Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------AHL20(2)                      <---------AHL20(2)                   <---------AHL20(1)                   --------->AHL20(2)                   --------->AHL20(1)                 <---------ARR11(3)                 --------->ARR11(3)                                                       --------->ATHB12                 --------->AHL20(1)                               <---------YAB1         <---------YAB1                 <---------AHL20(1)<---------MYB52(2)           --------->YAB1     <------ZmHOX2a(1)            ----------->GT1 ----------->GT1                    <---------YAB1     <----------ID1 ----   atttacataaaaacttgaaaatattttatattgtgaaacaaacaaatttcttcagaacatcgtttatcatgaaacgtagagaataggacatatcattgat  23602900                                                         ---------->DOF2                                                       --------->HSFB2a(2)                                                       <---------------AGL15                                                       <---------HSFB2a(2)                                                      ----------------->AGL1                                                      ----------------->AG                                                --------->AHL20(1)                                                <---------AHL20(1)            <---------ALFIN1                                                <---------AHL20(2)     <---------ANAC58                      --------->YAB1            --------->AHL20(2)     <---------ANAC58      --------->ARR11(3)                       <---------AHL20(2)      <---------ANAC46             -      <---------ARR11(3) <-----------GT1       --------->AHL20(2)     <---------MYB46(3)     -------- ------->GT1     ----------->GT1             --------->YAB1       --------->ALFIN1       ---------->DOF2   agaaaaaagattttagagatggaaaaataactaatttctcttaacaaaaataaatttccaaaaggagagtggtgcttggaacaccgtattcaaaagggtt  23603000                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                     --------->AHL20(2)  <---------ANAC46       <----                                                     <---------AHL20(2)--------->ZAT14          -----                                                 --------->AHL20(2)    <---------ZAT14          -----                                             <---------AHL20(2)   ---------->DOF2             -------                                            --------->AHL20(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <---------DAG2<---------At5g28300   <---------AHL20(2)--------->DAG2     --------->AHL20(2) -------->ZAT6            <-----------GT1   <---------AHL20(1) --------->TOE1(1)     <---------YAB1 --->GT1     <----------DOF2               <---------AHL20(2) ------>ZmHOX2a(1)   <---------YAB1<----   atacactagacactacttttttttttttttaccatcttgttttatatatatttatttaaaattcctcgtaaagttcagtgttttgtgattatatacagtg  23603100          --------->YAB1       <---------------AGL15       =============================MADS_MADS   <---------ALFIN1 --------->ANAC46 <---------ALFIN1 ------>ZAT18                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------ZAT14                   --------->MYB59 ------>ZAT14                 --------->CCA1(2) -------REM1(2)        ---------->DOF2              ------>ZmHOX2a(1) -------ZAT18       <---------------AGL15           <----------DOF2                        ---------- -----ZAT14         --------->TOE2(3)       <---------ALFIN1                        ----------->RAV1(1) ---->ZAT14         --------------->AGL15  --------->SPL7                        --------->TOE2(3) ---->REM1(2) --------->ANAC55(2)<------MYB46(1)--------->ORA47(1)               ------->GAMYB -------->AtSPL8   ----------------->AGL3<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->MYB46(3) -----ZAT18   <---------ANAC55(2)<------MYB83  --------->DEAR3(1) ---------->DOF2--------->AtMYB61  -   tacacacacctaaaataagtatccataaagagatttggtcattcggacaccgtccttttctctcaactcaaagctcaattcaaccacaacagatagtaac  23603200                            <---------YAB1                         <---------------AGL15                         --------------->AGL15                        ----------------->AGL2                        <-----------------AGL2                        ----------------->AGL3            <---------LBD16                           -                        ----------------->AGL1       --------->ARR11(3)                             -                      <-----------GT1                --------->AHL20(1)                           ---                   <---------ARR11(3)                <---------ARR11(3)                           ---                   <---------AHL20(1)                <---------AHL20(1)                         <----                   --------->AHL20(1)           --------->AHL20(2)                         <------ZmHOX2a(1)                   --------->ARR11(3)           <---------AHL20(2)  ---------->ID1      <---------LBD16                   <---------ICU4           --------->AHL20(2)    <-----------RAV1(1)   <-----------RAV1(2)              --------->AHL20(2)     ----------->GT1 <---------AHL20(2)                ------>ZmHOX2a(1) ->GT1     --------->AHL20(2)  <---------HSFB2a(2)   --------->AHL20(2)           <-----------------AGL1 --------->DOF2<---------AHL20(2)   ----------->GT1 --------->AHL20(2)         <----------DOF2  -----   ttgaaagtcacaaatatttaatattttcccattatagaaggttaaaaaaaataaatatattctgggttttgttgtcttcttctttcttcctcaggaaacc  23603300         <---------ANAC55(2)         --------->AtLEC2         ----------->GT1     <-----------HVH21 ----------->CBF                             --------->AHL20(2)                    <---------AHL20(2) -------->MYB46(3)                         <----------DOF2                        --------->AHL20(2) --->MYB46(1)                       --------->YAB1              <-----------GT1  <---------WOX13(1) --->MYB83      *TSS      <---------ICU4  --------->TOE1(3)<---------DAG2     <---------YAB1     ---- -----MYB59    <---------ICU4      <---------ZAT6        <------------------------ANAC81---------->DOF2 ---->AtMYB61 --------->ICU4<---------YAB1--------->TOE2(3)<----------DOF2 <----------DOF2   <-------   aaaccaatgtcatgtaaaaatcactaactcatgactagtcataacctttaaatcacttctgctttttttctgtttctcttttgatttattcaaagacaac  23603400                                                                                                 <---                                                                                                 ----                                         <---------MYB46(3)                                     <----                                         --------->MYB52(2)                                    ------                                 <---------MYB46(3)                                            <-----                           <----------DOF2                                                     <-----                          ------>ZmHOX2a(2)                                  ----------->GT1   ------                        --------->ARR11(3)   --------->MYB52(2)              --------->LBD16  ------>NtERF2                        <---------ARR11(3)   <---------MYB46(3)             ------->GAMYBxxxxxxxxxxxx                   <---------ARR11(3)   <---------TOE1(2)                  <---------LBD16   <------- ------>DOF2       --------->GLK1(2)   <---------MYB52(1)                 --------->MYB52(1) -------- ---ID1           --------->RVE1(1)  --------->MYB52(2)                   -------->P    --------->MYB52(1)   aaagttttgtttttgacaaaaaatctgatctttgtttgttcgtttgtttgttacatggggatgaagaaacaatggcaaccggagaaaacagaacggtgcc  23603500      ---------->DOF2    >>>>>>>>>RAP2.2  --------->GLK1(2) ------SPL7 ----->LBD16 -----ANAC46 --->ATERF1(1) ----LBD16     <---------At4g35610 -NtERF2       --------->ZAT2                           <---------HSFC1(2) --------->AtSPL3    <---------TOE1(2)                  --------->HSFC1(2) xxxxxxxxxxx>smallRNA(si3)                              --------->HSFB2a(1)              <-------TEIL --DEAR3(1)    <---------ZAT2 <---------------------WRI1<---------HSFB2a(1)      -------->P     <---- ->ALFIN1      --------->At4g35610                    <---------GLK1(2)  <---------At4g35610    -----   ggacaatctaaagaaacagctcgcagtttcagttcgaaacattcaatggagttatggaatcttctggtctgtctctgcttctcaaccagggtacaatctc  23603600          ------>ZmHOX2a(1)         --------->TOE2(3)         --------->TOE1(3)                                                                 ------>ZmHOX2a(1)   <----------DOF2                                                                        --------->TOE2(3)  <---------ICU4     <----------DOF2                                                    <---------YAB1 --------->ICU4      <---------DAG2                                                 <----------DOF2 -----ANAC55(2)   <-----------GT1 ---------->DOF2           <----------DOF2         <---------DAG2 ---->ANAC55(2)  --------->AHL20(2)                 --------->GLK1(2)       --------->At4g35610   gtaatctttatccttcaaattaacttttcttgaaaataaagttttgtttgagacattcttgactttagtccaaaactcagataaaactttatccttactt  23603700                                                                                     --------->ALFIN1                                                                                   <---------ANAC58                                          <---------ANAC58                         <---------ANAC46                 <---------YAB1           <---------ANAC58                         <---------ANAC58 <---------ARR11(3)                  <---------DAG2                          --------->ALFIN1 ------- --------->ARR11(3)     --------->HSFB2a(2)         <----------DOF2          <-----------RAV1(1)    <   caagatttcgatttttgttatgttttctcgattaatccaatttttcttggctatcttttttgttttctctaaacgaagagtgttggagtggggagatgga  23603800  Previous    Next  AGI:  At1g63650.1    Description:  EGL3 (ENHANCER OF GLABRA3); DNA binding / transcription factor. Identical to Transcription factor EGL1 (BHLH2) [Arabidopsis Thaliana] (GB:Q9CAD0;GB:O22418); similar to GL3 (GLABRA 3), transcription factor [Arabidopsis thaliana] (TAIR:AT5G41315.1); similar to GHDEL65 [Gossypium hirsutum] (GB:AAK19613.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 23603316    to: 23606565    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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