Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                            <--------         <---------MYB52(1)                                                               --------->DOF5.7(2)        <-----------HVH21                                                                --------->TOE2(3)       <---------ANAC55(2)                                                               --------->TOE1(3)      ------>ZmHOX2a(2)                                                                 --------->ANAC58 ------->ARR14(2)                                                 ----------->GT1       --------->ANAC58 --------ARR14(2)        <-----------GT1                --------->ARR11(3)              --------->ANAC46 -----ANAC46          ----------->GT1                   <---------GLK1(2)             <---------ALFIN1 -----ANAC58     <------MYB83                           <---------ARR11(3)        --------->MYB46(3)< ---->ANAC55(2)  <------MYB46(1)                      <---------TOE2(3)         <-----------GT1     < -----ANAC58--------->ICU4                    --------->ATHB12  ---------->DOF2<-----------GT1   <--- --DOF2--------->ANAC55(2)             --------->YAB1 ----------->ARR10    --------->ATHB12 <xxxxxxxx   gtatttgatccgtcatatttggttttgtaacattttttctatgaaaaaccattgctaagatttttgtaaagaaaaattgatttaacctccacgttaacgt  23617700                                                                    --------->YAB1                                                                ------>ZmHOX2a(2)                                                               --------->CCA1(2)                                                              <---------ARR11(3)                                --------->AHL20(2)            --------->ARR11(3)                                <---------AHL20(2)            <---------AGP1                                <---------AHL20(1)            --------->AGP1                                --------->AHL20(1)   <---------AHL20(2)   --------->CCA1(2)           <---------AHL20(2)    --------->AHL20(2)  <---------ARR11(3)   <---------HSFB2a(2)          --------->AHL20(1)  --------->ARR11(3)   --------->HSFB2a(2)          <---------AHL20(1) --------->ATHB12 --TOE2(3)         <---------ANAC58                 <---------AHL20(2) --------->ATHB51 -DOF5.7(2)        <---------ANAC58                 --------->AHL20(2)<---------YAB1 ---------TOE2(2)--------->ARR11(3)   --------->AHL20(2)  ---------->DOF2 --------->AHL20(2) ---------TOE1(2)<---------ARR11(3)  <---------AHL20(2)  <---------AHL20(2) ------ANAC46   <---------CCA1(2)   --------->AHL20(2)   --------->AHL20(2) xxxxxxxxxxxxxxxsmallRNA(i2)   --------->AHL20(2)--------->YAB1<------ZmHOX2a(2)   cgtagatatagagacactatatcttgcagaaaaataaatttaaaatatcaaaaataaaattaaagatctaacataattgaatatacaaataacaaaatat  23617800                                                                                                 <---                                                                                                 ----                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            <--------                                 --------->AHL20(1)                              <---------AHL20(2)                                 --------->AHL20(2)                             <---------AHL20(2)                                 <---------AHL20(2)                             --------->AHL20(2) <-                               <---------AHL20(1)                  <---------ICU4--------->AHL20(2)<-                              --------->YAB1             <---------YAB1      <---------AHL20(2) <----                            --------->AHL20(2)       --------->TOE2(3)      --------->AHL20(2)  -----                   --------->ANAC58                  --------->TOE1(3)  <---------YAB1      ---------                   --------->ANAC58             <----------DOF2   <---------AHL20(2)<---------AHL20(2)                  --------->DAG2--------->AHL20(2) <---------TOE2(3)  <-----------GT1   --------->AHL20(2)                 ---------->DOF2<---------AHL20(2)<-----------GT1 --------->AHL20(2)--------->AHL20(2)   gagaaaaatactaaatcggaaaagcatttttaaaataatttagtattgtgttttacgttaatattctattaattactatttattaatttataaaataaat  23617900         --------->AHL20(2)         <---------AHL20(2)        <---------YAB1                       <---------AHL20(2)      --------->YAB1                      <---------AHL20(2)     <---------YAB1                       --------->AHL20(2)  <---------YAB1                         --------->AHL20(2)  <---------AHL20(2)                    <---------YAB1 <---------AHL20(1)                   <--------HAHB4 ------AHL20(2)                       --------->ATHB51 ----->AHL20(2)                       <---------ICU4 ->AHL20(2)                          --------->ICU4                                                 < --AHL20(1)                          <---------YAB1                                           ------- ->AHL20(1)                        --------->YAB1                         <-----------GT1     <------ --AHL20(2)  --------->AHL20(2)    <--------HAHB4                     <----------DOF2       --------- -AHL20(2)  <---------AHL20(2)     -------->ATHB1                  <---------ARR11(3)     --------->ANAC46 --------YAB1<---------AHL20(2)   <---------ATHB12                 <---------ARR11(1)  <---------ZAT14 --------TOE2(3)       <---------AHL20(2)<---------AHL20(2)        --------->ARR11(3)  --------->ZAT18 -----AHL20(2)   --------->AHL20(2)<---------ICU4                 <---------CCA1(2)    --------->ZAT14 ---->AHL20(2)   --------->YAB1   --------->ICU4            ------>ZmHOX2a(1)          <---------ZAT18 >AHL20(2)  --------->AHL20(2)  --------->WOX13(1)        ----------->RAV1(2)      <---------------AtSPL8   taatattattataaattaataaaaatttatagtccaatcattattaatttatagagtttctcctgtacatatcttttaatcgtttttagtacacactgca  23618000                                                                                      <-----------HVH21                                                                          --------->LBD16                                                             ------>MYB46(1)     <-----------GT1                               ------->TEIL--------------->AGL15         <---------LBD16            *TSS <----------DOF2      <----------DOF2      <---------------AGL15        ----------->RAV1(2)       <-- ---------MYB52(1)    --------------------->WRI1             ------>MYB83--------->LBD16         <--- -->ZAT14    <----------DOF2--------->ANAC58               <---------MYB59--------->HSFB2a(2)    <--- ---ZAT14  <------NtERF2    --------->ANAC46              --------->ANAC46<---------HSFB2a(2)<------- >ANAC46  ------>NtERF2     --------->ANAC58      ----------->GT1       <---------LBD16      <-------   ccgttttatcggcgtctttgatttctttaaacgcatcgtttgtaacccaaaaatgaaaaaacccaactcttatcccctggaaaaaacctttcactgcttg  23618100                                <----------DOF2                               <---------DAG2 --------DOF2              --------->WRKY38(1) ------ANAC58             --------->DOF5.7(2) ------ANAC58           <---------ANAC46                                  -------->P --ANAC58               <---------ANAC58             <----------DOF2    --------->MYB46(3)   -------- --ANAC58               <---------ANAC58   ------>ZmHOX2a(1) <---------------AGL15       ------>ZmHOX2a(1)   ctttctcagtctctctgtctccaatggcgttcacctttctctctcctcacccagtctttctctctctaactggaacaacctcttccttctcctacaaacc  23618200                                                 <---------At4g35610                                                <---------ARR14(2)                                                --------->ARR14(2)                                               <---------PCF2                                              <------NtERF2                                             ------>NtERF2                                             <---------ATERF1(1)                                           ------>NtERF2                                           <------NtERF2                                          <---------RAP2.3(1)                                         <---------ANAC58                                         <---------ANAC58                                         <---------DEAR3(1)            --------->ANAC46                                         <---------RAP2.6(2)          <---------HSFB2a(2)                                         <---------RRTF1(3)           --------->HSFB2a(2)   <--------                                         <---------RRTF1(2)      <---------ANAC58          --------->MYB46(3)                                         <---------RAP2.3(3)    --------------->AtSPL3    ===========                                         <---------RAP2.3(2)  <---------GLK1(1)           <------ZmHOX2a(2)                            --------->SPL7<---------RRTF1(1)  --------->GLK1(1)<---------ZAT2    ----                            --------->ZAT14<---------LBD16 --------->LBD16     --------->ZAT2 -------                          <---------SPL7 <---------ANAC46 --------->LBD16      <---------At4g35610                         --------->ANAC55(2)<---------ANAC46<------NtERF2      --------->At4g35610  -                        --------------->AtSPL8----------->HVH21 --------------->AtSPL8   <---------ARR14(2)               <---------HSFB2a(2)      <---------LBD16  <---------LBD16  ------->TEIL   --------->ARR14(2)       <---------YAB1   --------------->AtSPL3--------->ATERF1(1)<---------ANAC58 <---------At4g35610 ->ANAC46      --------->HSFB2a(2)   <-------GAMYB  --------->ZAT2  --------->SPL7--------->At4g35610   agttctcttaccattctctcgaaattcccgtactctcacggttgcggcgggacctgctcgccggaattcgtacccgaaccctgctgatgacgatccacct  23618300                                                                      --------->ANAC58                                                                  --------->ANAC46                                                                  --------->ANAC58                        --------->HSFB2a(1)                       --------->ANAC55(1)                        <---------HSFC1(2)                       <---------LBD16                        <---------HSFB2a(1)                    --------->ZAT14                        --------->HSFC1(2)            <---------At4g35610                    --------->ANAC58             <-----------HVH21--------->ANAC58          --------->ARR14(2)               <------ZmHOX2a(2)   <---------ZAT14          <---------ARR14(2)              --------->ARR14(2)   --------->ZAT18                   ----     --------->LBD16--------->ANAC58      <---------ARR14(2) ------->MYC2                     -------   <---------LBD16 <---------LBD16        --------->AGP1     <-------PIF5                 <---------HSFB2a(2)  --------->MYB52(1)--------->ANAC46      --------->ARR11(3) ------->PIF5                 --------->HSFB2a(2) -ALFIN1 <------ZmHOX2a(1)               --------->GLK1(1)   <-------MYC3                 --------->HSFC1(1) ===============HOX2a_HOX2a              --------->At4g35610 <-------MYC2            <---------ARR11(3) ------>DOF2     --------->ZAT14      <---------At4g35610    ------->MYC3     <------ZmHOX2a(1) <---- ---->RAV1(2)    <---------ZAT14      --------->At4g35610   <------------------SPL14 --------->ARR11(3) -------->MYB46(3) ------->TEIL --------->HSFC1(2)    <---------ZAT2  --------->ANAC58    <---------HSFC1(1)   gaagcaccggaggattcaatgcacggagtttcgaagtttcagcagatccagcgtcaagctgctcgtgcacggaagctagaggaagaagatttcgagaaga  23618400                                                  ----------->HVH21                                                <---------O2                                             --------->ARR14(2)                                             <---------ARR14(2)                                             ----------->HVH21                                            <------NtERF2                                            --------->ATERF1(1)                                           --------->LBD16                                          <---------DEAR3(1)                                          <---------ANAC46                                         <---------LBD16                                         ------>NtERF2                   <---------ANAC46                                         <------NtERF2                <-----------RAV1(1)                                         --------->ATERF1(1)       <---------ARR14(2)          <---------CCA1(2)   --------->ALFIN1  --------->O2       --------->ARR14(2)      <---------ANAC55(2)--------->DEAR3(1)<---------ATERF1(1)     --------->GLK1(2) ----->GLK1(2)   <---------At4g35610    <---------ATERF1(1)       <---------GLK1(2) ---->ARR10      --------->At4g35610   <---------DEAR3(1) ----------->TGA1                        --- -----ARR14(2)  --------->ANAC46      <---------LBD16     ----------->HVH21                --------->GLK1(1)   atcggaacacttatctctccgctatcgccgatgtggaagacgcggcggagacgggacgagatgacgaagaatctggtggagacttgttctctgatatcga  23618500                                                                 --------->ANAC58                                                                 --------->ANAC46                                                               --------->MYB52(1)                                     --------->ICU4       <-----------------AGL1                                    --------->ANAC58     ------>ZmHOX2a(1)        --------->ARR14(2)                                    --------->ANAC58------>MYB46(1)               <---------ARR14(2)           --------->AtLEC2     --------->ANAC58    ------>MYB83--------->RAP2.6(3)        <------ZmHOX2a(1)           --------->ANAC46     --------->ANAC58  <---------MYB59--------->ANAC58--------->ATHB12  -- ------->DOF2           ------------>MYB.PH3(2)   --------->TOE2(3)   <------NtERF2      --------->ALFIN1   tagagcaatctccatgaaacgtagtgagtttgttaagcaaggattgctcaaacctaatcctcccaaaacggcatcgcttaagaagattggggaggaggga  23618600  Previous    Next  AGI:  At1g63680.1    Description:  ATMURE/PDE316 (PIGMENT DEFECTIVE EMBRYO); ATP binding / ligase. similar to unnamed protein product [Vitis vinifera] (GB:CAO62833.1); similar to hypothetical protein OsJ_031101 [Oryza sativa (japonica cultivar-group)] (GB:EAZ16892.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ66890.1); contains InterPro domain Mur ligase, N-terminal; (InterPro:IPR000713); contains InterPro domain Mur ligase, central; (InterPro:IPR013221); contains InterPro domain Mur ligase, C-terminal; (InterPro:IPR004101); contains InterPro domain UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; (InterPro:IPR005761) Range:  from: 23618100    to: 23620764    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version