Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->WRKY12                                                      --------->WRKY45                                                      --------->WRKY38(1)                                                     --------->DOF5.7(2)                                                <---------GLK1(2)                                                --------->ARR14(2)                                                <---------ARR14(2)                            -------                      <----------DOF2     <---------ARR14(2)                                  -------                <-----------TGA1       <---------ANAC58    --------->ZAT14                    -------       --------->TOE2(3)               <---------ANAC46    <---------ZAT14            <---------MYB46(3)   ---------->DOF2   <---------ICU4    <---------ANAC58<---------WRKY18(1)   ---------->DOF2  <------ -------DOF2 --------->ARR11(3) --------->TOE1(3)    <---------MYB52(1)      <---------AHL20(2)  ---- -----ICU4   <---------ARR11(3) --------->TOE2(3) <-------TEIL              --------->AHL20(2)------- --TGA1--------->TOE1(3)    ---------->DOF2  <---------TOE2(3) <---------MYB52(1)     <-----------RAV1(1)   ttttccaaagcttaatatcgtcatcttttccaaagcttaatgcgtttatggattcgttgactgcagtttgtttctgcattaaatcgatttgttgccacgt  23731200                                 <---------ANAC58                             <---------At5g28300                                 <---------ANAC58                       --------->ARR11(3)   <-----------GT1    ----------->GT1                                   <---------ARR11(3) -->ANAC58          --------->LBD16                                    --------->YAB1 -->O2             <---------ANAC58                               --------->AHL20(2) -->ANAC58         <---------ANAC46                       <----------DOF2 <---------ICU4 ---ANAC55(2)      <---------ANAC58        <---------ANAC58    --------->TOE2(3) --->TEIL<----------DOF2     ---------->DOF2         <-----------GT1  <---------YAB1 -->ANAC55(2)    <---------At5g28300       <---------ANAC58  <---------YAB1  <-----------GT1  <------   attttttacttcttttttttgccgtggtaacaaaagcttgggtttacttgttgtataactcttttcattaatatgatatttacagtttgacaaaaaaaaa  23731300                                                                                            <--------                                                                                          <----------                                                                                     --------->YAB1                    <---------GLK1(1)                                                --------->AHL20(2)             --------->ATHB12                                                  --------->ANAC58             <--------ATHB1         --------->YAB1                             --------->ANAC58             --------->ATHB51       <-----------GT1                            --------->ANAC46 -----             <---------ICU4        <---------YAB1                              <---------ANAC55(2)            <---------YAB1  --------->YAB1                                     --------->ANAC55(2)       --------->YAB1    --------->WOX13(1)                                    --------->ANAC55(1) --  --------->AHL20(2)--------->GLK1(1)                       ----------->GT1    ----------->GT1  ----- ----ID1    --------->ICU4 <---------ATHB12             ---------->DOF2 <---------YAB1--------->AHL20(1)   caaaaaaaatcagaataattggaaatccaatcatattatcacagttttcatttaccaaaaaagagtataatgtcatgactcacgtaataatattactata  23731400  <-----------GT1                                            <---------ARR14(2)               -------  --------->MYB52(1)                                         --------->MYB52(1)              -------- --------->ICU4                                         --------->ANAC58                    --------- -YAB1             <------ZmHOX2a(1)               <---------ZAT18                     --------->CCA1(2) -GT1  --------->ARR14(2)                          --------->ZAT18                  --------->ANAC58 ---->YAB1--------->TOE2(3) ----------->GT1    --------->MYB52(1)                   --------->ANAC58 ------->YAB1     <----------ID1       --------->DAG2   --------->ANAC58       <---------ETT(1) ------>GT1   <---------REM1(2)       ---------->DOF2<---------ZAT18       <----------DOF2  <--------   gtaataacgaaacctctacaaggacaaaactggaaacaaaaaaaggagataactgcgcacgaagaacgggtctcaagctttccgacaagacatgcgcacc  23731500                                                      *TSS                                                  <---------ATHB12    --------->AHL20(2)                           --------->ARR14(2)    <---------AHL20(2)                           <---------ARR14(2)                              ----   --------->AHL20(1)                       ------>MYB46(1)                                     -----   <---------AHL20(2)                       ------>MYB83                                        -----   --------->AHL20(2)       ------>ZmHOX2a(1) ------------>CBF                                  -----   <---------AHL20(1)--------->AHL20(2)   --------->AtMYB61                            <---------YAB1 ---->RAV1(1)        <---------AHL20(2)  --------->HSFB2a(1)       <----------DOF2   <---------ICU4 ->ANAC46          ----------->TBP       <---------HSFB2a(1)  <<<<<<<<<TBF1          --------->YAB1 - >ZAT18         --------->LBD16     <---------HSFB2a(2)    <<<<<<<<<TBF1            <---------ATHB12- -ZAT18        <---------ANAC46     --------->HSFB2a(2) <<<<<<<<<TBF1     ------>ZmHOX2a(1)    <-----   acaaatttatttagtctccgtatataaatcctccatttccaaaaccttcccaatcttcttcttcttcttctttctccttcaaacaaatcatgagacctgc  23731600                                                                   ------->GAMYB            <--------       <---------ICU4                                    --------->O2                       <--------  <---------ARR11(3)              --------->ARR14(2)     --------->ANAC46          <---------ARR14(3)  --------->ARR11(3)              <---------ARR14(2)     <---------O2              --------->ARR14(2) ----->LBD16              --------->LBD16             <---------DEAR3(1)           <---------AGP1---- ---->ANAC58            <---------LBD16               --------->ETT(2)             --------->ARR14(3) ---->ANAC58       <---------ANAC46          --------->MYB46(3)   --------->MYB46(3) ------>ZmHOX2a(2) ---->ANAC46       <---------ANAC58         --------->ANAC58      <---------MYB52(2)<------ZmHOX2a(2) -------->ANAC58   <---------ANAC58   <-----------HVH21  --------->bZIP60(2)       --------->ARR11(3) -------->ANAC58  --------->MYB52(2) --------->ANAC46 --------->DEAR3(1)           <---------ARR11(3) ----LBD16   <-------TEIL <------NtERF2     --------->ANAC58   --------->MYB46(3)  <---------ARR14(2)   gcaagataatcaaggctcgttccttggccggattagtatccgtcgcaaccaattcgtcgacgtcaacaacgaacaagaacaagaagatctcgagcttttc  23731700                                                                                         ------>NtERF2                                                                                        ----------->HVH21                                                                                       ------>NtERF2                                                                                   <---------ARR14(2)                                                      <---------MYB52(1)        <---------ANAC58                                                     <-----------HVH21          <---------ANAC58                                                    --------->DEAR3(1)          <---------ANAC46                                                    --------->DREB2C(2)         --------->ANAC55(2)                                                 <---------ALFIN1          <---------HSFB2a(1)                                                 --------->AtMYB61         --------->HSFB2a(1)                    <-----------GT1              --------->DEAR3(1)        <---------At4g35610               ==============================HOX2a_HOX2a --------->At4g35610<---------ANAC58               =================================HOX2a_HOX2a                <---------HSFC1(2)               ------>ZmHOX2a(2)                --------->MYB46(3)         --------->HSFC1(2)              <------ZmHOX2a(2)                 <---------MYB55(2)       <--------P--------->ARR14(2)              ==================================HOX2a_HOX2a              ============================              ===============================HOX2a_HOX2a <---------At4g35610<---------ANAC58   ------             <---------ARR14(2)               ------->GAMYB             --------->At5g28300<---------DEAR3(1)             --------->ARR14(2)       ------>ZmHOX2a(1)<-----------RAV1(2) --------->At4g35610 <-----     --------->ANAC46<---------At5g28300     <---------MYB55(2)       --------->ANAC46 --------->LBD16 --DOF2    --------->DEAR3(1)  <----------DOF2--------->AtMYB61       --------->ANAC58--------->RAP2.6(2) -DAG2  --------->DEAR3(1)<---------ZAT2     --------->MYB46(3)       --------->ANAC58--------->ANAC46 ----------------->WRI1--------->DEAR3(1)------>ZmHOX2a(1)        <-----------GT1--------->LBD16   <-   caaaaacacatcgccgatcgtttcaccgagcttctttctcctcctcaaccaccaccgtcagatgaaattaacacggtagcttccgtagccgcgacggagc  23731800            <---------bZIP60(2)            <---------O2            <---------ANAC46            <---------ANAC58            <---------TGA1a            <---------ANAC58            =========================================MYC_MYB         <---------MYB52(1)                          <---------At4g35610         ----------->HVH21                           --------->ZAT2        --------->LBD16                              <---------ZAT2                               <--       --------->ANAC55(2)                           --------->At4g35610                  -----------       <---------ANAC58                             --------->GLK1(2)                     <---------ETT(1)       <---------ANAC58          ------->TEIL    <---------ANAC58                        --------->MYB46(3) =====================MYC_MYB <---------WOX13(1) <---------ANAC58                        --------->DEAR3(2) --->At4g35610           --------->At4g35610 <-------GAMYB                           ----------->HVH21 ----At4g35610           <---------At4g35610<-----------RAV1(1)                    <---------ANAC58 --------GLK1(2)         <---------ZAT2   ------>ZmHOX2a(1)   ---------->DOF2      <---------ANAC58--   agattatgtccgtgacttggcttcgtaagctgatggatgttttcctctgttgcgaagctgaattcaaagcgattttgttaatgggtcgtgacccgaccca  23731900                        --------->MYB59                        --------->MYB52(2)                      <---------MYB52(1)                     <---------MYB52(1)                <-----------GT1               ----------->HVH21            <----------DOF2           <---------DAG2           <----------DOF2                                                         <---------TOE1(3)          <------NtERF2 ----------->ARR10                                         <---------DOF5.7(2)         ------>NtERF2<--------P                                                  --------->MYB52(1)         <---------RAP2.6(3)                                                    --------->DOF5.7(2)        --------->RAP2.3(3)                                                   <---------MYB46(3)        --------->DEAR3(1)                                               ------>NtERF2        --------->RAP2.3(2)                                             --------->DEAR3(1)      <---------At4g35610                                              --------->DEAR3(2)      --------->At4g35610     --------->LBD16                          --------->MYB46(3)     --------->ANAC46<-----------HVH21                                --------->SPL7 ------->GAMYB<-- -------GLK1(2)--------->WRKY38(1)                          ----------->HVH21<---------MYB52(1)  <--- >HVH21 --------->RAP2.6(2)   ------>ZmHOX2a(1)            <----------DOF2  <-------GAMYB       <---- ------->GLK1(1)<---------WRKY18(1)                 ---------->DOF2   <---------At5g28300       <----   gatttctaagccgccttttgaccggttagttcctgaaatgttagaccggtcgattaaagcgcttgacatttgtaccgccgttgttaacggtatcgattcc  23732000                                                                    <---------ANAC46                                                                    =============================MYC_MYB                                                                    <---------ANAC58                                                                    =========================bZIP_DOF                                                                    <---------ANAC55(2)                                                                    <---------ANAC55(1)                                                                    <---------TGA1a                                                                    --------->TGA1a                                                                    --------->O2                                                                    --------->ANAC55(2)                                                                --------->DOF5.7(2)                                                              <---------ANAC46                                                            --------->MYB52(1)                                                           ----------->HVH21                                                           ----------->TGA1                                                         <---------At4g35610                                                         <------MYB46(1)                                                         <------MYB83                                                         --------->ANAC55(2)                                                         <---------ANAC55(2)                                                         --------->At4g35610                                                        --------->MYB52(2)                                                        --------->MYB111(1)                                                        <---------MYB46(3)                                                        --------->MYB55(2)                                                        --------->MYB59                                                        --------->MYB46(2)                                                        --------->MYB111(2)                      ----                                                       <---------MYB55(1)                        <---                                                      <---------MYB52(1)      --------->At4g35610<---                                   ------>NtERF2      <<<<<<<<<MYB98<---------O2  ---------->DOF2----                                  <---------RAP2.6(2)<-------GAMYB  <---------ANAC58             ----                                  <---------ANAC46   <-----------HVH21        <---------At4g35610<---                                 --------->RAP2.6(3)<---------MYB46(3)    <------ZmHOX2a(1)     <---- -------MYB52(1)               ----------->HVH21   <-------TEIL --------->At5g28300             <---- ----GAMYB                    <-----------HVH21 --------->MYB46(3)<---------DOF5.7(2)        <------NtERF2 -----ANAC58      <---------At4g35610 ========================================bZIP_DOF     <---------DEAR3(1) -----ANAC58      --------->At4g35610 <----------DOF2=========================MYC_MYB    <-------GAMYB   gttagacattaccagcgtttagctgagattgctgtgacggctttggagcaacgtccgttaggtgacggtaacgtgaggagagctaaacgcgcgttggcga  23732100  Previous    Next  AGI:  At1g63920.1    Description:  pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 35% identity and 1.4e-51 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus} Range:  from: 23730169    to: 23731244    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g63930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G23530.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64338.1); contains InterPro domain Protein of unknown function DUF793 (InterPro:IPR008511) Range:  from: 23731554    to: 23732996    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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