Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->AHL20(2)                                                                     --------->MYB59  <---------AHL20(2)                                       <---------YAB1          <---------------AGL15 <---------AHL20(1)                                 <---------ARR11(3)       <----------DOF2     --------->ANAC58                      <---------AHL20(1)               <-----------GT1        --------->ANAC58                      --------->AHL20(1)               <---------AHL20(2)  <---------MYB52(2) ------bZIP60(2)      --------->AHL20(2)   --------->AHL20(2)  --------------->AGL15 --------->AHL20(2) ------ANAC46  --------->AtLEC2----------->GT1---------->DOF2 <-----------------AGL1 <---------AHL20(2)   tgtgttattccattgatatgcaaatattttagggagataatttgattaaaaagaaatttactttagctattttggtaactaagccaatttaatttgacta  23566600                                             <---------AHL20(2)                                            --------->AHL20(2)                                        --------->AHL20(2)                                        <---------AHL20(1)                                        --------->AHL20(1)                              <-----------GT1                                      --------->AHL20(1)                       -------->ATHB1                                      <---------AHL20(2)                       --------->YAB1                                      <---------AHL20(1)                       --------->ATHB12                                   --------->AHL20(2)                          <---------ICU4           <---------YAB1  <-----------GT1 <---------AHL20(2)                 <---------YAB1    <----   aacaatatggtttatgaaaaaaatcagtttttctatataaaatattttaaattttcaaaacatggccaaaatttcaaaaaatcattgtattatccatttt  23566700                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                              <------                                                                                              -------                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(2)                                                                                    --------->AHL20(2)         <----------DOF2                                                           <---------AHL20(2)         <---------DAG2                                                           --------->AHL20(2)   ------>ZmHOX2a(1)                                  ----------->GT1   --------->GLK1(1)--------->AHL20(2) -------GT1   <-----------GT1  <---------MYB59<-----------GT1  ----------->HVH21------->TEIL<--------   tcttcctagcactttttttcttatcaacttgtgcctaattcatgaaattatccatttagttaaacttgacagagatttcatgaatttaaaataaaataat  23566800         ---------->DOF2  --------->YAB1 <---------ATHB12 <---------YAB1 -------AHL20(2)                <---------ANAC46 ------>AHL20(2)              ------>NtERF2 ------AHL20(2)             <---------LBD16 ----->AHL20(2)             --------->RAP2.6(3)                                                     - ---AHL20(2)               --------->MYB52(1)             ------------------------>ANAC81          -- -->AHL20(1)            --------->HSFB2a(1) ------->GAMYB<------ZmHOX2a(1)                    <------ZmHOX2a(1) -->AHL20(2)            --------->HSFC1(2) --------->ANAC58                                <---------LBD16 ->AHL20(2)   --------->ATHB12--------->LBD16 ----------->RAV1(1)        ----------->GT1   --------->LBD16 --AHL20(2)----------->GT1<---------SPL7   --------->ANAC46       --------->MYB52(1)      <---------ANAC46 -AHL20(1)--------->DAG2<---------HSFB2a(1)--------->ANAC58----------->GT1       ------------>CBF ---   ttaatcatagagaaagtgattagagagccttccggcttgaaaacaacgccacaagaataggaagaaaaaaacagaatgaaaaaaacaatcttccgaggaa  23566900             --------->ANAC58           <-----------RAV1(2)                                                 --------->At4g35610         --------->ANAC58                                                      <---------At4g35610         --------->ANAC58                                        <---------ZAT18       <------ZmHOX2a(2)       --------->CCA1(2)                        <---------AHL20(2)   <----------DOF2   ==============  ---------->DOF2                       <---------MYB46(3)  ---------->DOF2   *TSS    <---------ARR11(3) -------->DOF5.7(2)   ---------->DOF2  <---------TOE1(2) --------->TOE1(3)   --------->REM1(1) ------->TOE2(3)---------->DOF2       <---------MYB52(1) --------->TOE2(3)--------->TOE2(3)      <--- -------->GT1--------->ANAC58<---------CCA1(2) --------->AHL20(2)--------->ZAT18      --------->ARR11(3)   gcgttaaagagacgcaggcaaagtcaaagtcaaatctctcgtttgtttataaaatgaaacctcaaagtgctcttttccttcatcagaagatcaccatttc  23567000                                          --------->At4g35610                     --------->ZAT6       <---------At4g35610                  <----------DOF2        <---------ALFIN1                 <---------YAB1           <---------At4g35610 --------->LBD16                 <-------TEIL           --------->At4g35610 <-----------HVH21            <---------HSFB2a(1)                    -- ======================HOX2a_HOX2a<-------GAMYB ------>ZmHOX2a(1)      <---------YAB1             --- -------DOF2    ------>ZmHOX2a(1)<---------MYB46(3)         --------->HSFB2a(1)                   <--   ttttgcctcagtaagctcctctttcactatctccgtcgttgctccgcttcctactggttcaaaggttcgatttgtgattcttgaaacatttctaatactg  23567100                                                                                 <----------DOF2                  --------->ATHB12                                            --------->ANAC58                <---------WOX13(1)                                            --------->ANAC58               <---------ANAC58                                               --------->ANAC46             <---------YAB1   <---------ARR11(3)                             <---------ZAT18      <----------DOF2         --------->ARR11(3)                   <---------ANAC58                 < ---->ZmHOX2a(2)--------------->AGL15              <---------ICU4  <---------ANAC58                <- ------>GLK1(1)<---------AtLEC2       <-----------GT1  <---------ZAT18 <----------DOF2            --- -------GLK1(1)<---------ANAC58<------ZmHOX2a(2)  --------->ICU4   <---------ANAC46              ----   atctctgtctttgttttgcttgatttgggttagatcatattttccttctgcaattagggctcttgagttgcttcttttgcacgctttctcatactgtttc  23567200             <---------GLK1(2)           <---------YAB1         <----------DOF2                                                           <----------DOF2 ---------ARR11(3)         <---------MYB52(1)                            <----------DOF2 --------CCA1(2)           --------------------->WRI1                  ---------->ID1 --->ZmHOX2a(1)          <---------ANAC58                  <---------GLK1(2) <-----------GT1        < ----->TOE2(3)           <---------ANAC58         <----------DOF2     <-----------GT1             ---   cttatcttctactttgattctctgttttcgtttgtaagtatcgattcaacagctttgtatcgattctctgtttttcttttttcttctttgttaacagttt  23567300                                                                                                    -                                                                                                    -                                                     >>>>>>>>>>>>>>>>>LFY                         <--                                              --------->ARR14(2)                          --------->ARR14(2)                                              <---------ARR14(2)                          --------->GLK1(2)                                             <------ZmHOX2a(1)                            <---------ARR14(2)     ---------->DOF2                     <---------ZAT14                    --------->ANAC55(2)  ---- ----------ID1      <--------P         <---------ZAT14            --------->GLK1(2)      <---------GLK1(2) ------->DOF2      <-------GAMYB       --------->ZAT14<---------YAB1        --------->TOE2(3)   -----   gaaagacaaaagaagaatgagggttgatttttctgagccagagtacaggaactgttaccattgtcgcgattcaggcatacttaatactcaagaatctgaa  23567400                                             --------->LBD16                                            <---------HSFB2a(2)                                            --------->HSFB2a(2)                                           --------------->AtSPL3                                     <---------MYB52(1)                                     <--------P                                    <---------MYB52(1)                                   --------->LBD16                                  <---------ANAC46                                 <---------LBD16          <---------WOX13(1)   <---------ARR14(2)                                           ---------       <---------YAB1          --------->ARR14(2)                          --------->At4g35610 ----->MYB83               --------->ZAT14 --------------->AtSPL8          <---------At4g35610 ----->MYB46(1)        <---------ALFIN1----------->ARR10                  <-----------RAV1(1) -------MYB59        <-----------HVH21 --------->MYB52(2)               <---------At4g35610 --------- ----->DEAR3(2)     --------->WOX13(1) --------->MYB59    <---------ARR11(3)                --------- -->TEIL--------->ATHB12   <---------ZAT14 <---------LBD16--------->ARR11(3)        <---------MYB46(3)   ccgaacaatgtgattggctcatccatcacttcagttccggttagttccggaccatttcaagctcttggacatgcttctgctgctattggttcaacctcaa  23567500  Previous    Next  AGI:  At1g63530.1    Description:  similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G63540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62858.1) Range:  from: 23566978    to: 23569218    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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