Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->TOE1(2)                                                                                 --------->TOE2(3)                                                                       <---------ANAC58                                                                       <---------ANAC55(1)                                           --------->YAB1              --------->ANAC55(2)                            --------->GLK1(2)            <---------ANAC46 ------->TEIL---------->DOF2                           --------->GLK1(1)  ------>ZmHOX2a(2)        <---------ANAC55(2)               <-----------RAV1(2)        <---------ATHB12   <---------At4g35610 --------->TOE2(2) ----------->GT1<---------TOE1(3) <--------P<---------ARR11(3)         <---------ANAC58 -DEAR3(2)    <-------TEIL <---------GLK1(1)--------->ARR11(3)        <---------TOE2(3)  --------->YAB1   atgaggttgaaaccggttcaggttctaagaaatctggtagaccaatgatcttgaacattgtggagatgagtttacgtatcaaacctaagaaagataacaa  23694100                                        --------->LBD16                                      <---------LBD16                                     --------->MYB52(1)                                --------->ARR11(3)                                <---------ARR14(2)                                <---------ARR11(3)                                --------->KAN4(2)                                --------->ARR14(2)                               <---------HSFB2a(1)                               <---------KAN4(1)                               <----------TaMYB80                               --------->HSFB2a(1)                               --------->KAN4(1)                               <---------GLK1(1)                               --------->GLK1(1)                       --------->At4g35610       <---------GLK1(2)      ---------->TaMYB80                   ----------->GT1       --------->ARR11(3)     <---------KAN4(2)              <---------MYB52(1)       <---------ARR11(3)    <---------GLK1(2)              <-----------HVH21  <----------ID1   ---------->DOF2 <---------REM1(1)<---------ALFIN1        <-------GAMYB  --------->YAB1   gtagaaaaagatttttgggagaagtagctcagaatatcccaccggaaaacccattgcctcgccgttagagagataaatgataagacaagagacagagaga  23694200                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)<-------                                 --------->ALFIN1                  <-----------GT1           --------                              --------->DAG2                    --------->YAB1               --------                              <---------TOE2(3)                 <---------ICU4     <---------------AtSPL8                          --------->YAB1                       --------->ICU4      --------------->AtSPL8                         <---------YAB1                     <------ZmHOX2a(1)<---------TOE2(3)<------                         --------->ICU4            --------->AHL20(2)  --------->AHL20(2)    <-------                      <---------YAB1               <---------AHL20(2)--------->TOE2(3)   --------->ICU4   gagagagagagagagttttggattgtgatgataaggtggagaatgggtgagatttatatataggaataataacttaattaatgtattagtactaatttaa  23694300                                                 <---------HSFC1(1)                                                 >>>>>>>ZML2                                         --------->YAB1                                         -------->HAHB4                                         <--------ATHB1                                         <---------ICU4                                         --------->ATHB51          <-------TEIL                  <---------YAB1    <---------ATHB12                    <---------AHL20(2)  --------->WOX13(1)                    <---------ATHB51   <---------ARR11(3) <---------WRKY38(1)                    --------->ICU4     --------->ARR11(3)             --------->HSFB2a(2) --AHL20(2)                           --------->YAB1      <------ZmHOX2a(1)               <---------HSFB2a(2) ->AHL20(2)                         <---------MYB52(1)  <---------TOE2(3)           <---------YAB1 ->AHL20(1)                        --------->TOE2(3) <---------REM1(1)           --------->ICU4    <- ---AHL20(2)                      ----------->GT1<---------HSFB2a(2)       --------->ALFIN1   ------- --AHL20(1) <----------DOF2  <---------YAB1      --------->HSFB2a(2)  <------ZmHOX2a(1)   <---------HSFC1(1)   tagtcaatgaggtgctttgttttttggtattttgattcgttaataattgttctagatgaaggatattagccaggaatgtggtgatgatgtttctagaggt  23694400                                                                      *TSS                                     <-----------GT1              --------->AHL20(2)                             <----------DOF2          --------->MYB52(1)          --------->YAB1  ---------->ID1         <---------AHL20(2)<---------ICU4           <--------   ----------->GT1       <---------WRKY18(1)     --------->AHL20(2)--------->AHL20(2)      --------->AHL20(2) --------YAB1           ----------->HVH21   --------->AHL20(2)    <---------AHL20(2) <-----------GT1 ---->GT1<---------AHL20(2) <---------DAG2  <---------AHL20(2)--------->AHL20(2) ------->TEIL--------   tatactagtaaataatagaagactacttgaccttttttttttctatataatttaaataagggttttaaataatttcttatatgtattttactatataata  23694500                                                                   <----------DOF2                                                                <-----------GT1                                                               <-----------GT1     --------->MYB52(2)                                      --------->YAB1   <---------MYB52(1)                 --------->ZAT6     --------->AHL20(2)                   ------- ----------->GT1                  --------->AHL20(2)     <---------AHL20(2)         <---------WOX13(1) -AHL20(2)     <-----------GT1    <---------AHL20(2)    --------->AHL20(2)        --------->ATHB12  - ->YAB1<----------DOF2 --------->AHL20(2)            <---------AHL20(2) <-----------GT1    <---------bZIP60(2)   aactcgttactttcaaatttccattttaaatcagatttaaacactaaatttctgtttatttaattttaactttcttacaattcttgatttatgaagtggt  23694600                                                                       <---------ZAT14                                                              <---------YAB1                                                        <---------CCA1(1)                                                        <---------RVE1(1)                                                       --------->AHL20(1)                      ------                                                       <---------AHL20(1)                   <--------                                              --------->ICU4<-----------GT1       --------->AHL20(2)                                       <---------ICU4 --------->YAB1   <---------ARR14(2)   ---------              ---------->DOF2       --------->ANAC55(2)--------->ARR11(3)      <---------YAB1 <------ ---->GT1 <------ZmHOX2a(1)         <---------ANAC55(2)<---------ARR11(3)     <---------AHL20(1) --------->DOF2                    <-------TEIL    ---------->DOF2  <---------ANAC46  <-----------GT1   ataaaagttttaggagaaaagacatgtatacatgaaatacataatgacataatcaaagatatttacaattgagtatacattatttttaatacggtatacg  23694700       ----------->GT1     --------->ANAC46 --->ANAC46                --------->ANAC58                                      <---------TOE1(2) -ARR14(2)       <---------At4g35610             <---------ARR11(3)              <---------TOE2(2)  - >ARR14(2)      --------------->AGL15  --------->ANAC46<---------YAB1          --------->TOE1(2) ---- ---LBD16 ------->TEIL     --------->ANAC58  --------->YAB1                    --------->TOE2(2)-----   gagacagaaatgtaacttctgcttatagcacccaagaatacacataatcaacatattacaaatgaaaaaaaaaaactcatacctaggttaacccatgagg  23694800                   <---------HSFB2a(2)     --------->ARR11(3)     <---------AHL20(1)     --------->AHL20(1)     <---------ARR11(3)     --------->AHL20(2)     <---------AHL20(2)             <---------AHL20(2)    --------->AHL20(2)             <---------AHL20(2)                         --------->AHL20(2) -------->AHL20(2) --------->HSFB2a(2)           <----------DOF2 <---------TOE1(2) ------->GT1  <----------DOF2      --------->AHL20(2)          --------->TOE1(2)  --------->AHL20(2) ------>GT1<-----------GT1       --------->TOE2(3)  <---------MYB46(3)       --------->AHL20(2)<-----   gtttaaatatattaaacttttctaaaaatcccaaatattaattagtctatactttggttcaaaatcgttcgattacaaaataaaaaaaatcgtgttttta  23694900                  -------->ATHB1                  <---------ICU4                  --------->ATHB51                 --------->AHL20(1)                 --------->ICU4                 <---------ATHB51                 <---------YAB1                      <-----------------AGL3        <---------MYB46(3)                         --------->ARR14(2)       <---------TOE1(2)    <---------TOE2(3)      <---------ARR14(2)                               <    --------->ATHB12     <---------WOX13(1)        --------->MYB52(1)                          ------  ------->TEIL   <---------AHL20(2)             <---------ANAC58                        --------->ANAC58 <---------CCA1(2)--------->ATHB12              <---------ANAC58       ---------->DOF2  --------->ANAC46 ----AHL20(2)  <---------ICU4            ------->TEIL<-----------------AGL2             --------->ANAC58   tttgaatctttggttcaaaattattggattgatgttttcaatgtattttagcgtaactgaatttggattttgacaaagtcactacaatacacgacttatg  23695000  Previous    Next  AGI:  At1g63840.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G41400.1); similar to At1g63840-like protein [Arabidopsis lyrata] (GB:AAZ73388.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23693360    to: 23694470    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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