Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <----------DOF2 -------->HVH21 -->ZmHOX2a(2)                                                                        ----------->GT1 -----At4g35610                                                                   <---------AHL20(1) --ZmHOX2a(2)                                                                     --------->AHL20(1) ---->At4g35610                                                            <------NtERF2 --->GLK1(2)                            --------->At5g28300             --------->RAP2.6(3) ------ARR10                           ----------->GT1       <---------AHL20(2)   --------->ARR11(3) --->ARR14(2)                         <---------ANAC46      <---------AHL20(1)  --------->AHL20(1) ----ARR14(2)      <-----------GT1 ----------->HVH21        <---------AHL20(2)  <---------ARR11(3) -- ->TEIL   ----------->GT1          ----------->TGA1         --------->AHL20(2)  <---------AHL20(1) -- ----AGP1--------->DAG2        <---------WOX13(1)          --------->ICU4--------->ETT(1)         --- -GT1   ---------->DOF2    --------->At5g28300        ----------->GT1 <-----------RAV1(1)     <------   ctgactttgaaaaagtaaaatttacatgcggtaattggtgacggtaaaaacttattttgtaattttttttttttgtcggcaaaatattttgtaatattac  23688500          <---------AHL20(1)                                                             <---------HSFB2a(2)          --------->AHL20(2)                                         --------->LBD16     <---------HSFC1(1) ---->MYB83                                                    <---------AHL20(2)        --------->HSFB2a(2) ---->MYB46(1)                                                 ---------->DOF2 ----------->GT1 -------->RAV1(1)                      <----------DOF2        --------->AHL20(2)         --------->HSFC1(1) -----GT1 <---------AHL20(2) ----------->GT1              <---------YAB1   <------ZmHOX2a(1)   ------   caacatttgcaaaaaatttagaatgcagagatagaaaaactctttcttcgacttcaaactctcattaaatccgtagaggaatagttattttctagaaacc  23688600                                                                                                  ---                                                                                                  ---                                                                 <----------DOF2              -------                                                               --------->ZAT18         <---------ARR11(3)             ------>MYB46(1)                                   <---------ZAT18   <---------YAB1<-----           <---------MYB59      <---------ANAC58        <---------AHL20(2)     <---------AHL20(2) <--           <---------MYB46(2)   <---------ANAC58 --------->GLK1(2)            <---------YAB1  <------        <-----------GT1   <---------YAB1         <---------ARR11(3)        --------->ICU4------>ZmHOX2a(2) --->MYB46(3)------>MYB83 <---------WOX13(1)     --------->ARR11(3)  <---------TOE2(3) --------->ARR11(3)   atcgaaattgttaccaaaccctcatttgattaatgcgttcaacattttgaaaatctttttatttgtgcattaatgtgatttttatttttgatcttactaa  23688700                             ------>NtERF2                             --------->LBD16              --------->AHL20(2)              <---------AHL20(1)                                                     <------MYB46(1)        <---------AHL20(2)  <---------LBD16                            --------->ARR14(2)       --------->AHL20(2)   <---------RAP2.6(2)                        --------->ARR11(3)   ---------    <---------AHL20(2)     --------->RAP2.6(3)             --------->YAB1        <-----------RAV1(1)  --------->AHL20(2)       <---------LBD16                <---------ATHB12  <---------AHL20(1)  <---------AHL20(2)  --------->AHL20(2)                 ------>MYB83  <---------ARR11(3)  ------>NtERF2 ------>AHL20(2)      <---------AHL20(2)                 ------>MYB46(1)    --------->AHL20(2)     <- ------>YAB1  <---------AHL20(2)                        --------->WOX13(1)  <---------AHL20(2)    --- -------->AGL15    <---------AHL20(2)                 --------->MYB46(3)   --------->AHL20(2)    <--- ----ICU4     --------->AHL20(1)                    <-----------GT1    <---------ARR14(2) <---------ETT(1) -------AHL20(2)  --------->AHL20(2)              <---------AHL20(2)  <------ZmHOX2a(1)--------->PCF5 ---------AGL15  <---------YAB1           <---------ARR11(3)       --------->LBD16   <------MYB83----   ttatataaatttaaaatttattatataattccggcattccccaaggtcatattttaaccaatcagaacccgaggatattaaatttgttggtcccgacaat  23688800           <---------ANAC46     --------->DAG2                                                                --------->ARR14(2)    ---------->DOF2                                                                <---------ARR11(3) --->CBF --------->ALFIN1                                                          --------->ARR11(3) --------TOE2(3)                --------->YAB1                                     <-----------ARR10 ------->DOF2 <---------PCF2   <---------AHL20(2)                --------->ATHB12 --------->CCA1(1) ------AHL20(2)            ------>ZmHOX2a(1)                  *TSS                --------->RVE1(1) ----->AHL20(2)--------->WRKY18(1)                        --------->ANAC46    --------->AHL20(2)-----   taaagaaaaagttgtgggtcaaactggtcctaaataatagtcaaacttctcattttttctaagaaactgatttgataaaaaaaaatatcttcgttgaagt  23688900                                                               <---------YAB1                                                             <-------TEIL                       <----                                <---------TOE1(3)          <---------GLK1(2)                   <-----           <---------HSFB2a(1)  <---------TOE2(3)   <------ZmHOX2a(2)                     --------->ATHB12           --------->HSFB2a(1)---------->DOF2      --------->ARR14(2)                <---------YAB1           --------->HSFC1(2)<---------AHL20(2)    <---------ARR14(2)            <---------GLK1(2)           <---------HSFC1(2)--------->AHL20(2)    --------->ARR11(3)<---------ARR11(3)  <---------AHL20(2)     <---------ANAC46     --------->WOX13(1)       <---------ARR11(3)--------->ARR11(3)  --------->AHL20(2)  ----------->HVH21   --------->YAB1           <---------At4g35610   <---------GLK1(2)  <---------WOX13(1)  ----------->TGA1 <----------DOF2         ----------->HVH21<---------ARR11(3)<------------MYB.PH3(1) ---->ALFIN1     <---------At4g35610   <---------ANAC46 <-----------RAV1(2) <-----------GT1    <-----   gagggtgacgagaagtttctgctttcatcaattaaaggtttacgcgtgaagcagatcatcaggttcttatagattttgtaaccgattttgatttattgct  23689000                                                                            <------NtERF2                                                                           ------>NtERF2                                                                           <---------ATERF1(1)                                                                           <-----------HVH21                                                                          --------->DEAR3(1)                                                                          <---------ANAC46                                                                          <---------DEAR3(1)                                                                          <---------ANAC58                                                                          <---------bZIP60(1)                                                                          <---------O2                                                                          --------->O2                                                                          --------->bZIP60(1)                                                                          <---------ANAC58                                                                         --------->RAP2.3(1)                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                         --------->RRTF1(1)                                                                        <---------RRTF1(1)                                                                        <---------RAP2.3(1)                                                                        <---------ERF1                                                                        <---------ORA47(2)                                                                        <---------RAP2.6(1)                                                                        ------>NtERF2                                                                       <---------DEAR3(1)                                                                       <---------ANAC46                                                                       <---------RAP2.6(2)                                                                       <---------RAP2.3(2)                                 --------->ARR14(2)                    <---------RRTF1(3)       --------->ZAT14           <---------ARR14(2)                    <---------DREB2C(2)       <---------ZAT14           ------->TEIL                          <---------RAP2.3(3)  =============================================================MADS_MADS<---------ATERF1(1)  --------------->AGL15          --------->GLK1(2)             --------->ANAC58  --------->ANAC58 ------DOF2           <---------TOE1(3)        --------------->AGL15   <---------RRTF1(2) ----ANAC58           <---------TOE2(3)        <----------DOF2 --------->ANAC58  --------->ANAC58 ----ANAC58       <----------DOF2<-----------ARR10           ---------->DOF2--------->ATERF1(1)   tttgctctgtatagtcactgatttagggtttttcgaatctgaacttcttcttttttgagtttccaaagcaatggcggcgtcgcaagataagttggataag  23689100                                                            ------>NtERF2                                                           --------->RAP2.3(2)                                                           ----------->HVH21                                                           --------->DEAR3(1)                                                           --------->RRTF1(3)                                                           --------->DEAR4(1)                                                           --------->At1g77200                                                           --------->RRTF1(2)                                                           --------->DREB2C(2)                                                           --------->RAP2.3(3)                                                           --------->RAP2.6(2)                                                           <---------ETT(1)                                                           --------->ANAC46                                                          --------->RAP2.3(1)                                                          --------->ERF1                                                          --------->ORA47(2)                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                         --------->ABI4(1)                                                       --------->ATERF1(1)                                                       --------->DEAR3(2)                                                      <---------At5g28300                                                      <---------ATERF1(1)                                                     <---------ALFIN1                                                   <-----------TGA1                                                   <-----------HVH21                                                  --------->DEAR3(1)                                                  --------->bZIP60(2)                                                 <------NtERF2  --------->ANAC58                        <---------AHL20(2)      <---------ATERF1(1)                   --------->LBD16            --------->ZAT18 <---------ALFIN1                 <---------LBD16       ------>ZmHOX2a(2)--------->DEAR3(1)           --------->ICU4    <---------ZAT18  <---------ABI4(2) --------->ANAC58         <----------- ------->TEIL   --------->MYB52(1)    <------ZmHOX2a(2)--------->MYB46(3)            <----------DOF2   atgaaacttaggcaagattaccggaatttatggcactccgatctcatgggcaccgtcaccgccgacactccctgtaaatctcagtctcttttgtttttgt  23689200                                                                  ------->TEIL                                                             <---------ICU4                                                            --------->ICU4                        <--                                                        --------->LBD16                      <-------                                                       <---------HSFB2a(2)                   <-------                                                       --------->HSFB2a(2)                   <-------                                                      <---------ANAC46              --------->At4g35610                                                      <---------LBD16   <----------DOF2  ------->TEIL                                   <---------ARR14(2)<---------LBD16    <---------DAG2  --------->REM1(1) -------------ANAC81    <-----------GT1        ---------->ID1--------->YAB1       <---------WOX13(1)   ttttatgtctcttaacttcattgttttttctattgaagaactgatttttgtttttttcgggaattatgaacttactttttgcagattgctgcatctcgtg  23689300                                            ------->TEIL                                       <-------GAMYB                                      <---------ANAC46                                      <---------ANAC58      --------->MYB52(2)        <---------TOE1(3)    <--------P            <---------ANAC58  <---------ARR14(2)            <---------WOX13(1) -------DEAR4(1)          <---------ANAC58  --------->ARR14(2)           <---------AtLEC2 --ANAC46          ------>ZmHOX2a(2)  <---------ANAC58                   <---------ANAC58 --ANAC58   <---------MYB46(3)  <---------TOE2(3)                        <---------ANAC58 --ANAC58<---------MYB46(3)<----------DOF2 <---------CCA1(2)       <---------YAB1                 ---   tctgtggtaagttgttgttgatctatttgcttttagggtttcgttgtatctgagattgtttttaggcttatttttgcttgattcaattttgagtctgtat  23689400  Previous    Next  AGI:  At1g63830.1    Description:  proline-rich family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41390.1); similar to Os03g0123600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048806.1); similar to unknown [Populus trichocarpa] (GB:ABK94210.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) Range:  from: 23688862    to: 23690985    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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