Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------At4g35610                                                                  --------->ZAT2                                                                  --------->At4g35610                                                              --------->MYB52(1)                                       --------->At4g35610<---------------AtSPL8                                       <---------ZAT2     --------------->AtSPL3                                       <---------At4g35610--------------->AtSPL8                                 <----------DOF2       --------->ANAC58     --------->At5g28300                                --------->TOE2(3)      --------->ANAC58    ----------->GT1                              ------>MYB46(1)      --------->ANAC58      --------->ZAT2                              ------>MYB83         --------->ANAC46      <---------ZAT2                              -------->P           --------->ANAC58      --------->At4g35610      <---------YAB1         <---------ALFIN1      --------->AtLEC2    ------>ZmHOX2a(1) ---->MYB52(2)              <---------ALFIN1<---------------AGL15 <---------ZAT2        ----------->RAV1(1)   gttgcatcatcagtaagagtgacattagccccaacctttgcagctactaaaccaggcaaggaagtaccagctcctagctgtaaattccatcaacacaagt  23704200                                    --------->ATHB12                    ------>ZmHOX2a(1)                                 <---------ATHB12                   <---------MYB59 <-------TEIL        --------->ARR14(2)            ---------->DOF2    <---------TOE1(3)       <---------ARR14(2)       --------->TOE1(3)       <---------YAB1         <---------GLK1(1)       --------->TOE2(3)       <---------TOE2(3)      --------->GLK1(1)       ----------->GT1  <---------AHL20(1)            <---------CCA1(2)<---------ICU4      ----------->GT1  --------->YAB1    --------->At4g35610  --------->GLK1(2)                 -----   ctaagaaaacgttaaaaaggtcctaacatatttaagattcattagctcaaacacacatatcccaattctgtaatcaattcaaaatcaagggattttagca  23704300                                                        --------->ALFIN1                                                        <-----------RAV1(1)                                                     =================================HOX2a_HOX2a                                                     ------>ZmHOX2a(2)                                                    ==================================HOX2a_HOX2a                                                    --------->CCA1(2)                                                    <------ZmHOX2a(2)                                                   --------->ARR14(2)                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                                   --------->AGP1                                                   <---------AGP1                                                   <---------ARR14(2)                                                  <---------GLK1(1)                     <---------REM1(2)                                         --------->ANAC46                           --------->ANAC58                                         <---------ANAC55(2)                        --------->ANAC58                   <-----------GT1       --------->ANAC58                      <------ZmHOX2a(1)   <---------MYB46(3)                    --------->ANAC55(2)      --------->YAB1    --------->ZAT6 ----->DOF2 ----------->GT1              --------->ANAC58        <---------ATHB12 <---------DOF5.7(2)   aagagtagttgaaatagaaattaacctcgagtatcgaagaatcacgaaatcgagatctgtgttgccaaacatactcagcgaggataacgctacaaggcca  23704400                                                     --------->MYB52(1)                                                    --------->TOE1(2)                                      --------->ANAC58                                      --------->ANAC58                             ---------->DOF2                                      --------->ANAC46     ----------->GT1  ---------->DOF2                                   <-------TEIL    --------->MYB46(3)     --------->ANAC46                             <---------REM1(2)     <---------MYB52(2) ---------->DOF2            <---   aacaaacaatccatactcttccttcaaattctacacatacacacaaatcacaaacaaacgatggaaaaaacaaaacgcgaaagaagaaagctcgattaga  23704500                                                                  ----------->RAV1(1)                                                          --------->GLK1(1)                                                         <---------ARR11(1)                                                         --------->ARR14(2)                                                         --------->GLK1(2)                                                         <-----------ARR10                                                         ------->TEIL                                    <--------ATHB1       <---------ARR14(2)                                    --------->YAB1      <---------ARR14(1)                        <--                                   <---------ATHB51     <---------GLK1(2)                    <-------                                   <---------ATHB12     <---------CCA1(2)       <---------At4g35610                              --------->TOE2(3)  <---------HSFC1(2)         <---------ARR14(2)  <---- ------GLK1(1)       --------->At4g35610         --------->HSFC1(2)         --------->ARR14(2) <-----   aatcgccattgtttaccagtgagagcttaatacctcaataatagaaatgcaagtttccgaatctccagcaccatagaagttatgctgagaaatcgtcgtc  23704600                                          --------->YAB1          --------->ICU4        --------->ETT(2)          <---------YAB1        <---------ETT(2)                                         <---------ICU4 ----NtERF2         --------->DAG2     --------->GLK1(1)                                --------->ICU4 --DEAR3(1)<---------ICU4     <-----------HVH21 --------->YAB1                   <-------GAMYB -----DEAR3(1)     ---------->DOF2  ------->GAMYB<-----------TGA1               <---------MYB46(3) -NtERF2--------->YAB1        *TSS--------->At4g35610--------->ICU4     <-----------RAV1(1) <--------   gtcgtagtagtcatcatttcaaaaagtttctctgtcaacagaaatcgtaatcgtcatactgagaaatcgtcgtcttgttgggccgttgtaatttttacca  23704700                                                                   <---------MYB46(3)                                                               --------->TGA1a                                                               --------->O2               --------->ICU4                                                             <---------ALFIN1             <---------YAB1                           <---------TOE2(3)              ---------->ID1                --------->CCA1(2)                  <------MYB83                            --------->PCF2               <---------ARR14(2)                  <------MYB46(1)                      --------------->AtSPL8          --------->ARR14(2)                <--------P <---------TOE1(3)        <---------CCA1(1)          <---------TGA1a      ----------------->AGL1                        <---------RVE1(1)          <---------O2--------->ATHB12      ----------------->AGL2                       <---------ARR11(3)          ====================== ---GT1        <---------MYB52(1)                  --------->ARR11(3)        --------->CCA1(2) ------   ggcctaagcccattttcggtaggctaattagggttttgaaaaactgaagaagagatatttgtcccacatcggttagaagagacgggagggatatgattag  23704800                                                --------->ANAC58                                                --------->ANAC58                                                --------->ANAC46                                              <-----------RAV1(2)                                            <-----------HVH21                                          ===================================HOX2a_HOX2a                                        <---------ARR11(3)                     <---------YAB1                            --------->ICU4------>ZmHOX2a(2)                 --------->ICU4                      <------NtERF2--------->ICU4       ---------->DOF2   <---------MYB46(3)        ---------->DOF2<---------PCF2   --------->ARR11(3)                ----------->GT1     --------->YAB1 --------->ALFIN1  <---------YAB1--------->ANAC58     --------->ALFIN1 ==================bZIP_DOF <---------ATHB12------>ZmHOX2a(1)     --------->ICU4 --->MYB52(2)  ---------->DOF2  --------->AHL20(2)  --------->ANAC58  <------ZmHOX2a(1)   ttggctataaaaaagattaaaggtggggcaatgaataaatatgatccttcaggcaagttaaaggggaaatgaggagtggttattaaactcgcttaatgcg  23704900                                                                   ------>ZmHOX2a(1)                                                                   --------->LBD16                                                           ------>ZmHOX2a(2)                                                     ----------->RAV1(2)                                          ------>ZmHOX2a(1)===============HOX2a_HOX2a                                          ========================HOX2a_HOX2a                                 --------->ZAT18     --------->At4g35610                                 --------->ZAT14     <---------At4g35610    <------ZmHOX2a(2)             ---------->CDC5     <---------ZAT18--------->YAB1     ================HOX2a_HOX2a          xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <----------DOF2     ----------->RAV1(2)          -------   agaagagtgtttcgctcagcctgttacgactattgagcactctccttcttttatcatctgatccctctcctgaattcgatcacttgtttttaaaatcaaa  23705000            <----------DOF2            <---------DAG2               <---------YAB1                                           <--           --------------->AGL15      <---------AHL20(2)                                         ----        <-----------GT1           <------ZmHOX2a(1) --------->YAB1                             ------      <-----------GT1           <---------TOE2(3)  --------->AHL20(2)        <-----------GT1 <-------     <------------------------ANAC81  --------->AHL20(2)               ----------->GT1  <---------AHL20(2) --->DOF2---------->ID1       ---------->DOF2    --------->YAB1    ---------->DOF2     <---------AHL20(2)   gcgatttttttctccttttttagttttttttttaaaggattttatttttaaaaataaaaatcgacccataaaagtgtttaaactggttttttattttcat  23705100  Previous    Next  AGI:  At1g63855.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23262.1); contains domain SSF53335 (SSF53335); contains domain PTHR14614 (PTHR14614) Range:  from: 23703055    to: 23704630    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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