Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ZAT14                                ------>MYB83                                ------>MYB46(1)                              --------->DEAR3(2)               --------->YAB1 --------->AtMYB61                     --------->HSFB2a(2)          <---            --------->GLK1(1) <---------MYB59    <---------ATHB12   <---------HSFB2a(2)          ---- ---------->DOF2      ---------->DOF2  --------->ZAT14          <----------DOF2----------->RAV1(1)<--   aataaaagagagagaaatcaaaacaaaagagaccaaaccagagtacttcaaatcaaaaacttgagtctttctagattaaaccgacacaaaatttcagaaa  23810400                      --------->ANAC58             --------->ANAC58                      <-----------GT1             --------->ANAC58     --------->MYB52(1) ------AHL20(2)       --------->ANAC58    -------->ATHB1                                      ------- ----->AHL20(2)     ---------->DOF2      --------->ICU4--------->ANAC46        <---------AHL20(2)---- -------AHL20(2)---------->DOF2--------->YAB1 <---------AHL20(2) ------>ZmHOX2a(2)      --------->HSFB2a(2)   taaatgaaacagaacaaggaaagaaagcaacgagaataacagaattattcaatttcccagacatcgatctcagagacatattttttttgtctcgaattaa  23810500                                                   ------->GAMYB                                                   ------------------------>ANAC81                                                 <---------At4g35610                                                 --------->At4g35610                                             ------------------------>ANAC81       --------->TOE2(3)  ----------->GT1                      --------->ANAC58                         <-----------GT1  <--- -->AHL20(2)                           --------->AtLEC2                      ------->TEIL     ------- ------>DOF2                           --------->ANAC58            <----------ID1  --------->TOE1(3)   aaagaagtcaaatttctctgaatttctcatcaaaaacaaacatgcaaattcaactgaagaaaaacaaaaacgaagaatgaatttacctcaattttgaatc  23810600                     --------->ATHB12                   <------NtERF2              --------->ANAC58              --------->ANAC46              --------->ANAC58             <---------LBD16             <---------At5g28300       <---------ARR11(3)       --------->ARR11(3)   <---------ANAC55(2)   --------->ANAC55(2) <---------WOX13(1)  --------->GLK1(2) ------YAB1 <-----------GT1 --------->AHL20(2) >TEIL <---------GLK1(2) --------->YAB1   <---------GLK1(2)   tgattacgagattttcacggcatcgattgataaaatcaaatcgcgattctcaatctctctctctctctatcaataagcgaaattgagtacttggggctct  23810700                                            <------NtERF2                                           ------>NtERF2                                           --------->LBD16                                          --------->RAP2.3(3)                                          --------->ATERF1(2)                                          <---------ATERF1(2)                                          --------->DEAR3(1)                                         --------->ERF1                                         <---------LBD16                                         --------->DEAR4(2)                                         --------->ATERF1(1)                                         --------->ORA47(2)                                         <------NtERF2                                         --------->RAP2.3(1)                                        <---------ATERF1(1)                                        <---------RAP2.3(1)                                        ------>NtERF2                                       --------->DEAR3(1)                                      <---------At4g35610                                      --------->ATERF1(1)                <---------WOX13(1)    --------->At4g35610              --------->ATHB12  --------->GLK1(1)     ===============================HOX2a_HOX2a             <---------YAB1    <---------ARR14(2)     ==========================HOX2a_HOX2a         <---------ANAC58      --------->ARR14(2)     <------ZmHOX2a(2)         <---------ANAC46 <---------STY1(1)<---------ATERF1(1)         <---------ANAC58--------->TOE1(2)<---------DEAR3(1)             <------ZmHOX2a(1) <---------       <---------ANAC46  --------->TOE2(2)--------->RAP2.3(2) ----------->GT1 <------ZmHOX2a(1)   acaaatgttttgggtgtgattgaaaaacctagggatttgcagcgccggcgagagagatcgagagaggtataaataggagaggagagagagaggctttttt  23810800                                                                                         <---------bZIP60(1)                                                                                     <-------PIF5                                                                                     ------->MYC2                                                                                     ------->PIF5                                                                                     <-------PIF4                                                                                     ------->PIF4                                                                                     <-------MYC4                                                                                     <-------MYC3                                                                                     ------->MYC3                                                                                     ------->MYC4                                                                                     <-------MYC2                                                                                    <---------TGA1a                                                                                    --------->O2<----                                                                                    --------->ANAC46                                                                                    <---------O2-----                                                                                    <---------ANAC55(2)                        --------->ARR14(2)                                          --------->TGA1a                        <---------ARR14(2)                                          --------->ANAC55(2)                        ------->TEIL                                                =================                        --------->GLK1(2)     <------ZmHOX2a(1)                    ------------>OsbHLH66                 --------->ARR11(3)           ----------->GT1                     <------------OsbHLH66                --------->YAB1         --------->ALFIN1   --------->MYB52(1)      <---------ALFIN1         --------->ALFIN1    ---------->DOF2 ----------->GT1               <---------ANAC58    <----- -DOF2 <---------ANAC46<---------ARR14(1)  <------ZmHOX2a(1)               <---------ANAC58 ---------   ttttgaagggagtggaaatgatatcgaatctgaaaggagaggtgaggaggataaaaaaaccaagggtaagacgactggtttgccacacgtgccatcagaa  23810900       <-------MYC3       ------->PIF5       ------->PIF4       <-------PIF5       ------->MYC4       <-------PIF4       <-------MYC2       ------->MYC2       ------->MYC3       <-------MYC4      --------->TGA1a                                                      --------->ANAC58      <---------TGA1a           <---------AHL20(2)                         --------->ANAC58        --    <------------OsbHLH66    <---------AHL20(1)                     <---------ICU4           <------- -----ARR11(3)               --------->AHL20(1)                  --------->YAB1           --------->WOX13(1) ---->GLK1(2)           --------->AHL20(2)                      <---------YAB1            --------->YAB1 ================================bZIP_DOF                     --------->YAB1--------->At4g35610  ---- ----GLK1(2)          <----------DOF2                    <---------YAB1    --------->ANAC46 <-------- >YAB1===========================bZIP_DOF            <---------WOX13(1)--------->YAB1  --------->TOE2(3)   tcttttgcacgtgccacttatacccttttaatattttttttatgtttttgtattgactgactattgatcataagtataagctacaaacacattaatcaat  23811000                                             <---------AHL20(2)                                     --------->ZAT2                                     --------->At4g35610                                 ------->TEIL--------->AHL20(2)                                --------->ANAC46                              --------->ANAC46          --------->AHL20(1)                              --------->ANAC55(2)       --------->AHL20(2) --------->AHL20(2)           --------->ANAC58          <---------AHL20(2) ------->TOE2(3)              --------->ANAC58   --------->YAB1 --ICU4                     <-----------GT1 --------->AHL20(2)                              ------>ZmHOX2a(1) ----->AHL20(2)          <---------ICU4     <---------AHL20(2)                  --------->YAB1<------ -ATHB12             <-------TEIL----------->RAV1(1) --------->YAB1            <---------ATHB12   tcattaaacagagaacacataaattcatttttacgcaccagctaaatttaatcaaaaataaaatgaagtatttgactgccaaacatgatatgtcctccac  23811100                            --------->AHL20(2)                         --------->AHL20(2)                      --------->YAB1         <---------AHL20(2)                    -------->P              <---------WOX13(1)                    ------>MYB83            <---------YAB1                                      <----               <-----------GT1--------->AHL20(2)                        --------->ZAT14     <--------        --------->YAB1--------->TOE2(3)  <---------YAB1           --------->YAB1         --------->CCA1(2) ------>ZmHOX2a(1)  ------>MYB46(1)  <---------TOE2(3)       <---------YAB1             --------->ARR14(2) --------->LBD16   ------>ZmHOX2a(1) <---------YAB1    <---------AHL20(2)               <---------ARR14(2) ---ALFIN1    <-----------GT1 <---------AHL20(2)       --------->AHL20(2)       <---------MYB52(1)   ttcctgataatcaaatttatcctaccataaatttatattaagtttgattaatggtatttttttatcaataacattgtactctgttatgcagatttgagta  23811200                                                                             --------->ANAC58                                                                          <------MYB46(1)                                                                          <------MYB83                                                                        <--------P                                                                       <-------GAMYB                                                                      <---------MYB46(3)                                        ----------->GT1               <---------DEAR3(2)                                   <---------ANAC55(2)               <---------ANAC58                                   --------->ANAC55(2)               <---------RAP2.6(2)                                   <---------ANAC55(1)               <---------ANAC58            <---------YAB1         <---------ANAC46                  <---------ANAC46            <---------TOE2(3)     <-------TEIL                       <---------DREB2C(2)           --------->AHL20(2)    --------->CCA1(2)                   <---------DEAR3(1)    ----------           <---------AHL20(2)   --------->ARR14(2)                 ------------>AtMYB77--------->At4g35610      <---------ARR11(3)        <---------ARR14(2)              --------->MYB52(2)    ----------->RAV1(1)      --------->ARR11(3)       <------ZmHOX2a(1)              <---------ANAC58      --------->At4g35610     --------->YAB1     --------->AHL20(2)                    <---------ANAC58   --------->At4g35610    <---------YAB1      <---------AHL20(2)                <---------GLK1(2)  --------->ANAC58    ---- -----ZAT14--------->YAB1    <---------TOE2(3)          --------->ICU4--------->MYB55(2) ---------->DOF2 -------AtSPL8--------->YAB1--------->YAB1      --------->ANAC46<-----------RAV1(1) <---------At4g35610   cagataatgatattaatattaagagtttaattaggatacgtatggtttaaacgaagccaagattgtttgtggcggttggaagcatcagcagcaaagaaaa  23811300  Previous    Next  AGI:  At1g64140.1    Description:  similar to loricrin-related [Arabidopsis thaliana] (TAIR:AT5G64550.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96565.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65880.1) Range:  from: 23807456    to: 23810822    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g64142.1    Description:  CPuORF23 (Conserved peptide upstream open reading frame 23) Range:  from: 23807456    to: 23810822    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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