Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------>NtERF2                                              <---------RAP2.6(2)                                             --------->RAP2.6(3)                                            --------->MYB52(1)                                           ----------->HVH21                                       <-                                           ----------->TGA1                                   ------>ZmHOX2a(1)        <---------ANAC58                 --------->YAB1                                       -------        <---------ANAC58                <---------ATHB12            ----------->RAV1(2)<---------ATHB12      <---------YAB1      <----------DOF2<---------ICU4--------->ARR14(2)          ==================HOX2a_HOX2a --MYB52(1)         --------->ALFIN1    --------->MYB46(3)   ------->TEIL          ------>ZmHOX2a(2)   tatcaggtatgcttgtagcaccatggggctttggaagtggcaaccatgacggcttcaaatttgcatctaaacctggtctctgtgatccattcattcctga  23632400                                                        <----------DOF2                                                      <------ZmHOX2a(2)                                                     <---------ARR14(2)                                                     --------->ARR14(3)                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     <---------ARR14(3)                                                     --------->ARR14(2)                                               <-----------RAV1(2)                                              --------->At4g35610                                           ---------->DOF2                                       <---------------AtSPL3                                   ==========================HOX2a_HOX2a                                   <------ZmHOX2a(1)--------->GLK1(1)                             <------ZmHOX2a(1)<---------At4g35610                             =================================HOX2a_HOX2a                             ================================HOX2a_HOX2a           <---------ANAC55(2) <---------TOE1(1)    <---------GLK1(1)                          ======      ----------->GT1       <----------ID1 <-------TEIL------>ZmHOX2a(2)    <---------ANAC46   ====== --------ICU4    <------ZmHOX2a(1) ===========================HOX2a_HOX2a   ----------->GT1    <----- -->LBD16  --------->ANAC55(2) <---------TOE2(1)  <------ZmHOX2a(1)   ----------->HVH21 --------->REM1(2)   atcagtactggttacatgaggacggacaataggacgaggaagaggtacagcaggagatctttctgcaaaactctgacagcgtgaaacccgagtagaagga  23632500      =================================HOX2a_HOX2a      ------>ZmHOX2a(2)     ==================================HOX2a_HOX2a     <------ZmHOX2a(2)    <---------ARR11(3)    --------->ARR11(3)                                     <------NtERF2    --------->ARR14(2)                                   <---------DEAR3(1)                        <-    --------->ARR14(3)                                <---------O2                          ---------    <---------ARR14(3)                                --------->TGA1a                       ------>MYB46(1)    --------->AGP1                                    --------->bZIP60(1)                   ------>MYB83    <---------ARR14(2)             <-----------HVH21  --------->O2                --------->ZAT6   --   <---------GLK1(1)              ==============================bZIP_DOF      =======================   --------->GLK1(1)              <----------DOF2     <---------TGA1a   <---------ANAC58    <--------  ----------->ARR10   <---------ARR11(3)              <---------bZIP60(1)     ------>ZmHOX2a(2)  <--- ===========HOX2a_HOX2a--------->CCA1(2)              --------->ANAC55(2)   --------->ARR11(3)  ----- ============HOX2a_HOX2a        ------>ZmHOX2a(1)     <---------ANAC55(2)   <---------ARR11(3) ------ -ZmHOX2a(1)          --------->ARR11(3)              --------->ANAC46  <---------ANAC58  --------->AtMYB61   gagggagatcttgatggtaatcgagatatagctcctctttcagacacaatctcatcacgtcgtcgtcttgattttcttgatcttccactagacctatcct  23632600      --------->ARR14(2)      --------->GLK1(2)      <---------ARR14(2) --------At4g35610 >ARR14(2)                                                                           --------->ANAC46 ------->At4g35610                                                         <-----------GT1 ==HOX2a_HOX2a           --------->ANAC46                             <---------YAB1 --------->ANAC58 -ARR14(2) <---------TOE1(2)      --------->YAB1                   <----------DOF2   --------->ANAC58 --------RAV1(2)         --------->ANAC58                <------------------------ANAC81    <-------- ->ZmHOX2a(1)            --------->ANAC58   ------>ZmHOX2a(1)<-----------GT1 --------->ANAC46 ------>ZmHOX2a(2) --->TOE2(3)  --------->ARR14(2) <---------ATHB12       <----------DOF2  <---------WOX13(1) ---------   cagatgcgaatcccagtttccgattaaacgcatcaatgatactctccttattagttttctttttttcatcttttgatttactccaccaaggcatgatctt  23632700                                                                                                <----                                                                                               ------                                                                                               <-----                    --------->ANAC58                                                     <---------ZAT14                    --------->ANAC58            <---------ARR11(3)            <----------DOF2 -------    <---------MYB52(2)                 <XXXXXXXXXXXXXXXXXXXXMIR2937     --------->ZAT6   --------->ZAT14    --------->MYB46(3)      --------->ZAT6  ---------->DOF2      ---------->DOF2        <-----------HVH21 -ARR11(3)        <---------ALFIN1     <----------DOF2     <---------ICU4  *TSS   <-----------GT1  <- >ARR11(3)       <---------ZAT18  --------->ZAT6--------->ARR11(3)    <-----------GT1<---------ALFIN1   cttcccacaaaccaagaggcacactcactcacactatcactcttttaaaagctcttgttcaacattacaaagtaactctccttttgaccacttcagagat  23632800           <---------MYB59          --------->ANAC46        <---------WRKY18(1)       --------->WRKY12    --------->MYB52(1)       --------->WRKY38(1)------->GAMYB                                <------------CBF       ----------->HVH21 --------->MYB46(3)                       <-----------GT1      <---------WOX13(1) <---------MYB52(2)                     <---------YAB1     <---------ANAC58 <---------WRKY12                        <---------ICU4     <-------GAMYB    <---------WRKY38(1)                 --------->AHL20(2)     <---------ANAC58--------->WRKY18(1)                  --------->AHL20(1) --ZmHOX2a(2)   --------->TOE2(2)                         <---------AHL20(1) --->ARR11(3)----------->RAV1(1)               ----------->TBP--------->YAB1 ----ARR11(3)------>MYB46(1)             ------------>CBF <---------AHL20(2)                        < -->GLK1(1)--------->MYB46(3)      ---------->DOF2 --------->ANAC46 >>>>>>>>>>>>>>>>>LFY            - --------YAB1------>MYB83<---------MYB55(2)  ----------->TBP <---------YAB1                         -   catacttggttgacccaacataggtcaacaaacgaagaaaagtcccaatataaacaccattttattattatcccattggtgttttgaccacaataccaag  23632900            ------>ZmHOX2a(2)           --------->CCA1(2)           <------ZmHOX2a(2)          --------->AGP1          <---------ARR14(2)          <---------ARR11(3)          --------->ARR11(3)                                   --------->LBD16          <---------AGP1                                      <---------ANAC55(1)        <-------TEIL          --------->ARR14(2)                                  <---------ANAC58          --------->CCA1(2)      ---------->DOF2                                         <---------ANAC58 <-------TEIL   --------->TOE1(3)                                          <---------ANAC55(2)      <---------ARR14(2) --------->GLK1(2)                      <---------TOE1(3)     --------->ANAC55(2)      --------->ARR14(2) ------->TEIL<---------YAB1             <---------TOE2(3)     <---------ANAC46--------->CCA1(2) ---------ARR14(2)                   <---------MYB52(1) <---------YAB1       <---------ARR14(2) -------->ARR14(2)                  <----------DOF2   --------->YAB1         --------->ARR11(3) -------->ARR11(3)     ----------->RAV1(1)        --------->MYB46(3)         --------->ARR14(2)  <---   aagaacctgaaagatctgattacaacaacaaaacccagcgttagggtttacaacaactatgattccgtgtgaaattgaagatacagacagatacaaaatt  23633000                                                                                                 ----                                                                                              -------                                                                                           --------->YAB1                                                                                          <---------YAB1                                                                                        --------->YAB1                                                   --------->ANAC58                    ----------->GT1                                                   --------->ANAC58                    <---------YAB1                                          --------->ATHB12                  --------->ARR11(3)-------           ---------->DOF2               <---------YAB1         --------->AHL20(2)<---------ANAC58         --------->ANAC46   <---------At4g35610    --------->ANAC46 --------->AHL20(2) --------->ICU4 --------GT1         --------->AHL20(2)--------->YAB1           --------->YAB1    <---------ANAC58---   caccagaattcacagaagcccaattttttcagcaaattctaaaatgatagaacacccaagagataataaaaaaaatagcatcttgagtgatgataataaa  23633100                                                                         <-------TEIL                                                                        <------ZmHOX2a(2)                                                                       --------->ARR11(3)                                                                       --------->AGP1                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                                                                       <---------ARR11(3)    --------->YAB1                                           --------->At4g35610 ------>DOF2                                                --------->ANAC58 -->AHL20(2)                                                --------->ANAC58 -->YAB1               <---------At4g35610               --------->AtMYB61            --------->At5g28300 ------>DAG2 <---------GLK1(2)                           --------->TOE2(3)           ----------->GT1   aaagtatcatcttcagattagtttgagctagtttcaaaaatcaatgtgatcatcttcaacctaagctacacaagatccatttccaaacagtaactcaaaa  23633200                --------->GLK1(1)                <------ZmHOX2a(2)               --------->AGP1               <-----------ARR10               --------->ARR11(3)               --------->ARR14(2)               <---------ARR14(2)               ------->TEIL          --------->GLK1(1)          --------->MYB52(1)         <---------GLK1(1)    --------->AtMYB61            --------->HSFB2a(2)                                        <--------   --------->ANAC46              <---------HSFB2a(2)                                        ---------   --------->bZIP60(2) ----------->GT1     --------->LBD16                      --------->MYB46(3)   --------->ZAT2     --------->ANAC46   <---------LBD16                       --------->ANAC58   --------->O2<---------ARR11(3)<---------HSFC1(1)               <---------------AGL15    <---------CCA1(2)   --------->TGA1a <---------REM1(2)--------->ARR14(2)   --------->MYB52(1)    --------->ANAC58 <---------ALFIN1------>ZmHOX2a(2)--------->LBD16   ----------->RAV1(1)      --------->MYB46(3) <----   ttcccacctcacaaacggatctacacagaaaaattccagaaaccccagaaacaacaacaaaacgaaaaccctaagtagaacaaccaattgctcaaatcta  23633300  Previous    Next  AGI:  At1g63700.1    Description:  YDA (YODA); kinase. similar to MAP3KA (Mitogen-activated protein kinase kinase kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT1G53570.1); similar to MAP3KA (Mitogen-activated protein kinase kinase kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT1G53570.2); similar to MAP3KA (Mitogen-activated protein kinase kinase kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT1G53570.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO62837.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65619.1); similar to B0103C08-B0602B01.10 [Oryza sativa (indica cultivar-group)] (GB:CAH68053.1); contains InterPro domain Serine/threonine prote Range:  from: 23628329    to: 23632775    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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