Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->AHL20(2)                                                       <---------AHL20(2)                  <---------HSFB2a(2)                                                    ------>MYB46(1)                  --------->AHL20(2)                                                    ------>MYB83                     <---------AHL20(2)                                                  <---------MYB59                   <---------WOX13(1)                                                  <---------MYB111(1)             --------->YAB1                                                 --------->ANAC55(1)              --------->ATHB12                                                 --------->ANAC55(2)              -------->HAHB4                                                 --------->ANAC58                 <---------ICU4                                                 --------->ANAC58                --------->ICU4                                                 <---------ANAC55(2)             <---------YAB1                     --------->DAG2         ----------->HVH21                  <---------ICU4                    ---------->DOF2       --------->At4g35610                 --------->ICU4 -----------GT1 --------->ANAC58      <---------ARR14(2)                    --------->YAB1 --------->HSFB2a(2) -----AHL20(2)  --------->ANAC58      --------->ARR14(2)                   <---------YAB1  <---------HSFC1(1) -GT1   --------->AHL20(2)---------->DOF2 <---------At4g35610   ---------->DOF2--------->YAB1     ---   tttttctaaattcaatagaagcaaaagtaaaagctctatggaactgctgacacctaattaaatactcaaagtttaatatgataatgattaattcgagaaa  23700200                                                           --------->YAB1                                         <-----------GT1--------->TOE2(3)                                     <---------ICU4     --------->YAB1                   <---------At4g35610        --------------------->WRI1  --------->ICU4     ----------->GT1                   --------->ZAT2        <----------DOF2          <---------AHL20(2)   <---------TOE2(3)            ---------->DOF2---     --------->GLK1(2)           --------->AHL20(2)  <---------DOF5.7(2)    <---------ICU4  ------>NtERF2 ------>MYB52(1)             --------->AHL20(2)    --------->DOF5.7(2)   --------->YAB1  --------->At4g35610   taacgagcatctttgttagtaccgaagctctataaataaatattatccacagcgataacgataatattccatcgataaaaatcacaaaagtagctgccaa  23700300                         --------->ARR11(3)                         <---------AHL20(1)        --------->AHL20(2)                      --------->AHL20(2)      <----------ID1            --------->ANAC58                  ----------->GT1                                ------>ZmHOX2a(1)            --------->ANAC58                ---------->DOF2                                ----------            --------->ANAC46             ----------->TBP                               --------->ZAT6            <---------ANAC55(2)          <---------AHL20(2)                          <-----------GT1  ----------->GT1     --------->YAB1   <---------------AGL15                        --------->YAB1 ------>AHL20(2)     <---------YAB1 <---------AHL20(2)    --------->ZAT18      <---------ZAT18      <   aaaaatgaaaaatcacgaaaactataatatatacacattttatataaaaagaaaaaaatatgcactaaattctaagcgttgtgcatttatcactcctggc  23700400                 --------->O2                 --------->ANAC46             --------->GLK1(2)                 <---------O2      --------->MYB46(3)                 --------->ANAC55(2)<---------ALFIN1         <---------ARR14(2)               --------->YAB1      <---------MYB55(2)        --------->ARR14(2)               <-------------DYT1 -------->P  --------->ARR11(3)                          --------->GLK1(2)              <---------ATHB12   ------->GAMYB<---------ARR11(3)             <---------MYB52(1)      ------>NtERF2             --------->MYB46(3)       <---------LBD16    --------->LBD16        <-  <---------ETT(2)      --------->YAB1       <---------GLK1(2)   XXXXXXXXXXXXXXXXXXXX>MIR869.1     <- <---------------------WRI1     <---------MYB111(2)  <---------GLK1(2)    <---------LBD16 ------->TEIL ->RAV1(2)------------>CBF      <---------MYB55(2) <---------TOE1(2)------------>CBF     --------->ARR14(2) -----------HVH21<---------ANAC55(2)------->GAMYB<---------LBD16 ----------->GT1         <---------ARR14(2)   actgtcgatgcctacaatcacgagactcataacaacaaccaccttcaaaatctcgggttctcgggtccggttcaattccggtttttgacccgaacctgtt  23700500                                                 =============================MYC_MYB                                 --------->TGA2(1)                                 <---------TGA2(1)                            <---------ATERF1(1)   -                          <---------ZAT14        --------->TGA1a        --------->ANAC46            =                   <---------YAB1--------->bZIP60(1)                 -------->P                    ==                --------->ARR14(2)               <---------TGA1a <-----------GT1                   <-           --------->MYB52(1)    <---------bZIP60(1)      --------->TOE2(3) --------->DEAR3(2)    <-- --------ANAC58 <---------MYB52(1)     <---------ALFIN1 ------->TEIL<-----------GT1               --- --------ANAC58 <---------ARR14(2)  <-----------GT1----------->RAV1(2)  ----------->HVH21     <------   tccgtcttcttctcaacggttatgcttctgaagtgatatcaccactctctctcgtctgaacctgaattttcaacccgacccgactccaacttcgttttcg  23700600                                                          --------->At5g28300                                                      ------------>MYB.PH3(1)                                                      --------->MYB52(1)                                                      ============================MYC_MYB                                                      ============================MYC_MYB                                                      ------------>AtMYB77                                                     <---------SPL7                                                   <------NtERF2                                                  <---------MYB46(3)                                                  ------>NtERF2             <---------ALFIN1                     --------->LBD16          ------>ZmHOX2a(2)                      <---------ANAC46         <------ZmHOX2a(2)                       <---------DEAR3(1)         --------->GLK1(1)                       --------->ALFIN1        <---------ARR11(3)                      --------->ATERF1(1)        --------->ARR11(3)                      <---------LBD16                    <----------DOF2        <-----------ARR10                       <------NtERF2             ----------->HVH21        --------->ARR14(3)                     ------>NtERF2            --------->TGA1a        --------->ARR14(2)                     <---------RRTF1(1)       <---------O2        <---------ARR14(2)                     <---------RAP2.3(1)      --------->O2       <------ZmHOX2a(1)                      <---------RAP2.3(2)       <---------ANAC46   ---------->DOF2                            <---------DEAR3(1)        <---------TGA1a ----->ZmHOX2a(2)                             <---------RRTF1(3)        --------->bZIP60(2) =============HOX2a_HOX2a                     <---------RAP2.3(3)      ------>NtERF2 =============HOX2a_HOX2a                    --------->ATERF1(1)       --------->LBD16 -----ZmHOX2a(2)                            ------>NtERF2----------->GT1======================bZIP_DOF -------ARR14(2)   --------->WRKY18(1)      <---------ATERF1(1)        <------NtERF2 ------>ARR14(2)  <-----------HVH21        --------->DEAR3(1)         --------->DEAR3(1) ---LBD16<---------GLK1(1)   --------->ZAT6----------->HVH21         <---------LBD16   gatccgaaaggatctccaccggtcatggattactctacggctacgacgacggcggggaacggttacagttcgccgcgtgactcttctttcccttcgagct  23700700                                                               <---------DEAR3(1)                                                             --------->LBD16                                                             ------>NtERF2                                                            <---------DEAR3(1)                                                           <---------LBD16                                                           --------->ATERF1(1)                                                           --------->SPL7                           --------->ARR14(2)             <---------ATERF1(1)                           <---------ARR14(2)             ------>NtERF2                           --------->ARR11(3)           --------->ATERF1(1)                           <---------ARR11(3)          ------>NtERF2                          <------MYB83                 <---------ATERF1(1)                          <------MYB46(1)             --------->ANAC46                      ------->GAMYB                   --------->DEAR3(1)           <------ZmHOX2a(2)                     --------->ANAC46                 <---------ALFIN1     --------->ANAC58                    --------->RAP2.6(3)             <---------ATERF1(1)    --------->ANAC46                   --------->MYB52(1)               ------>ZmHOX2a(1) --------->ANAC58                   <---------DOF5.7(2)             <---------ALFIN1   --------->ANAC46                <----------DOF2                  ------>ZmHOX2a(1)    --------->ANAC58    -----------                <---------DAG2       >>>>>>>>>>>>>>>>>LFY--------->DEAR3(1)--------->ANAC58   tcactaagttcaactccgctttaacggcaggtcttctaaatccaatgtctcctcctccgcctccggcgatgcacgacaagacacgatcaagtccgacgct  23700800                                                   <-------TEIL                                                  <------ZmHOX2a(2)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                <---------At4g35610                                    <---------HSFC1(2)                   --------->At4g35610          --------->At4g35610           <---------ANAC58         --------->HSFC1(2)                                              <      <---------ICU4                <---------HSFB2a(1)     --------->ALFIN1                        <      --------->ATHB12              --------->HSFB2a(1)--------->MYB52(1)      <------NtERF2        -      -------->HAHB4      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->At4g35610                 <-     --------->ICU4<---------At4g35610      <-----------HVH21<---------ZAT18 <---------DEAR3(1)  ---- >HVH21    <---------ANAC58       ---------->DOF2--------->AGP1<---------At4g35610               <---   gttcgaaatgatggctagtgaagctgataccatagggaaagttccagttcagatccataacggtgtgcttccatctccgtcgtcgtcttcatcgtcttct  23700900             <---------DEAR3(1)            --------->At4g35610            <---------At4g35610        <---------ATERF1(1)       <---------ARR14(2)       --------->ARR14(2)      --------->At4g35610      <---------At4g35610      --------->ATERF1(1)      <------NtERF2     ------>NtERF2     <---------MYB46(3)     <---------DEAR3(2)     <---------RAP2.3(1)     <---------ERF1     <---------ATERF1(1)    --------->ATERF1(2)    --------->DEAR3(1)    <---------DEAR3(1)    <---------ANAC46    <---------RAP2.6(2)   <------NtERF2                                                                             ------>ZmHOX2a(2)   --------->ATERF1(1)                                                                      ---------   <---------At4g35610                                                                      ---------   ------>NtERF2                                                                           --------->ARR14(2)  ------>NtERF2                                                                            <---------ARR14(2)  <---------RAP2.3(1)                                                                      <---------ARR11(1)  <---------RRTF1(1)                                                                       <---------  <---------RAP2.6(1)                                                                      <---------ARR11(3)  <---------ATERF1(1)                                                                      --------->ARR11(3) <---------DEAR3(1)                                                                       <---------ARR14(1) <---------RRTF1(2)                                          --------->ANAC58             <---------CCA1(2) <---------RAP2.3(2)                                         --------->ANAC58          <---------LBD16 ---------At4g35610                                   <-----------RAV1(2)           <---------ARR14(2) ---------LBD16<------NtERF2------->TEIL           <---------ZAT2    <---------ANAC58<---------GLK1(1) -------->At4g35610   <----------ID1               --------->At4g35610              --------->ARR14(2) ----------RAV1(1)   --------->SPL7                <---------At4g35610         --------->MYB52(1) ------->RAV1(2)    <------ZmHOX2a(1)    ----------->GT1 <------ZmHOX2a(1)  --------->AtLEC2<------ZmHOX2a(2) ------At4g35610<---------ANAC46    --------->YAB1 --------->ZAT2    <---------ANAC58--------->GLK1(1)   tctgcggcggctacggctgcgaggacgacgaatgtgaatcatcttgttatttcagctcaggataagcaagcgcttgcgatgcaacggatttcggatcttc  23701000                        --------->ZAT14                  --------->GLK1(2)              --------->LBD16             --------->LBD16                        --------->ZAT2             <---------LBD16                        --------->At4g35610          --------->ATERF1(1)                       <---------At4g35610         --------->GLK1(1)          <---------ARR14(2)         <---------GLK1(1)          --------->ARR14(2) <---------MYB46(3)     <---------ZAT14             <---------ZAT2 >GLK1(1)------>NtERF2--------->At4g35610       ----------->HVH21   ---------->DOF2        ------->MYC3 >HSFB2a(1) <---------LBD16 <---------ATHB12<---------ZAT14    --------->At4g35610         <-------MYC3 --ARR10--------->ARR14(2)  ----------->HVH21 <---------ANAC46 <---------At4g35610   <-----------GT1   tggtgattcggagccccgggaatcagttcaatgacccgaattcgagtgatgtgaagctgactctgagctctaaagatgggattagtatcaccatgtgtgt  23701100  Previous    Next  AGI:  At1g63850.1    Description:  PRLI-interacting factor-related. similar to PRLI-interacting factor-related [Arabidopsis thaliana] (TAIR:AT5G60050.1); similar to Os04g0579700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053645.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65929.1); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14275.1); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 23700625    to: 23702371    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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