Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->TOE1(1)     ------>ZmHOX2a(1) --------->ARR14(2)                                                                                <- <---------ARR14(2)                                                                                <- -------->GLK1(1)                                                                                  <- ---------GLK1(1)                                              --------->YAB1                 <------MYB83 ---->ANAC58                                                   --------->TOE2(3)              <------MYB46(1) ---->ANAC46                                                 <---------ARR11(3)              -------- ---->ANAC58  ----------->GT1                <---------YAB1 <---------CCA1(2)       <---------HSFB2a(2) --ARR10    ---------->DOF2  <------ZmHOX2a(1)         <----------ID1  <------ZmHOX2a(1)     <-------   gcaaatcctcgtagaaaagaaaatttgaagaggagagaacaaaattgatgaatgaataccacaaatcttaataggagcctcgagttcaagaagattaggt  23763800             --------->At4g35610           ------>ZmHOX2a(2)          <------ZmHOX2a(2)          --------->ARR14(1)         --------->AGP1         <---------AGP1         --------->ARR14(2)                                 ------->TEIL         <---------ARR11(3)                              ------->GAMYB         <---------ARR14(2)                            <---------At4g35610         --------->ARR11(3)                            --------->At4g35610         <---------ARR14(3)                          <---------WRKY38(1)       ----------->ARR10                             <---------WRKY12     ---------->DOF2                 <---------AHL20(2)----------->RAV1(2) --------ANAC58                  ----------->GT1    <---------MYB52(1) --------ANAC58      --------->At5g28300     --------->At4g35610                                <---- --------ANAC46<----------DOF2  --------->ARR11(3) --------->LBD16                          ------>ZmHOX2a(1) ->MYB59 --------->ARR14(3)     <---------ARR11(3) <-----------HVH21             <---------MYB52(1) --TOE2(3)--------->CCA1(2) ---------->DOF2  <---------At4g35610      ---------->ID1<-----------GT1   tgagtgagaaagatctgcttagcggtagaacaaagatgtttaatctcagcctccgtcaactgaacctgcttcgtcgtcttcccgtttttcgctcctagta  23763900                                                             ------>MYB83                --------->LBD16                                                             --------->MYB52(1)        <---------LBD16                                                     --------->ANAC46                <---------ALFIN1                         --------->ARR11(3)          --------->ANAC58               --------->SPL7                    <---------ZAT14                  --------->ANAC58               <-------TEIL                    --------->ZAT14             --------->YAB1                      --------->ZAT14                   <---------ALFIN1             <---------ICU4                      <---------ZAT14                   --------->AtMYB61           <---------ATHB12          <---------HSFB2a(2)                --------->ANAC46             --------->WOX13(1)          --------->HSFB2a(2)       <-----------GT1   <---------ARR11(3)<---------ATHB12  ------>MYB46(1)    --------->MYB59  <----------DOF2 --------->ANAC46       --------->WOX13(1)<---------MYB59   <---------ARR14(2) -------GT1    --------->MYB46(3) --------->YAB1--------->ZAT6>>>>>>>>>MYB98 --------->ARR14(2)   acctctttataacatcatccaccacactatcttccatcaaaatcaatcaatcactacgaaacctaacaaaaacctctcgaattcggtacaccggagcgat  23764000                                                   --------->YAB1                                                  ================================HOX2a_HOX2a                                                  <------ZmHOX2a(2)                                                  <---------ATHB12                                            <---------ARR14(2)                                            --------->ARR14(2)        <----------DOF2             ---------->ID1           --------->ANAC58   ----------->GT1            <-----------GT1           --------->ANAC58   <---------MYB46(3)------>ZmHOX2a(1) --------->CCA1(2)      --------->AtMYB61  <---------MYB52(1)      <-----------GT1     --------->GLK1(2)   gagataagagtttttttcgtcttcgacctccagtttcgaaacgccgtttccgatcaagatggttcaaaatcactttcctcttcgtagagaatcaatagag  23764100                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                             --------                                                <------ZmHOX2a(1) --------->ARR14(2)         ========                           --------->CCA1(2)    --------->ATERF1(1)          --------->MYB52(1)   ===                        <---------TOE2(3)      <---------ATERF1(1)--------->GLK1(2)     ----------->GT1                        <---------TOE1(3)     --------->ALFIN1    <---------ARR14(2)   <------ZmHOX2a(1)            <---------ANAC46        >>>>>>>>>TBF1                <---------GLK1(2)    ----------->GT1   agagaagagaggttttgtggtatgtgaaggtatgagaagaagaagacggaggagccctagacagagagaatcggctagagaacggggaaggagaaaaaag  23764200           <---------RAP2.3(1)          <---------RAP2.3(2)          <---------DEAR3(1)         --------->SPL7       <-------MYC4       <-------PIF5       ------->PIF5       ------->MYC3       ------->MYC2       ------->MYC4       ------->PIF4       <-------PIF4       <-------MYC3       <-------MYC2      --------->O2      ==========================================bZIP_DOF      <---------TGA1a                                                   <---------AHL20(2)      <---------O2     <---------LBD16                  --------->AHL20(2)      --------->TGA1a ------->TEIL                     <---------AHL20(2)      ==========================================bZIP_DOF<---------AHL20(2)     ------------>OsbHLH66                             --------->AHL20(2)    <------------OsbHLH66        <---------DEAR3(1)    --------->AHL20(1) -------->ANAC58     *TSS        <---------RAP2.6(2)   <---------AHL20(1) -------->ANAC58    <---------ZAT14               <---------MYB59     <---------YAB1 ------->DOF2      ----------->HVH21 <----------DOF2------>MYB83     <---------AHL20(2)    <---------ARR14(2) -->DOF2--------->ALFIN1        --------->RAP2.6(3) ------>MYB46(1)<---------YAB1          --------->ARR14(2) ===============bZIP_DOF      ----------->HVH21<-----------GT1<-----------GT1         --------->ALFIN1 ===============bZIP_DOF --------->LBD16   <----------DOF2  <---------AHL20(2)   ---------->DOF2   gaaagcacacgtgcggctcgtgtgaaccggaagggacggctttgtcttttgaccaaatttattttttctattattttaaaaactaaagatggggatactc  23764300                  <---------YAB1                <---------AHL20(2)                --------->AHL20(2)                <---------ICU4                --------->ATHB51                            <-----------GT1               --------->ICU4                           --------->AHL20(1)             <---------ICU4              <---------ICU4 <---------AHL20(1)             --------->YAB1        <---------ANAC58     <---------ARR11(3)            <---------AHL20(2)     <---------ANAC46     --------->ARR11(3)            --------->AHL20(2)     <---------ANAC58  --------->AHL20(2)        <---------AHL20(2)      <---------RAP2.6(2)----------->GT1        <---------YAB1         <---------LBD16   ---------->DOF2                             --------    <---------AHL20(2)      ---------->DOF2   <---------ANAC55(2)         --------->YAB1     <-------   ttacattttttttattaattatttttgtcaaaatgcggcttgaatattacataaagaaaatatttctatactattttcatattttgaagtccgaataatt  23764400                                                                                                   <-                                                                                                <----                                 <---------ANAC46                                      --------->YAB1                                 <---------ANAC58                     --------->HSFB2a(2)      <-----                                 <---------ANAC58                     <---------HSFB2a(2)<---------YAB1 --------->YAB1             --------->HSFB2a(1)                  ------->MYC3         <---------AHL20(2) ->ATHB51                   <---------HSFB2a(1)                  <-------MYC3     <---------AHL20(2) --AHL20(2)           <---------LBD16--------->ZAT6             --------->O2      --------->AHL20(2)   tgatcaaaatcgatgcttcatttttgtggaatcttgcttagactagtcatcaaatatgtctcttcaacgtgtccagaagtatatttatattatgattttt  23764500                                                                             --------->MYB52(1)                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                          --------->ANAC55(1)         <----------DOF2                  ----------->GT1                 --------->ANAC55(2)    <<<<<<<<<TBF1                   --------->GLK1(2)                     <---------ANAC55(2)  <------------------------ANAC81   <---------ARR14(2)                    --------->ANAC46 -----------------------ANAC81--------->TOE2(2)                      --------->YAB1 --------------------ANAC81   --------->TOE1(2)                  <---------AHL20(2) ------GT1    <-----------GT1----------->RAV1(2)<---------AHL20(2)  <---------YAB1       ------>NtERF2   ctcttcttcttctttttttcttcttgccaatacctgagaatattgtgtaattaagttgtttagataatttatgaaaacgtaacgaagactctgccaacgc  23764600                                       <---------YAB1                                       ------->TEIL                                  <---------AtLEC2                 --------->CCA1(2)       <---------WOX13(1)                                 <-------TEIL           --------->ANAC58                  >>>>>>>>>ARR1                               <-------MYC2             --------->ANAC58                  >>>>>>>>>ARR2          ----------->HVH21    ------->MYC2          <---------REM1(1)      ------>ZmHOX2a(1)        --------->O2           ------->MYC3     --------->ICU4     <------ZmHOX2a(2)     --------->ATHB12        --------->ANAC46       <-------MYC3----------->GT1         ================HOX2a_HOX2a   <---    --------->AtLEC2        <---------ALFIN1 <---------YAB1       --------->AGP1        <---------YAB1   ttatccatccacatgacatagccaaattccacacatgcatgaatattgtaataagttgaagcaatatagatccaagtcctattggcccatatgattgttt  23764700  Previous    Next  AGI:  At1g64040.1    Description:  TOPP3 (Type one serine/threonine protein phosphatase 3); protein serine/threonine phosphatase. Identical to Serine/threonine-protein phosphatase PP1 isozyme 3 (TOPP3) [Arabidopsis Thaliana] (GB:P48483;GB:Q9SH54); similar to TOPP7 (Type one serine/threonine protein phosphatase 7), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT4G11240.1); similar to Serine/threonine-protein phosphatase PP1 (GB:P48488); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186) Range:  from: 23761946    to: 23764221    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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