOE2(3)         <---------ANAC58                                            <---------DAG2    <---------AtMYB61 <---------ALFIN1   <---------RAP2.3(2)                  <---------WRKY12      < --------ANAC46   --------->ZAT2  ----------------->AGL3                     <---------MYB52(1)     - ----NtERF2       <---------ZAT2 ------->TEIL                               <-----------HVH21   <---- -->NtERF2<---------ARR11(3)  <---------ANAC55(2)                           --------->LBD16   <------ -----DEAR3(1)    --------->At4g35610 --------->DAG2          <---------ARR11(3)       <-----------GT1 ---->DEAR3(1)    <---------At4g35610---------->DOF2          --------->ARR11(3)      <---------MYB52(1) -----ANAC46------>ZmHOX2a(2) <---------ANAC58            ---------->DOF2  --------->ANAC46   <------ >GAMYB--------->ALFIN1      --------------->AtSPL3    --------->YAB1<---------GLK1(1)--------->DOF5.7(2)   gtcgtttaggtggatcttgcagctccacagagacgtaccaaaagcggctcgattctatgagaaaggtctcgatttctccgtcaatgtcgttaccttacgt  23828300                          --------->STY1(2)     --------->LBD16                          <---------STY1(2)     <---------TOE2(2)                <-----------HVH21               <---------TOE1(2)               <---------At4g35610             <-----------RAV1(2)               --------->At4g35610        <---------At4g35610        --------->ZAT14  --------->ANAC58 --------->At4g35610                                   ----- ---------At4g35610      --------->ANAC58 --------->ZAT2                                      ------- -------->At4g35610  --------->ANAC46     <---------ZAT2                                     <------- -----MYB52(1)--------->MYB59            --------->ANAC58                               --------->TOE2(3) ---ANAC58  <---------MYB52(1)           --------->ANAC58                        --------->ATHB12 ---ANAC58 <-----------HVH21   <---------ARR11(3)                               <------ZmHOX2a(2)  <-   tgggctgaacttcagtcaggtcccctcaagctagctcttatgcaagctcccaggtattgactcaatgcctataacctgttcgatcatttgcctcaatgaa  23828400                                                          --------->ATHB12                                            --------->ZAT14                                            <---------ZAT14                                          <---------At4g35610                                <-------           --------->LBD16      <---------ANAC58         <---------YAB1             <-----------ARR10     <-----------GT1            <-------GAMYB        ------>ZmHOX2a(1)              --------->ARR14(2) -->TEIL  <---------LBD16       <---------ANAC58 <-----------HVH21                  <---------ARR14(2) -->YAB1 ----------->RAV1(2)<---------ANAC58--------->ZAT18                         --------->GLK1(2) --ATHB12<---------LBD16    <---------ANAC58<---------ZAT18 <---------WOX13(1)     <---------GLK1(2) ---------DOF2            <-----------GT1 --------->At4g35610        --------->ALFIN1        --------   actttattttcccctggagagttgttttttacttggttgtcttcagttcactgtcctgtctgattgaaaatgtggaacttatagagaatctgtgttaaat  23828500        --------->ATHB12        <---------ICU4        --------->YAB1                                                    <---------ZAT14        -------->ATHB1              --------->ICU4                        --------->ZAT14       --------->ICU4               <---------YAB1            <---------YAB1 <---------At4g35610       <---------ATHB12         ------->MYC3     <---------ARR14(2)  --------->ZAT14       <---------YAB1           <-------MYC3     --------->ARR14(2)  <---------ZAT14 --AHL20(2)             <---------At4g35610     <------ZmHOX2a(1)   --------->DOF5.7(2) ->AHL20(2)         <---------REM1(1)       ---------->DOF2<---------MYB52(1)--------->At4g35610   tatagagccatcattgtttttgatgcagcgagcatgtgatgagtgagaaaggatactcttcgttactatcgttcactgtagcagacattaatacaacaat  23828600                                                                          <---------ALFIN1                                                                         --------->MYB46(3)                                                                        -------->P                   --------->At4g35610                              --------->ANAC46                   --------->ZAT2                                   --------->ANAC58                   <---------At4g35610                      ----------->GT1                 <------ZmHOX2a(1)                         --------->ANAC58      --------->AtLEC2<---             --------->ICU4                                --------->ANAC58      ------>ZmHOX2a(1)        --------->HSFB2a(2)                        <-------TEIL     --------->ANAC58      <----------DOF2   ctctaaacttatggaattaggagctgaactcgatggctctatcaaatatgaagtccatggcaaggtaaaaacgcaaccacttcctgcaaatgctttaatc  23828700  Previous    Next  AGI:  At1g64180.1    Description:  intracellular protein transport protein USO1-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65868.1) Range:  from: 23825179    to: 23828022    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g64185.1    Description:  lactoylglutathione lyase family protein / glyoxalase I family protein. similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT5G41650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65867.1); similar to unknown [Populus trichocarpa] (GB:ABK93252.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360) Range:  from: 23828177    to: 23829046    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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