Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ATHB12                                  --------->ARR14(2)                   ------>ZmHOX2a(2)  --------->At4g35610                              <---------At4g35610                 --------->ARR11(3)   <---------At4g35610                              --------->At4g35610                 <---------ARR11(3)   --------->LBD16                              ------>ZmHOX2a(1) -ARR10      --------->ANAC55(2)  <---------ARR14(2)                       <-----------ARR10   ccttgttttaggcttacatgatctctcttcttccacaatccgctgaacaaatcaagagatttagtttctcactcacaaatctctccttaagctaaaccaa  23613300                                                              --------->At4g35610                                                              --------->ZAT2                            ----------->HVH21       --------->ANAC58                        --------->ZAT14             --------->ANAC58<----------DOF2     ------>MYB83                        <---------ZAT14     <---------HSFC1(2)<---------ZAT2    <---------ICU4                    <---------ICU4          --------->HSFC1(2)<---------At4g35610       ------>MYB46(1) <----------ID1  --------->REM1(1)         ------->TEIL   <---------ATHB12    <-----------GT1 -------   aaaactacaaaaaaaacttacatcattacactgacacttctcatgaagcttcttaagcaaatcaagctgacttttagtataaacattacctacaaaaaaa  23613400                                                                             --------->GLK1(2)                               --------->ANAC58                             <---------ARR14(2)                               --------->ANAC58                             --------->ARR14(2)                          --------->ANAC55(2)                               <---------GLK1(2)                          <---------ANAC55(2)                           --------->ZAT2                       <------ZmHOX2a(2)   --------->ANAC58             --------->At4g35610                      <---------ARR11(3)   --------->ANAC58             <---------At4g35610                      --------->ARR11(3)   --------->ANAC46            ----------->RAV1(1) >>>>>>>>>TBF1 --------->ZAT6<-----------GT1                         --------->MYB46(3)       <<<<<<< ------------------------>ANAC81        ------>ZmHOX2a(2)           -------->P    ----------->HVH21 --->DOF2    <-----------GT1 --------->MYB52(1)                  <---------MYB52(2)     ------->TEIL   gaagaagaatcaaattaacactaagatcatgtaacgaaatgatccaagaaacagtgttttaaaaactactaaccagcagaatctctgacgaatttcttct  23613500                                                                    --------->MYB46(3)                                                                  ------->GAMYB                                ----------->HVH21                 --------->TOE2(3)                           ----------->HVH21                    ------>MYB46(1)                        <---------ARR14(2)        <---------DAG2-------->P       <-----------GT1                        --------->ARR14(2)        <----------DOF2 --------->AtMYB61                        <---------GLK1(2)      --------->ARR11(3)<---------MYB55(2)                    ----------------->AGL1     <---------ARR11(3)--------->MYB46(3)    <---------ANAC46 <<TBF1           <-----------GT1<---------WRKY18(1)            ------>MYB83  --------->YAB1   tctctgaaccaagtctcttattaccagatttgacatgaccgaaatcgaagaactttatcaatttccaaccacaaccagacttataactctcgtagacaag  23613600                                                                                          --------->YAB1                                                                                       --------->WOX13(1)                                                                                      --------->YAB1                                                                                      -------->ATHB1                          ==============================HOX2a_HOX2a                   <---------ICU4                          <------ZmHOX2a(1)                                          <---------ATHB12                       <---------HSFB2a(2)                                          ------>MYB46(1)                      <-------TEIL                              --------->YAB1      ------>MYB83                    --------->ARR14(2)           ------>ZmHOX2a(2)                 --------->WOX13(1)        ----------->GT1--------->HSFB2a(2)     <---------ARR11(3)              <-----------GT1  <----------DOF2   <---------ARR14(2)         --------->ARR11(3) <---------YAB1 ------------>CBF   agggcttttagggaaaattgcaggtccaggactcttactacttcttggtgatctcttcttctccattgatgatcaacaaattcaccaatcattcaaaact  