Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->CCA1(2)                                --------->ARR11(3)                                <---------ARR11(3)                            ---------->DOF2                                                     <<<<<                           --------->AHL20(2)                                                  ------                       --------->AHL20(2)                                                      <-----                      --------->AHL20(2)                                                 <<<<<<<<<<MYB80  ----------->GT1     <---------ATHB12                                                  <------MYB83 -------->DOF2    ------------>CBF                                  --------->MYB52(1)  <------MYB46(1)   caaaagctaaaaccattttttccaataaataaaagatactagactatttcaaatttgtcaaaaacagagcaaacagagtattagtacatttggtttgaaa  23755400                                                                           <---------WOX13(1)   <---------ZAT14                                                       --------->ATHB12   --------->ZAT14                                                    ---------->DOF2    ------->GAMYB --------->ANAC46                             --------->GLK1(2)    <---------HSFB2a(2)   --------->ANAC46 <<<<<GATA-1                     <---------GLK1(2)               <---------ATHB12       --------->MYB46(3) --->GLK1(1)            <----------DOF2---------->DOF2       <---------ATHB12   ------>ZmHOX2a(2) ----GLK1(1)          --------->At4g35610    <---------GLK1(2) --------->WOX13(1)  <------ZmHOX2a(2)   tccactgaagagtgaagcctaatcagctttgaaaaaattctcaaagagattcttggaagacgaatcaatcgagaaagattgatcgatccaagcgccattt  23755500                                                                                                  ===                                                                                                  <--                                                                                                  ===                                                                                               <-----                                                                                               ------                                                                                              <------                  <------NtERF2                                                               <------                 ------>NtERF2                                                               ========                --------->RAP2.6(2)                                                          ------>ZmHOX2a(2)                --------->DEAR3(1)                                                           ========                --------->RAP2.3(3)                                                         ---------                --------->RAP2.3(2)                                                         <------ZmHOX2a(2)               --------->ORA47(2)                                                           =========               --------->DEAR4(2)                         --------->LBD16                   ---------               --------->ATERF1(1)                       --------->ANAC58                  <---------ARR14(2)               --------->RAP2.3(1)                       --------->ANAC58                  --------->ARR14(2)               <---------RAP2.6(2)  <---------At4g35610 <---------LBD16                    --------->ARR11(3)              <---------ATERF1(1)   <------NtERF2      <---------bZIP60(2)                 <---------ARR11(3)          <---------MYB52(1)        --------->At4g35610<---------ANAC46                    --------->ARR11(1)         <-------GAMYB            <---------WRKY12  ----------->HVH21                     <---------HSFB2a(1)        <---------MYB46(3)       <---------MYB52(1) ----------->TGA1                      <---------GLK1(1)        ------>ZmHOX2a(2)<-----------GT1       --------->YAB1                            ----------->ARR10  --------------------->WRI1    <-----------TGA1  <---------ICU4         <---------At4g35610=========  <----------DOF2<------NtERF2  <-----------HVH21--------->ICU4          --------->At4g35610=========   gccactttgatcgttgggccgcctatattactaccgtcagcgaagacagtagtaatgacgcggaagacggagttgagctcatcgatagaagaagatccga  23755600        <---------ARR14(2)        --------->ARR14(2)       ===============HOX2a_HOX2a    ------>NtERF2       =====================HOX2a_HOX2a       <------ZmHOX2a(1)           <------NtERF2  ====================HOX2a_HOX2a  --------->ATERF1(1)  <------ZmHOX2a(1)               <---------ATERF1(1)  ==========================HOX2a_HOX2a                                     <---------DEAR3(1) ===========================HOX2a_HOX2a                                    <------NtERF2 ----ZmHOX2a(1)                   --------->LBD16                         ------>NtERF2 =====================HOX2a_HOX2a ------>NtERF2                    <---------MYB46(3) ----LBD16                       <---------ANAC46                 --------->ARR14(2) --->LBD16                     --------->MYB52(1)                 <---------MYB52(1) ---TOE2(1)                   ----------->HVH21  <---------ICU4  --------->At5g28300 ---TOE1(1)            ---------->DOF2           --------->YAB1  <-------GAMYB ========HOX2a_HOX2a <------ZmHOX2a(2)   <---------At4g35610   <---------ANAC46 =============HOX2a_HOX2a  --------->ARR14(2)   --------->ICU4<---------ZAT14 >CCA1(2)           <---------ARR11(3)   --------->At4g35610  --------->ZAT14<---------DEAR3(2) ====HOX2a_HOX2a   --------->GLK1(1)<---------PCF5       <---------ZAT14  <---------RAP2.3(1) >ARR14(1)     ------>ZmHOX2a(2)<---------LBD16 <---------ATHB12<---------MYB46(3) ========HOX2a_HOX2a--------->ARR11(3) <-----------RAV1(2)--------->ZAT6 --------->ANAC46 =============HOX2a_HOX2a  <---------ARR14(2)  <---------RAP2.6(3)<---------ARR14(2)   ggaaggagaggatttgatcggagatcaaagaactgccggggccagaggccatcatggtgaacactgcggttattgacgccggtgagaaaacgttgttaga  23755700                                    <---------ICU4                             ---------->DOF2                           --------->ANAC46                                                        --                           --------->ANAC58                                                        <-                    --------->CCA1(2)                                ------>ZmHOX2a(1)       <-------                 ----------->ARR10  --------->YAB1    <---------ANAC58                  <----------DOF2       <---------ZAT14     --------->ANAC58           <---------ANAC58      ------>ZmHOX2a(1)<-------   gtgtttggctacagtagagaagagatgccacgaaagaatcatcgcgacttcgttttgcttcttcatagctccttcatcctccatttctgactttgacttg  23755800                                            <---------ICU4                                            -------->HAHB4                                            --------->YAB1          <----------DOF2                               ----------->HVH21                 ------->TEIL                              --------->LBD16                    <---------ARR11(3)                             <---------ANAC58                    --------->ARR14(2)                             <---------ANAC55(1)                 <---------ARR14(2)                             --------->ANAC55(2)                <---------CCA1(2)                             <---------ANAC55(2)             ------->MYC2                             <---------ANAC58                ------->MYC3                             <---------ANAC46 <---------YAB1 <-------MYC3                    --------->ANAC58       <---------YAB1    <-------MYC2                 --------->ARR11(1)        --------->ICU4   ===================bZIP_DOF                 --------->ARR11(3)      --------->YAB1     <---------ANAC46                 <---------ARR14(2)      <---------ICU4     --------->ANAC55(2)                   ---      <----------ID1--------->ANAC58    --------->ICU4      <---------ANAC55(2)                   ---  ---------->DOF2--------->ARR14(2)   --------->YAB1        --------->TGA1a                    ------ ------->At4g35610--------->GLK1(1)  <---------YAB1         <---------TGA1a                ---------- --------At4g35610--------->CCA1(2)  --------->ICU4         <---------O2               --------->TOE2(3) --ANAC58        <---------ARR11(3)  <---------ATHB12       ===================bZIP_DOF--------->TOE1(3) --ANAC58      ----------->ARR10 ------------>CBF           --------->O2     ---------->DOF2 <-------   cagcgaaagcgataagagagatatgcaacttccgtgacaatgataatgatgactcatcactcacgtgtatctttgtagtaaaagtataaacttaacaatg  23755900                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                 --------->ANAC58                                                            <------------CBF                                                          <---------AHL20(1)                                                          --------->AHL20(1)                                                          --------->ARR11(3)                                                       <---------AHL20(2)                                                       --------->AHL20(1)                                                       --------->AHL20(2)              <---------ANAC58 ------>ANAC58                                         <---------AHL20(1)              <---------ANAC58 ------>ANAC58                    --------->ANAC58  --------->YAB1         ---------->ID1 ----------- ----->TGA1                       --------->ANAC58 <---------ATHB51    <----------DOF2 <---------ANAC46 -->CBF              <------------CBF <---------At4g35610 <---------AHL20(2)        <----------DOF2 --ICU4   ---------->DOF2<---------TOE2(3)     ------------>CBF<-----------GT1   <-----------GT1-----   acgctactctttgaaagcttcaaaattgaggctagtatgcaactgcttaaacaataataaaatattgacgctactttgttttttttctttcgtagtaaaa  23756000                                                 ------>ZmHOX2a(2)                                                <---------GLK1(1)                                                --------->GLK1(1)                                      ----------->RAV1(1)                                   --------->ANAC58                                   --------->ANAC58      <-----------------AGL1                                   --------->ANAC46     <---------MYB52(1)                               --------->ANAC58 <------ZmHOX2a(2)                             ---------->DOF2   <---------AGP1                        <---------ANAC46       --------->ARR11(3)                        <---------ANAC58       <-----------ARR10 >GT1        <------ZmHOX2a(1) --------->ANAC58<---------ARR11(3)      --------->YAB1           <---- ---->AHL20(2)          <---------ANAC58   ---------->DOF2       --------->YAB1       ---------->ID1   atatagaaaacataaggaaatagttttcgtgaaaagcaagcaacacaaagatctctccgttcagaaatggtaatggtaagactgttttgtctcatagatt  23756100                                                                  <---------YAB1                                                            <---------YAB1                   <-------                                                          <---------ICU4                     --------                                                          -------->HAHB4                     <-------                                                          --------->YAB1                     --------                                                         --------->ICU4                   --------->AHL20(2)                                                       <---------ICU4                   <---------AHL20(2)                                                       --------->ATHB51               <---------YAB1          --------->AtLEC2                             <--------HAHB4                --------->AHL20(1)          --------->ANAC58                             -------->HAHB4               --------->AHL20(2)      ------->GAMYB                                    --------->YAB1               <---------ICU4     --------->ANAC46                                  <--------ATHB1               --------->ATHB51     --------->ANAC58                                 --------->ICU4                <---------AHL20(2)     --------->ANAC58                                 <---------ATHB51             <---------YAB1    ------>MYB46(1)                                   <---------YAB1               --------->ICU4    ------>MYB83     --------->AHL20(2)               --------->AHL20(2)         --------->YAB1  --------->AtMYB61  <---------AHL20(2)           --------->AHL20(2)            <---------YAB1 ---TEIL  --------->ANAC58                      ----------->GT1------->TEIL     <---------AHL20(2)   cataccaacgccatgcaaactatataaatgtgaattttaaacaaattagtaagttaataattatgaacatgattttgtatgtataattattttaaaatat  23756200         --------->ANAC46     --------->CCA1(1)       <---------DOF5.7(2)    --------->RVE1(1)      --------->ZAT14     --------->AHL20(2)      --------->ARR14(2)  <---------AHL20(2) --ARR11(3)         ----------->GT1 ->AHL20(1)         --------->YAB1                                      <----------DOF2 --AHL20(1)     <---------WRKY12                                <---------YAB1 ->ARR11(3)   <-----------HVH21--------->ARR11(3)             <-----------GT1   tcaaacagtaaacgcaggtcaattgtaaaaaaatatccagatgtaatagacaatttgattcagtttacgattcacttttaagaacatagaatagtactag  23756300  Previous    Next  AGI:  At1g64020.1    Description:  serpin-related / serine protease inhibitor-related. similar to serpin family protein / serine protease inhibitor family protein [Arabidopsis thaliana] (TAIR:AT1G64030.1); similar to putative serpin [Arabidopsis lyrata] (GB:AAO42472.1); contains InterPro domain Protease inhibitor I4, serpin; (InterPro:IPR000215); contains InterPro domain Protease inhibitor I4, serpin, plant (InterPro:IPR015554) Range:  from: 23755419    to: 23755784    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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