Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                         <---------AHL20(2)                  --------->ATHB12                                                      --------->AHL20(1)             --------->AHL20(1)                                                         <---------AHL20(1)             --------->AHL20(2)                                                         --------->AHL20(2)             <---------AHL20(2)                                                      --------->ATHB51             <---------AHL20(1)            --------->ATHB12                          <---------ICU4            <---------AHL20(2)             <---------ICU4                            <--------ATHB1        <---------AHL20(2)              --------->YAB1                               --------->AHL20(2)        --------->AHL20(2)             <------ZmHOX2a(2)                             <---------AHL20(2)     --------->AHL20(2)               --------->ARR11(3)                            <---------ATHB51    --------->AHL20(2)                <---------ARR11(3)                            <---------ATHB12    <---------AHL20(2)               <------ZmHOX2a(1)                     <---------HSFB2a(1)    <-- ------->GT1--------->AHL20(2)     <---------TOE1(2)                       --------->HSFB2a(1)   ---- ->ATHB12--------->AHL20(2)  ------->TEIL <---------YAB1               <---------TOE2(3)<---------AHL20(2)   tgtaaaataaataaataaattgattagtatgaatttgtaggatcatcatttgagaaaaacgaatgagaaaactaagaattttctcaataatttaatatat  23783200                                    ------->MYC3          ---------->DOF2           <-------MYC3  ----------->GT1                <---------ALFIN1 ->ARR11(3)                   --------->PCF2          ------->TEIL --ARR11(3)                 --------->ANAC58          <---------------AtSPL8 ->AHL20(1)                 --------->ANAC58         <---------AtLEC2 --AHL20(1)         --------->HSFC1(2)             --------->AtLEC2                          -------- ->AHL20(2)         <---------HSFC1(2)   <---------WRKY18(1)                --------->ANAC55(2) --AHL20(2)--------->DAG2   --------->ANAC46    <---------ATHB12            <---------ANAC55(2)------ -------AHL20(2)    <---------HSFB2a(1) --------->WRKY12                   <-------TEIL      <------- ----->AHL20(2)     --------->HSFB2a(1) --------->WRKY38(1)  --------->ANAC46               ---------   taaatggtgaaataaagttggaaacttctcaagccccacatgttgacccattcatgcatgtacacatcaaatcgacatacgtatacatccactatattaa  23783300                                           <----------DOF2                                         --------------->AGL15                                         <---------------AGL15                                      <-----------GT1                                   <---------ICU4                                   --------->TOE1(3)                                  <---------AHL20(1)                                --------->TOE2(3) ->AHL20(2)   <---------AHL20(2)  <---------ARR11(3)                              <---------At5g28300 --->YAB1    --------->AHL20(2)   --------->AHL20(1)                             <-----------GT1   >> --AHL20(2)  <---------AHL20(2)   --------->AHL20(2)                       ------------>CBF --------- >YAB1<-----------GT1         --------->YAB1                             <----------ID1 >>>>>>>>>MYB98   tagttttttttcaaatttttttttttttggtatcaaaatattactcttttgagtttcgacatctactgagacattacgacaatttaccctaacaaaaaga  23783400                                                                    ----------->GT1                                                                   --------->ALFIN1                                                            --------->At5g28300                                                        <---------PCF2                                               <---------YAB1   --------->DAG2                      <---------ANAC46      <---------AHL20(2) ---------->DOF2 >>>>>>>TBF1         <---------TOE2(3)      <---------YAB1 ----------->GT1                     ------ ->DOF2     <---------ZAT6      --------->ARR14(2)      <---------PCF5----------->GT1   <---------DAG2   agaagaactaaatagtgttttatgaggtataccggttctcttgtttataatttttgagggaccgtaaaagtggagaaaatttcatactcaccttctcaaa  23783500                --------->ARR14(2)                      --------->LBD16                        ------                <---------ARR14(2)                     --------->HSFB2a(2)                  <--------     --------->At5g28300                             ------>ZmHOX2a(1)                      <--------    ----------->GT1                               <---------ATERF1(1)                      <--------- <---------DOF5.7(2)                       <---------ARR14(2)                      ---------->DOF2 --------->MYB52(1)   <----------DOF2 ----------->RAV1(1)                       --------->TOE2(3)  -- ---->DOF2 ----------->GT1<-----------GT1  --------->ARR14(2)                  --------->YAB1  <-----   agtaaacggtgaatagtgaatatgctttttacattttctccaacatatatggctcctccagagacatttttgtttatctaatcgtcaaagttttatcgtt  23783600                                                                                  <-------TEIL                                                                                ------------------>SPL14                                                                               --------->TGA1a                                                                               ======================                                                                         --------->ARR14(2)                                                               --------->At4g35610--------------->AtSPL3                                                               --------->ZAT2  <---------TGA1a                                                  <---------ANAC58       <---------ARR14(2)                                                  <---------ANAC46       <-----------HVH21      ----- --->DOF5.7(2)                                    <---------ANAC58    --------->ANAC58   --------->ANAC58 -TOE1(3)                                      <---------GLK1(1)      --------->ANAC46   --------->ANAC58 -TOE2(3)   <---------ANAC58                   --------->GLK1(1)      --------->ANAC58--------->SPL7 --GT1      <---------ANAC58 <---------------------WRI1  <---------REM1(2)<------ZmHOX2a(2) <-------- ------->TOE2(3)          <---------At4g35610 --------->ARR11(3)     <---------LBD16<---------SPL7--- ----MYB52(1)       ------>ZmHOX2a(1)         <---------ARR11(3)     --------->LBD16<---------SPL1(2)   accctaatctcatggcttcttcctcttcttctgcgagtcgtacttggagatatcgtgtcttcacgagcttccacggatcagacgtccgtacaagctttct  23783700                                                                                             --------                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                    <---------At4g35610                                                                                    --------->At4g35610                                                       --------->GLK1(2)          --------->ZAT14 ==bZIP_DOF                                            --------->ARR11(3)         <---------ZAT18 ---------------->WRI1<<<<<<<<<<<<<<<<<LFY            <---------GLK1(2)    --------->MYB46(3)-------- --DOF2            <-----------GT1              <---------YAB1           <-----------HVH21 ---------- ------>ANAC46----------->GT1                 --------->YAB1           --------->MYB46(3)--------->ANAC46   aagtcattttcgcaaacagtttaacaacaatgggattacaatgttcgatgatcaaagaatcttgagaggcgaaaccatcagccctgcgctcactcaagcg  23783800                                                          <---------MYB46(3)                                                         <---------ANAC46              ------>ZmHOX2a(2)                        <------MYB46(1)             <---------GLK1(1)                        <---------AtMYB61             --------->GLK1(1)                        --------->ALFIN1             <------ZmHOX2a(2)                       <---------ABI4(1)            --------->ARR14(2)                     --------->LBD16            <---------ARR11(3)                    <---------ANAC46            --------->GLK1(2)                     --------->HSFB2a(2)            <---------ARR14(2)                    <---------HSFB2a(2)            --------->ARR11(3)                    <---------ANAC58                           --------     --------->GLK1(2)                   <---------YAB1<------MYB83            --------->GLK1(2) ->ANAC58   <---------ARR14(3)      <---------ARR11(3)<---------DEAR3(1)      <---------ARR11(3)  --- ->ANAC58   <---------AGP1    <---------HSFB2a(2) <---------ANAC58            --------->ARR11(3) ---- >DOF2     <------ZmHOX2a(1)  --------->HSFB2a(2)<---------LBD16      <---------MYB46(3)    ---------   attagagaatcgaggatctctattgtattgctctcgaagaactatgcttcttccgggtggtgtttggatgagttgttggagattttgaagtgcaaggatg  23783900                                                 <---------LBD16                                         ----------->RAV1(2)                                         <---------At4g35610                                        -                                      <-------TEIL   <---------ARR14(2)                             <                                     <------ZmHOX2a(2)                                          <----                                    <---------ARR14(2)                                       <-------MYC3                                    --------->AGP1 ----------->GT1             <----------DOF2  <----   <-----------HVH21                <---------ARR11(3)                 --------->HSFB2a(2)   ------->MYC3 ->YAB1                             --------->ARR11(3)                 <---------HSFB2a(2)   ------->MYC4 ------>CCA1(2)                     --------->ARR14(2)    --------->MYB52(1)------>ZmHOX2a(2)<-------MYC2 ----->ARR11(3)                   ----------->ARR10--------->LBD16    <---------LBD16        ------->MYC2 >ICU4         <---------YAB1  <---------ANAC46 --------->ALFIN1  <---------HSFB2a(1)<---------ATHB12   atatgggtcaaatagtgatgactgtcttctatggagtagatccatctgatgtgcggaaacaaactggagagttcgggatcgctttcaatgaaacatgtgc  23784000                                                              <------NtERF2                                                           <---------ANAC58                                                           <---------ANAC58                                                          <---------ZAT2          <------ZmHOX2a(1)                               <---------At4g35610 -------->HSFB2a(2)                          <-----------RAV1(1) ---------HSFB2a(2)                 <----------DOF2       --------->At4g35610 -----ANAC58     ----------->GT1 --------->ANAC58         --------->ZAT2                <----------DOF2 -----ANAC58 <------ZmHOX2a(1)   --------->ANAC58   ----------->RAV1(1)          <---------MYB52(1)   ttgtagaacagaggaggagaggcaaaaatggagccaagctttgaactatgtgggcaacatagctggcgaacacttgctaaactggtatgtctttgatgaa  23784100  Previous    Next  AGI:  At1g64065.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G44000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49537.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 23782016    to: 23783192    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g64070.1    Description:  RLM1 (RESISTANCE TO LEPTOSPHAERIA MACULANS 1); ATP binding / protein binding / transmembrane receptor. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G16870.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63870.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G63880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16420.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR00015 Range:  from: 23783612    to: 23787112    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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