23613700                                                       --------->ARR11(3)                                                       <---------ARR11(3)                                                      <---------CCA1(2)                                              <---------AHL20(2)                               <---------ARR11(3) <-----------TBP                      --------->YAB1                     <---------ARR14(2)      <---------AHL20(1)              --------->GLK1(2)  -----                     --------->ARR14(2)      --------->AHL20(2)              --------->ARR11(3)------           ----------->GT1 ---------->DOF2   <---------AHL20(2)              <---------ARR11(3)------    ------------>CBF <---------GLK1(2)  ------------>CBF  <----------DOF2   --------->RVE1(1)--------   ctcgtcttcaatctagtaaaaccgattctcaaagacctgaaaaacaatttttttttatatcttttagcattaaactaaaaatcttacaaacatagcaaca  23613800                                                                        <---------TOE1(2)                                                                       --------->LBD16<-----------GT1          --------->GLK1(1)             <----------DOF2                ------>ZmHOX2a(1) ------>RAV1(1)                     <---------ANAC58                  <---------LBD16<-----------GT1 --->MYB46(3)                       <---------ANAC58            <-----------GT1 <----------DOF2 --->REM1(1)                    <------------CBF         ------------>CBF      <---------DAG2       - --->RAV1(1)                   <---------ICU4    --------->ANAC46    ----------->RAV1(2)            -   acaaaaacagagaattcttcaaatagtgtccaaaaattgcttcttttgtatacaaaactgtcaattttacttcctgggttacctttttttccttccccta  23613900                     <---------YAB1                     ----------->TBP                                    <---------------AGL15                --------->YAB1                                          --------------->AGL15               <---------YAB1                               <---------HSFC1(2)           <---------GLK1(2)                                <---------HSFB2a(1)              <-------           --------->ARR11(3)                               --------->HSFB2a(1)            --------->YAB1           <---------ARR11(3)                         ---------->DOF2   --------->TOE2(3) <---------YAB1         ----------->ARR10                     --------->YAB1      <---------MYB52(1) <----------DOF2 -------->TOE1(3)  --------->YAB1             <-------TEIL  --------->HSFC1(2)       <---------ICU4 -------->TOE2(3) <---------YAB1  <---------YAB1 --------->AtLEC2 <----------DOF2   --------->ICU4   aaccctaaactgagattttcattataaaaaaaacttctcattcagacattcatgaaaaaagaaacttcctttagcctaaaaatgtaatctttatcataaa  23614000                                            <----------DOF2                                       --------->LBD16                                     <---------LBD16                                    -------->P                                    --------->MYB52(1)                                 <---------ANAC58                             --------->CCA1(2)               --------->TOE2(3) <---------ANAC58                                <---------DAG2        <---------ARR11(3)  <---------ARR14(2)    <-------GAMYB            <-------TEIL        ------        --------->ARR11(3)  --------->ARR14(2)   <---------MYB46(3)  ---------->DOF2 <---------YAB1 --YAB1<---------CCA1(2)  ----------->ARR10 <---------DAG2     ----------->GT1   <----------DOF2   taagtgagtatatcttacataaataagagagatttgcttaccggagctttttggttgaaatgagtcagaaaaaaagatgcaaactttatgtttgtctgtg  23614100                 <----------DOF2               <---------ZAT2               --------->At4g35610               --------->ZAT2       --------->ANAC58       --------->ANAC58                                      --------->TOE2(3)     ---------->DOF2                                ----------->GT1    <---------ATHB12    --------->ICU4             ----------->GT1<---------GLK1(2)              >>>>  --------->WOX13(1)    <---------YAB1            --------->DAG2  --------->ARR11(3)      ---------->DOF2 --->ALFIN1    <---------At4g35610               ---------->DOF2  <---------ARR11(3)    <---------YAB1   gagccaatcaagcactcagctttgtgatgatggagagactgaataaacatgaaaagttaaaaaccatagatttttgtttctacatagattataaaagaag  23614200  Previous    Next  AGI:  At1g63670.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39618.1); contains domain PTHR21726:SF8 (PTHR21726:SF8); contains domain PTHR21726 (PTHR21726) Range:  from: 23611085    to: 23613666    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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