Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ANAC58                            --------->ANAC58                           --------->SPL7                         <---------SPL7                            --------->ANAC58                         --------->TOE1(2)                         --------->ANAC58             <----                       <---------TOE1(2)                           --------->ANAC46      <---------AHL20(1)                       --------------->AtSPL3              <-----------HVH21             --------->ARR11(3)                       --------->SPL7                     ------->GAMYB                  <---------ARR11(3)                     <---------SPL7                    --------->MYB52(1)                --------->AHL20(1)                  <-----------HVH21      <-----------------------TaNAC69(2)         --------->AHL20(2)    <----------DOF2<------NtERF2  ---------->DOF2      ----------->RAV1(1)          <---------AHL20(2)   gctcaactttggataaaacgcgtcggacgtacgaaaaaaagaagacttgcagagaaacaacagtcacacacacaatcacctcagatttaaaaatattcct  23773000                     <---------At4g35610                  --------->TGA2(2)                 <-----------HVH21                 <-----------TGA1                --------->bZIP60(1)                <---------bZIP60(1)               <-----------STF1              --------->MYB52(1)             ------->TEIL            <---------MYB52(2)               <-------TEIL      <---------ANAC58                   --------------->AtSPL8                                     <      <---------ANAC58                   <---------------AtSPL8                                     <      <---------ANAC46                <---------AHL20(2)                                      <------      <---------ANAC55(2)         --------------->AGL15                                      <------- ------DOF2 --------->MYB46(3)   ----------------->AGL3<----------DOF2                       <-------   ttggtattacttgaactaacgtcatccgagttgtttctatatatatgtacatatattctttacatgttatttatagctaattggaagtttttagtgctta  23773100             --------->YAB1            --------->AHL20(2)            <---------AHL20(2)   --------->STY1(2)                                               <---------------AGL15   <---------STY1(2)                                              <---------ANAC58 ---------ANAC58                                                  <---------ANAC58 ---------ANAC58<-----------GT1                                   <---------ANAC46 ---YAB1--------->ICU4                            --------->GLK1(2)--------------->AGL15       ------ --ANAC58  --------->AHL20(2)     --------->YAB1  <---------ARR11(3)                  <---------AHL20(2) --ANAC58<---------ICU4 <---------AHL20(2)        --------->ARR14(2)      <---------TOE2(3)    ------   ttgctagctactaattaataacgagtttaattctaatgaaaattggacacaaaatctgatactaagttgcctatataagattagaaatttaaactaataa  23773200                                     <---------ICU4                     --------->AHL20(1)                                     -------->HAHB4                     <---------AHL20(1)                                    --------->ICU4                     --------->AHL20(2)                                    <---------YAB1       --------->GLK1(1)                 <---------                                    <---------ATHB51     <---------GLK1(1)                 ----------                                  --------->YAB1         <---------RVE1(1)             --------->AHL20(2)                                 --------->AHL20(2)      --------->RVE1(1)             <---------AHL20(2)                                 <---------AHL20(2)      --------->CCA1(1)             --------->AHL20(1)                                 <---------YAB1          <---------CCA1(1)            --------->AHL20(2)   <---------ANAC55(2)   ------->TEIL--------->YAB1     --------->ARR11(3)            <---------AHL20(2)  <-------TEIL          <-----------GT1    <---------ZAT18--------->ARR11(3)  <---------YAB1 --->YAB1             <---------REM1(1)<-----------RAV1(1)<---------ARR11(3)  ----------->GT1 ------>AtMYB77      --------------->AtSPL8<-------TEIL <---------ARR11(3) <---------AHL20(2)   cagttacatatatacaaaatcgtgttgtacctcatataattatggtgcatttgaataagatatctattgaaaaatatataatgaaaaattaaattggtac  23773300                 --------->GLK1(2)                 <---------ARR11(3)              ---------->DOF2                --------->RVE1(1)          <---------AHL20(2)        <xxxxxxxxxxxxxxxxsmallRNA(i)       --------->AHL20(2)   --------->YAB1--------->ARR11(3)       <---------AHL20(2)                   <------------CBF  <---------ATHB12  <----------DOF2       <---------AHL20(1)                 <---------YAB1  -------- ------AtSPL8   --------->CCA1(1)         --------->AHL20(2)                 <---------AHL20(2)    -- ----->AtSPL8 --------->AHL20(2)     ------------>CBF                <------------CBF        <-------   tctaatcaaaaaaaaaaaaaatctttaacacatcaaatgttcaatttttttaaaagtccaaatcgttttgatattgttttttattgaagagcaaactact  23773400                                                                    ---------->DOF2                                                             --------->ARR14(1)                                                            --------->ARR14(2)                                                            <---------ARR11(3)                                                            --------->ARR11(3)                                                            <---------ARR14(2)      --------->ARR11(3)                                   --------->YAB1      --------->AHL20(1)                                  ----------->ARR10             --------->MYB52(1)      <---------AHL20(1)                                ===============================bZIP_DOF      <---------ARR11(3)             *TSS               ---------->DOF2      <---------O2   >>>>>>>>>>GT-3b                  --------->YAB1    ------>MYB46(1)        --------->O2  ---------- ------->AGL15                    --------->AtLEC2    ------>MYB83  ===================bZIP_DOF ------->YAB1                <-----------GT1         ----------->RAV1(1)     <---------TGA1a --------AGL15            <----------TaMYB80  --------->YAB1<---------GLK1(2)--------->TGA1a   ataagaaaaatatttgaagaaacatagcattttcccatgcataaactagaatgaccaacaaagatactctcaaagtctcacttgtctaaaaaacagataa  23773500                     ----------->GT1                                       --------->AHL20(2)                     <----------ID1           <---------DAG2           --------->AHL20(2)       -----                    ----------->GT1           <----------DOF2  <-------GAMYB                    -----        --------------->AGL15            --------->YAB1       <---------ANAC58    ----------->GT1----        =============================================================================================        <---------------AGL15            <--------ATHB1<-----------GT1 <---------AHL20(2)      <----- <---------ICU4   ---------->DOF2       <---------ATHB12      <---------ANAC58 <-----------RAV1(1) ->GT1----------------->AGL1            <---------ATHB51  <----------DOF2  <---------AHL20(2)  <-----   aaatcatttccaattttgagaaaaggaaaaaaaacaactccaataatactttttgattttcttttcgttgcattaaaataaatgtggcaaaaatccaata  23773600                                                  <---------WRKY12       --------->YAB1                            <---------MYB52(1)      <---------YAB1                            <-----------HVH21    <---------------AGL15                       --------->LBD16    --------------->AGL15                      <---------ANAC46   <---------YAB1                              <---------ANAC55(2) <-----------GT1                           --------->KAN4(2)                          <---------YAB1 ---->AHL20(2)                            <---------KAN4(1)                  --------->At4g35610 ---->YAB1                                --------->KAN4(1)                <---------ICU4 ----->AHL20(1)                           <----------TaMYB80       ----------->GT1  --------->YAB1 ===================MADS_MADS         ----------->GT1      <-----------GT1 --------->YAB1     ------>ZmHOX2a(2) ----ATHB51 ----------->GT1          --------->DAG2   <----------DOF2     <---------ATHB12  <-------- ----ATHB12----------->GT1          ---------->DOF2   <---------DAG2    --------->WOX13(1)  ---------   atattactattataagttaaaaaaactcaaaaaaaaaaaaaagtatattccgtcaactttttctcagtccggttcaatcatctccatcatcgttgatctc  23773700         <---------DOF5.7(2)        <---------WRKY12        <---------WRKY38(1)       --------->DOF5.7(2)                               <----------DOF2      --------->LBD16                <-----------GT1    <---------ANAC58      <-----------HVH21 --------->DAG2      <---------ANAC46     --------->ANAC46  ---------->DOF2<---------At5g28300<---------DAG2         ------>NtERF2 -ARR11(3)        <---------------AGL15     ----------->GT1            --------->ANAC46         <---- >ARR11(3)        --------------->AGL15--------->ANAC46 <---------ANAC58     ------->GAMYB <---------   tctctctccgtcaacgttctctctataaagcagagagtttcacagcgcgtgaaaaatggcttttcccacttagccacaacgacgcgtttcaattctccat  23773800                                    ------>MYB46(1)                                                --                                    -------->P                                                     --                                    ------>MYB83                                                   --                                   --------->MYB55(1)                                            ----                                  --------->MYB46(3)                                             ----                                  <---------MYB111(1)                                           <----                                  --------->DEAR3(1)                                            -----                                  --------->AtMYB61                  --------->O2              ------                                  <---------MYB46(2)                 <---------ANAC46      ------>ZmHOX2a(1)                                  <---------ALFIN1                   <---------ANAC55(1)  --------->TOE2(3)                                  <---------MYB55(2)                 <---------ANAC55(2)  --------->TOE1(3)                                  <---------MYB111(2)                <---------ANAC58  <---------ARR11(3) -----CCA1(2)             --------->HSFB2a(1)                        <---------ANAC58 --------->GLK1(1) --GT1          <----------DOF2  --------->MYB46(3)      <---------AHL20(2)           <---------GLK1(1)   ctctccctctctctctctctttcttcaaagattccaccaacctatacatatacttatatataatctatgctacgtgtatatacttccgatatccttcaac  23773900  Previous    Next  AGI:  At1g64060.1    Description:  ATRBOH F (RESPIRATORY BURST OXIDASE PROTEIN F); NAD(P)H oxidase. Identical to Respiratory burst oxidase homolog protein F (RBOHF) [Arabidopsis Thaliana] (GB:O48538;GB:O80342;GB:Q0WR97;GB:Q9SH56); similar to respiratory burst oxidase, putative / NADPH oxidase, putative [Arabidopsis thaliana] (TAIR:AT4G11230.1); similar to RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) [Arabidopsis thaliana] (TAIR:AT5G47910.1); similar to respiratory burst oxidase protein E (RbohE) / NADPH oxidase [Arabidopsis thaliana] (TAIR:AT1G19230.1); similar to respiratory burst oxidase protein F [Solanum tuberosum] (GB:BAB84124.1); similar to respiratory burst oxydase [Sol Range:  from: 23773437    to: 23780594    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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