Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                            <--------                                                                                         <------ZmHOX2a(1)                                                                                         ============                           <---------DEAR3(1)                                            ============                          <------NtERF2                        <---------ARR11(3)      <---------TOE2(3)                   <---------YAB1                              --------->ARR11(3)      <---------TOE1(3)              --------->CCA1(2)                               --------->YAB1         --------->CCA1(2)             <---------ARR14(2)                              <---------YAB1       <---------TOE2(3)             --------->ARR14(2)                            --------->YAB1    <------ZmHOX2a(1)            <------ZmHOX2a(1)<------NtERF2         --------->MYB52(1)        ======================== -----ZmHOX2a(1)<---------YAB1            ---------->DOF2<---------WOX13(1)  ========================   aggagaagaagagaggatatgatgagtcgtcggagtaaaactttcaaagaaactaagagattgatgatcatccattgaaggattgagataaggattgttg  23687600        <-----------RAV1(1)       ==============================HOX2a_HOX2a       ------>ZmHOX2a(2)      ===============================HOX2a_HOX2a      <------ZmHOX2a(2)     --------->AGP1     <---------ARR11(3)     <---------ARR14(2)     --------->ARR11(3)     --------->ARR14(2)<-----------HVH21                                                           <-    <---------GLK1(1) <-----------RAV1(1)           <-----------RAV1(1)                           --- ---RAV1(1)           <---------ANAC46            --------->ZAT14                                 <-- -MYB46(3) <---------MYB46(3) ======================HOX2a_HOX2a                               ------- ============HOX2a_HOX2a      <------ZmHOX2a(1)   <---------ZAT14                          --------->CCA1(2) =============HOX2a_HOX2a  <------NtERF2     ============================HOX2a_HOX2a      --------->ARR11(3) =============HOX2a_HOX2a--------->ETT(1)    <------ZmHOX2a(2)    <------ZmHOX2a(1)       <---------ARR11(3) ============HOX2a_HOX2a <---------ANAC46  <------ZmHOX2a(1)    <---------TOE2(3)     ---------->DOF2   cagtagagatctgttgttgttgttgtgtcggaggaaaacatatcaggatcagtactgtggcagattgaggaagaagatgaagacccatcaaagatataaa  23687700                                                      >>>>>>>>>TBF1              <----------DOF2                    <---------ATHB12    <---------ARR14(2)                       <---------------AGL15    --------->GLK1(2)                     --------->GLK1(2)    --------->ARR14(2)                   --------->ARR14(2) -----ZmHOX2a(2)                         <---------GLK1(2)                  --------->GLK1(2) ------>ARR11(3)       --------->MYB59   <---------ARR14(2)                 ------->TEIL -------ARR11(3)  <---------AHL20(2)     <---------ARR11(3)            ----------->GT1<-------GAMYB --->DOF2     <---------DAG2 --------->ZAT6  <---------YAB1   ----------->GT1  <----------DOF2     <-   gatcagaatccatgccctttttattttggtaacacaaactcaagattctcaatgaagaagaagagagataaacaagtgaatcttttggggttatgttctg  23687800                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                   ==                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                         --------->O2  <---------YAB1              <-                                                         <---------TGA1a <----------DOF2         ----                                                         <---------O2 --------->ARR11(3)         ----                                        --------->At5g28300           <---------ARR11(3)   --------->MYB52(1)                                        <-----------HVH21--------->TGA1a------>ZmHOX2a(2) --------->AtMYB61      <---------At5g28300           --------->MYB52(1)   ===========================bZIP_DOF    <----     <-----------GT1                ------------>MYB.PH3(1)----------->HVH21             --------->MYB46(3) ---------DOF2                      ===============================MYC_MYB   ---------->ID1----------   tctttttttactgtctctgcaattgaattgagcaaatgaaacggttacagagaaaacacaagtgacactcgtgatctttgtttttttgaaaaccaccaga  23687900       ----------->GT1 -------------->AGL15 ---------------AGL15 --------------->AGL2 =====================================================================MADS_MADS ----------------AGL2 --------------->AGL3 --------------->AG ----------------AGL3 --------------->AGL1                                                    <------------------------ANAC81 ----------------AGL1                                       --------->DAG2 ----------------AG                      --------------->AtSPL8       <---------AHL20(2) ----->ARR14(2)                   ----------->GT1          ---------->DOF2 ----->GLK1(2)                   <---------TOE2(3)    --------------->AGL15 -----GLK1(2)                --------->TOE2(3)        <---------------AGL15                    <----- ->RAV1(1)  ---------->DOF2<-----------GT1      <----------DOF2----------->GT1          <----------DOF2   atccaaaattggcaaaaagaaaactgttttttcttaatgtaaatttggaccttttacccaaaaaagtgtgatttttttttttgtttctctctttttcttc  23688000                                                            --------->AHL20(2)                                                  <---------ZAT18                  --------->ANAC58                --------->ZAT18                  --------->ANAC46            <---------MYB46(3)                <------MYB46(1)          --------->HSFB2a(2)  <-------TEIL   <---------AtMYB61                 ----------->GT1          <---------HSFB2a(2) *TSS            <-----------RAV1(1) <---------At4g35610 --------->ARR11(3)    ----------->HVH21  <------MYB46(1)   <-----------TBP     <------MYB83 ----REM1(2)      --------->ANAC58        <------MYB83  <---------YAB1------------>CBF        -------   acagttcttgtttcagaaccaaggcatgacaggtccagtttatttggtctggtgggctatgtttatatagcagacaattagtgggtttaacaaatgtacc  23688100                                                                        --------->AHL20(1)                                                                        <---------AHL20(1)                                                                        <---------AHL20(2)                                                                     <---------AHL20(2)                    ------->TEIL                                     --------->AHL20(1)                 <---------YAB1      --------->AHL20(2)              --------->AHL20(2)     <---------AHL20(1)              <---------AHL20(2)             --------->AHL20(2)     --------->AHL20(2)             --------->AHL20(2)              <---------AHL20(2)     <---------AHL20(2) <-----------GT1   <-----------GT1     ----------->GT1         <-----------GT1 >TEIL     <---------TOE2(3)    <-------TEIL              <---------YAB1--------->AHL20(2)   ctcgtattttatttatgttatgaatttctccatatacatttaatttacacatttttgtctatgtttgtaaataatttattgtagtaattttctctctggt  23688200                                                  ---------->DOF2                                                  --------->MYB52(1)                                               --------->At4g35610                                     <---------ANAC58          ---------->DOF2            <---------ANAC58       --------->TOE2(3) --------->STY1(1)    --------->ANAC58     --------->ARR11(3)  <---------STY1(1)    --------->ANAC58     <---------ARR11(3)------>MYB83  <---------AtLEC2                  <----------DOF2    <---------CCA1(2)  ------>MYB46(1) ----------->HVH21  --------->ICU4    <-----------GT1     -----   gtttttatatcttaaagtctaaacccactagggtattttgcatgacataagctaaaggtaagaattgacaaaccttttatactcatttgctattgaaata  23688300                                                                                                  ---                                                                                                 ----                                                                                                <----                                                 <----------DOF2                                -----                                             <---------ZAT18                                    <----                                             --------->ZAT14                                   <-----                                       <<<<<<<<<<<<<<<<<LFY                               <----------                                      --------->ETT(2)                         <------MYB83    <-----                        <---------ANAC46     <---------ZAT14                   <------MYB46(1) ------               <---------ANAC58       --------->ANAC46         ----------->GT1 <---------ANAC58------               <---------ANAC46       --------->bZIP60(1)      <----------ID1  <---------ANAC58<-----               <---------ANAC58     >>>>>>>>>WRKY18          --------->DAG2 >>>>>>>>>CBP60g    ------ ------>GT1  <---------At5g28300   --------->WRKY12         ---------->DOF2 >>>>>>>>>SARD1--------->MYB52(1)   gaaacaaatcgaatttagcgtgtgattcgtagagccattgacgacagtggacttttgtttgaaaaaggagaaattgaaatttggtgtcaatgtaacggat  23688400  <----------DOF2 -------->HVH21 -->ZmHOX2a(2)                                                                        ----------->GT1 -----At4g35610                                                                   --------->AHL20(1) ---->At4g35610                                                                   <---------AHL20(1) --ZmHOX2a(2)                                                              <------NtERF2 ----ARR14(2)                           --------->At5g28300             --------->RAP2.6(3) -GT1     ----------->GT1              ----------->GT1       <---------AHL20(2)   --------->ARR11(3) ----AGP1--------->DAG2               <---------ANAC46      <---------AHL20(1)  <---------AHL20(1) ->TEIL ---------->DOF2            ----------->TGA1         --------->AHL20(2)  --------->AHL20(1) -- --->ARR14(2)                  <---------WOX13(1)           <---------AHL20(2)  <---------ARR11(3) -- ------ARR10               --------->At5g28300             --------->ICU4--------->ETT(1)         --- --->GLK1(2)       <-----------GT1 ----------->HVH21  ----------->GT1 <-----------RAV1(1)     <------   ctgactttgaaaaagtaaaatttacatgcggtaattggtgacggtaaaaacttattttgtaattttttttttttgtcggcaaaatattttgtaatattac  23688500  Previous    Next  AGI:  At1g63820.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65933.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 23686085    to: 23688030    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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