Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <------MYB83                                               <---------------AGL15                              --------->AHL20(2)                  ----------->GT1                  --------->GLK1(2)      --------->GLK1(2)<---------AtMYB61                  <-----------ARR10      <---------ARR11(3)<------MYB83                            --  ------>ZmHOX2a(1)     --------->At4g35610  -------->P--------->ATHB12                            -- --->GLK1(1)     <---------GLK1(2)       --------->ARR11(3)<------MYB46(1)    --------->YAB1       -- ----GLK1(1)--------->MYB52(1)<---------AHL20(2) ---------->DOF2  <------MYB46(1)           ---------   tctcctctaggccttaacagaatctcatctaaaaaaattcaaaaatctaccaaaagaagattggtggaaggtaacaaaaatcagaatcacctcgaggtaa  23815900                                     --------->ZAT2                                     <---------At4g35610                    <---------HSFC1(2)                    --------->HSFC1(2)                    <---------HSFB2a(1)             --------------------->WRI1             <-------GAMYB        <---------At4g35610                                   ---------->DOF2            <---------ANAC58      --------->ZAT2                                   ----------->GT1            <---------ANAC58      <---------ZAT2                                <---------GLK1(2)  --------->RAP2.6(2)            ------>MYB83         --------->ANAC46       --------->ANAC46 ------->ANAC58     --------->HSFB2a(1)      <-------TEIL                 --------->ZAT18 ------->ANAC58    --------->ANAC58  --------->At4g35610                  <---------ZAT14    -------- ------->ANAC46    --------->ANAC58  <---------ZAT2   --------->ANAC58    --------->ZAT14    -------- -->GT1     <---------ANAC46     ------>MYB46(1)      --------->ANAC58 --------->At4g35610   <-------   caagccgcatcgtttcgttggaagcatcgaaaacctagctgctgagattcatttcgacgcaattgagtcaaacatctgcacagaattgtgaaaagacgta  23816000                                                         --------->YAB1                                                        --------->ICU4                                                        <---------ATHB12                                                      --------->WOX13(1)          --------->ATHB12   ------>ZmHOX2a(1)                                 --------->AHL20(2)           <---------ICU4 ->ANAC58                                         --------->WOX13(1)      ---------->DOF2 ->ANAC58                                  --------->At4g35610    <-----------GT1--------->ICU4------ --ANAC55(2)                         ---------->DOF2<---------ATHB12 --------------->AGL15------->TEIL   aactcctacatggctacattccattcgcatagcaaattcaaaagccgatgaacaatcaattatcaaatttacctagaaaagtattgattacgaaccgaaa  23816100                                 --------->HSFB2a(2)                                 <---------HSFB2a(2)                            --------->GLK1(1)                            <---------At4g35610                            <---------GLK1(1)                           ------->TEIL                           <-----------ARR10                 --------->At4g35610    ====================================HOX2a_HOX2a                                            ------    ------>ZmHOX2a(2)   --------->ANAC58                                                       <-----   <------ZmHOX2a(2)    --------->ANAC58         ------------------------>ANAC81            <--------   =====================================HOX2a_HOX2a   >>>>>>>>>TBF1                    <---------STY1(1)  --------->ARR14(2) <---------ARR14(2)         <------ZmHOX2a(1)          --------->ARR14(2)  ------  <---------ARR14(2) --------->ARR14(2)     <------ZmHOX2a(1)              <---------ARR14(2) <------ ---->DOF2       <---------LBD16 ------>ZmHOX2a(1)    <XXXXXXXXXXXXXXXXXXXXMIR838      --------->STY1(1)   acccgatcggaattggataagcggagacgcatctcctcgacgatgaggaaggagaagaagaagtagaagaaaaatcggatttgggaggcctagggttctg  23816200                                                    --------->ARR11(3)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                   <------ZmHOX2a(1)                                               ------>ZmHOX2a(1) --->HSFB2a(2)                                 --------->LBD16 ----HSFB2a(2)                               ----------->RAV1(2)               <---------REM1(2) -ARR14(2)                                <----------DOF2                   <<<<<<<<<TBF1 --->HSFC1(1)             <-------TEIL   <---------ANAC58                <<<<<<<<<TBF1 ---LBD16          --------->LBD16       <---------ANAC58             <<<<<<<<<TBF1             <----   gaatggaatgcgaagcgactccgagagattcaaacttagcatttctttcctgaggattttgtatttcgcttcttcttcttcttcacagtgtgattcttct  23816300                                                                                                    -                                                                                                   <-                                                                                                  <--                                           ----------->GT1--------->ANAC46                        ---                                         --------->ARR11(3)                                     -----     --------->ANAC58                    <---------ARR11(3)                                  ========     --------->ANAC58                   *TSS <---------ZAT6                <---------LBD16   -------- ------DOF2               <-----------RAV1(1)----------->GT1       <---------ZAT6     --------->ANAC46   ttactgcgagcaaaaaacctttggctctgtgttgttctgagaagatagtgaaaaaaatccacaaaactagagttattcgcgcgcgtccacgtagtaacag  23816400      ----------->GT1     --------->ALFIN1   --------->ALFIN1  ------->MYC2  ------->PIF4  <-------PIF4                          <---------bZIP60(2)  <-------MYC2                          <---------ANAC46  <-------MYC3                       ----------->HVH21  <-------PIF5                       ----------->TGA1  ------->MYC3                      <-------MYC3  <-------MYC4                      <-------MYC2  ------->MYC4                      ------->MYC3  ------->PIF5                      ------->MYC2 --------->O2                      --------->ANAC55(2) --------->TGA1a                   <---------TGA1a <---------O2                      --------->ANAC58 <---------TGA1a                   --------->TGA1a ----------->OsbHLH66              <---------ANAC55(2) -----------OsbHLH66               --------->ANAC46 -------ZAT18                      --------->bZIP60(2) ------>ZAT14     --------->ANAC58 --------->ANAC58                                      --------->TOE1(3) ---->At4g35610   --------->ANAC46 --------->O2<---------ANAC58                          --------->TOE2(3) ==========bZIP_DOF                <---------O2<---------ANAC58        ----------->RAV1(1)  --------- -->DOF2          --------->ANAC58 --------->ANAC55(1)      --------->YAB1              ----------->GT1   cgcacgtgtgggaaaaactcaagcaactgttgaatacacgtgacgagtttcgagcctatatatcatattgggccaacaataggcccgttttcgttaaaat  23816500                                                                 <---------ICU4                                                              --------->YAB1                                                      <---------MYB52(1)                     <------ZmHOX2a(1)             <---------TOE1(2)     <---------MYB52(1)                    <----------ID1          <----------DOF2  <---------YAB1       <---------ARR14(2)                <-----------GT1--------->MYB52(2)                       <--- >AHL20(2)    <----------DOF2           <<<<<<<<<<GT-3b <---------MYB46(3)                     ------   gccttcgcagataaggctttttaggacaaactattttagtatttttcttttccttcgtttgttatcatcttcacagtttgtcaacattcaacaatttgtc  23816600                                          <---------YAB1                                         <---------AHL20(2)                                         <---------AHL20(1)      <-----------HVH21                                       <---------AHL20(2)       --------->TGA2(1)                                    <---------ARR11(3)          <---------TGA2(1)                                  --------->ANAC46              --------->bZIP60(1)                                <-----------GT1 <---------AHL20(2)                                ---       <---------YAB1   <----------DOF2<---------YAB1           <---------bZIP60(1)             <---- -------DOF2       <---------DAG2 --------->ANAC58             --------->MYB59           --------->ATHB12 ---->ID1          <----------DOF2--------->ANAC58  ----------->GT1           --------->GLK1(2) <----   tttttgtttactattgttctgcttttcttttgtttcacgatattattttttaaaatgtgaatagttatgtcacatttgaaattctgcaacttgatttgct  23816700      <---------At4g35610                                                 ----------->GT1      --------->At4g35610                                         --------->YAB1      ------>NtERF2                                       <---------AHL20(2)    <---------RAP2.6(2)                      --------->TOE2(3)   <---------YAB1   <---------ANAC58                         --------->At4g35610 <---------TOE2(3)   --------->At4g35610              ---------->DOF2       --------->AHL20(2)    <----------DOF2   <---------ANAC58              <------NtERF2            --------->AHL20(1)<---------MYB52(1) ------>ATHB12                  <---------ORA47(2)       --------->AHL20(2)--------->At5g28300 -----DAG2                     <---------DEAR3(1)  <---------AHL20(2)  ------------>MYB.PH3(1) ------DOF2                    <---------DREB2C(2) --------->AHL20(2)  --------->MYB52(1)        <---   ttattggctgccgaatgccaatgttctattaagtcggcgaaagcttagcttaattaaaaaaaaattgatgataaaacggttacttttacaaatggactag  23816800  Previous    Next  AGI:  At1g64150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65879.1); contains InterPro domain Protein of unknown function UPF0016; (InterPro:IPR001727) Range:  from: 23812572    to: 23816340    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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