Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ---------->DOF2                                                   --------->TOE2(3)                                                 <---------ARR11(3)                                                 --------->ARR11(3)                                       <---------ARR11(3) ---------YAB1                         --------->AHL20(1)      <---------WOX13(1)                   < ---------AHL20(2)                     <---------AHL20(1)    --------->ATHB12                       - --------AHL20(2)                      --------->ARR11(3)   <---------YAB1                       <--- ------->AHL20(2)           <---------MYB52(1)  --------->RVE1(1)                                ----   ttttaattgtcaaattttcaaatgtagttcgtttatttgaatatttttaaaaatctcaaaagatgattgccaaaatgtttagaaatgccttatttgtata  23538300                     ----------->HVH21                   --------->bZIP60(2)                 <---------ANAC46            <---------MYB46(3)           <---------DEAR3(1)           --------->ALFIN1                      --------->ARR14(2)                                --         <---------MYB46(3)                      <---------ARR11(1)                            ------        --------->ALFIN1                         --------->ARR11(3)                            <-----        <---------AtMYB61  <---------TOE2(3)     <---------ARR14(2)                            <-----      <---------ANAC46  <---------ANAC46        <---------CCA1(2)                              <-----    --------->ZAT14<---------TGA1a              <---------ARR14(1)                             ------    --------->ZAT18==================================================bZIP_DOF                <-------    <---------ZAT14--------->O2         <---------AHL20(2)                                  <-------- <---------MYB46(3)<---------O2        --------->AHL20(2)             >>>>>>>>>ARR2         <-------- ---------DEAR3(1) --------->TGA1a  --------->AHL20(2)                >>>>>>>>>ARR1         <-------- -------->ALFIN1<------NtERF2       --------->YAB1                   --------->ATHB12      <--------- ------TOE2(3) ------>NtERF2    --------->AHL20(2)        ---------->DOF2                  ---------- ----->DAG2<---------AtMYB61 <------ZmHOX2a(1)  --------->GLK1(1)   <---------YAB1         <---------TOE2(3)   aggtggtgcagtggtggtgccatgtgacttaggataaattataaaatagcatatctagagaaaaggccttatgattgtataggtttctagtttgacgtac  23538400 --------->GT1 ->TEIL ----TOE1(2) --TEIL ----TOE2(2)                                                  <---------AHL20(2) --->SPL7                                                    <---------AHL20(1) --SPL7         <---------AHL20(1)                           <---------AHL20(2) -ANAC58        --------->AHL20(2)               <---------YAB1    <-----------GT1 -ANAC58        <---------AHL20(2)         <---------YAB1--------->AHL20(2) -ANAC46  ----------->GT1                --------->CCA1(2)   --------->AHL20(2) ------AtSPL8   --------->AHL20(1)    <---------YAB1     <---------AHL20(2)                 <-------- ----->AtSPL3--------->YAB1         --------->YAB1     <----------DOF2   ---------->DOF2   --------->AHL20(2)   gttgaaaaaaatcagtaataaaatatagcaaattgttttcatgatatgatttttattctttaattaattttactataaagaaatttgctaaaattttata  23538500                              <---------YAB1                            --------->YAB1                            <---------ICU4                                                         --                            -------->HAHB4                                                        <--                           <---------ATHB12                   --------->AHL20(2)                  <--                           --------->ICU4                  <---------ICU4                    --------                    ----------->GT1                       <---------YAB1       <---------ARR14(2) ---                    <---------YAB1              ---------->DOF2<---------AHL20(2)            -------- -AHL20(2)      --------->ARR11(3)  <---------YAB1      --------->YAB1         --------->ARR14(2)<---   aacgcttatgtgagtgaatatgttgataaatgattattttgatgagtacttaaagctatcatcattttatagtttttggaggttttgccaaaaactaaag  23538600                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                =====                                                                                   --------->ANAC46                                                                                   --------->ANAC58         <---------ARR11(3)                                                        --------->ANAC58 -         --------->ARR11(3)                                                      --------->ANAC58----         --------->AHL20(1)                                                      *TSS           <---- ------->GLK1(2)                                                                 --------->ANAC58<--- -------GLK1(2)                                                              <-----------HVH21  <---- -------ARR14(2)       ------------>CBF                                     --------->ANAC58    ----- ->MYB52(1)        --------->ALFIN1                                         <--------------OsCBT===== ------>ARR14(2)--------->DAG2                                              --------->ANAC46    ===== -->DOF2 <---------AHL20(1)                                                 --------->ANAC58  <------ ---ZmHOX2a(1) ---------->DOF2               ----------->GT1               --------->SPL7    <-------   gattctgaaaatatatcaaaagtggcccaatagaagcccattaagaccagttaaaacagagaaacgactctatatcgaacgtcacgcgcattactcgcgc  23538700 ------>ALFIN1 ----MYC3 --->MYC2 -----ANAC58 -----ANAC58 =========================================bZIP_DOF ---------->HVH21 --->MYC3 -----TGA1a                        <----------DOF2 ----MYC2                 <---------At4g35610 -----ANAC46              --------->At4g35610    <---------WRKY18(1) ---->TGA1a          <---------ANAC58           --------->WRKY45 ======================bZIP_DOF<----------DOF2  --------->WRKY12                                   -- =============================================bZIP_DOF                               <------NtERF2 -- ---ANAC46           <---------ANAC58           --------->WRKY38(1)                 ------>NtERF2  <- --LBD16    <----------DOF2<---------GLK1(2)------>ZmHOX2a(1)    <---------GLK1(1) <----------ID1 <--   gtgtgaccaagtccctttctcttgcttcagcttctttctttccttcctcgttgactgcttcttctgcatttcccagtgagaaatggcgacgaaggaacca  23538800                                                                                                    -                                                                                                 <---                                                                                                -----               --------->ANAC58                                                                <----- ------->ARR14(2)                                                                              <----- ------->GLK1(2)                                                                              ------- --------ARR14(2)                                                                             <------ -------GLK1(2)--------->ANAC58                             <---------ATHB12 --------->YAB1   -------   gaatctgtttacgagttaagcatcgaggtgaatacatttctctaacttgagtcatcgattcaataactctctctgtctctgataacttgaatgtgagatc  23538900           --------->ANAC58     ---------->DOF2 ---------->GT1                                                                 --------->LBD16 -------DOF2                                                     <---------ANAC58 ->ZmHOX2a(2)                                                    <---------ANAC46 -ZmHOX2a(2)                                                     <---------ANAC58     ---------->DOF2 ----RVE1(1)     <----------DOF2                           <---------TOE1(3)   --------->HSFB2a(2) -->AGP1   --------->ANAC58                                <---------TOE2(3)   <---------HSFB2a(2) ---ARR11(3)  ------->TEIL                             <----------DOF2        <---------LBD16 -->ARR11(3) <---------ALFIN1      <---------TOE2(3)<-----------GT1       <----------DOF2    --------   ttttgttaaaaggaagcacctttgatataagggttctaagaatgtgaagagtttttactttaaggtgtcttgtaggcttttccggatgaaaaggaatgtc  23539000                                                                                                -----                                                                                             <-------                                                                                           --------->ATHB12                                                                                          --------->ICU4                                                                                          <---------YAB1                                                                <---------DAG2          --------->YAB1                                                                <----------DOF2        <------ZmHOX2a(2)                                                               <---------ANAC58       <---------ARR11(3)                                           --------->LBD16     <---------ANAC58       --------->ARR11(3)                                       <---------ARR14(2) ====================================HOX2a_HOX2a     <---------AHL20(2)           <-------GAMYB           <------ZmHOX2a(1)        --------->YAB1<---  --------->AHL20(2)             <-----------RAV1(1)     <---------YAB1           <---------ATHB12 --->GT1              --------->ATHB12<---------CCA1(2) <---------TOE2(3)       --------->WOX13(1)  <   aaatttttatattgtctgaaggaacgatttgtcttctgttgtatcccgatgtttagtttaggattgcttttctcagtagaatcaatcagatcatgatgga  23539100                                                             <---------ANAC46                                                        --------->ATHB12                     <------MYB46(1)                  <---------WOX13(1)                   <---------WOX13(1)               --------->ATHB12                 --------->ATHB12                <----------DOF2                 <---------MYB46(3)             ------>ZmHOX2a(2)      <----------DOF2<------MYB83              <---------YAB1<---------ANAC58 ---->ARR11(3)  <---------YAB1                --------->ARR11(3)         <---------At4g35610 --WOX13(1)  <-----------RAV1(1)              <---------ARR11(3)         --------->At4g35610 ---ZmHOX2a(2) <---------MYB52(1)<---------GLK1(2) <---------YAB1<-----------RAV1(1)               -- ---------YAB1<-------GAMYB----------->HVH21 --------->YAB1  <---------ANAC58    <----------DOF2 ----   tcatgtttctttcttctgttgattggtctctcacagattgttttctatgatctttgattgatttcttgtgttggcctctgagtctttatcttgttcttcc  23539200  Previous    Next  AGI:  At1g63450.1    Description:  catalytic. similar to exostosin family protein [Arabidopsis thaliana] (TAIR:AT5G41250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62810.1); contains InterPro domain Exostosin-like; (InterPro:IPR004263) Range:  from: 23535074    to: 23538234    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g63460.1    Description:  glutathione peroxidase, putative. Identical to Probable glutathione peroxidase 8 (GPX8) [Arabidopsis Thaliana] (GB:Q8LBU2;GB:Q9SH32); similar to ATGPX6 (GLUTATHIONE PEROXIDASE 6), glutathione peroxidase [Arabidopsis thaliana] (TAIR:AT4G11600.1); similar to Chain A, Crystal Structure Of The Poplar Glutathione Peroxidase 5 In The Reduced Form (GB:2P5Q); contains InterPro domain Glutathione peroxidase; (InterPro:IPR000889); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 23538681    to: 23540132    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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