Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ATHB12                                                  --------->YAB1      <---------WOX13(1)                                             <---------REM1(1)     <---------ANAC58                                        --------->AHL20(2)     <---------AtLEC2                                        <---------AHL20(1)     <---------ANAC58                                        --------->AHL20(1) ---->ZmHOX2a(1)                          ----------->GT1    <---------AHL20(2)                    -- ->ZmHOX2a(1)                     <---------YAB1            --------->AHL20(2)              ---------   cctatttgcttgatttgctcgatttgctcatctattttgatataagtttaaaatttgaacaattttatttgatgaagcatagtggattaaaaaaccatag  23519100                                                                      --------->AHL20(2)                                                                    <---------------AGL15                                                     <---------------AGL15                                                     --------------->AGL15                                                    <-----------------AGL1                                                    <-----------------AGL2                                                    ================================MADS_MADS                                                    ----------------->AGL2                                                    ----------------->AGL3        ---------->DOF2                             <-----------------AGL3                    ------- --------->ARR11(3)                           <----------DOF2       <----------DOF2          <------- <---------ARR11(3)                        <-----------GT1          --------------->AGL15  --------->YAB1 --------->ARR10                       <----------DOF2           --------->ANAC58         <---------YAB1 >TOE2(3) <----------ID1         <---------GLK1(1)<-----------GT1--------->ANAC58      <---------YAB1   tgagatacttgaaagacaaaaaaacacttccatcgaaatcccttttaacttttatccacatatggccacgctttaaatagtagtactatatgattatcat  23519200                                                 <------------CBF        --------->WRKY45                         --------->ANAC55(2) --------->ANAC55(2)         --------->WRKY38(1)            --------->AHL20(1)               <---------ANAC55(2)     --------->DAG2            --------->AHL20(2)             --------->MYB52(1)       ---------->DOF2      ----------->GT1    <---------ANAC55(2)<---------TOE2(3)   <---------ZAT6 -->YAB1    <---------AHL20(2)           <---------MYB52(2)   ----------->GT1     --------->AHL20(2) --YAB1    --------->AHL20(2)         --------->AHL20(2)   <------ZmHOX2a(2)  ----------->GT1--------   atgttgaacagaaaaaaattattctatacgtataatctatgtaaataacgtaattgaaacgatcgagtgataaagttgactagtttaaatttccgaattc  23519300                                       <-----------HVH21     <---------ICU4  <---------O2                                  ------------>CBF<---------TGA1a            =======================bZIP_DOF                                  <---------YAB1  ==================================================bZIP_DOF                                 --------->TOE2(3)--------->O2               --------->TGA1a                                --------->YAB1    --------->TGA1a            <---------TGA1a                               <---------YAB1     <---------O2               --------->O2<----------DOF2                         <---------ZAT18     ----------->HVH21               --------->ANAC46    <---                         --------->ZAT14 <---------ANAC58   <---------YAB1--------->TOE2(2)      <---                         --------->ZAT18 <---------ANAC46   <---------ATHB12 =======================bZIP_DOF ->GLK1(1)               <---------ZAT14 <---------ANAC58------>ZmHOX2a(1)--------->TOE1(2)   <------   caaagtatatactagtagcaaaacaagtccactatcatcaatgtcgtgtgactcgtgtcctcatcattctctcaaacccacgaggcattttcttttctac  23519400          <---------DAG2     ------>ZmHOX2a(1)                                            --------->HSFB2a(2)    --------->TOE2(3)                                             <---------HSFB2a(2) ---------->DOF2 <-----------GT1                                       <---------ALFIN1            <-----------HVH21 -------DOF2                                        --------->ANAC46 <---------ARR11(3) ------DAG2                           ---------->DOF2 <---------ALFIN1--------->GLK1(1) -----GT1 --------->TOE2(3)    --------->AHL20(2)  --------->ANAC46  --------->ARR11(3)        ------   ttttttcctcaacctttttaagttcaaaaaaaaaaaaatagaaagagaaaccccccccaacttgttttcgagatatcaacaaaaatgtcaaagacaaaaa  23519500                                       <---------ANAC58                                       <---------ANAC55(2)                                       --------->TGA2(1)                                       --------->TGA1a                                       <---------TGA2(1)                                       --------->O2                                       <---------O2                                       <---------TGA1a                                       <---------bZIP60(2)                                       <---------ANAC58                                       <---------bZIP60(1)                                          <                                       --------->bZIP60(1)                                      <----                   ----------->GT1    ----------->STF1                                ===============                 ---------->DOF2     <---------TGA2(2)                                <----------DOF2                 ================================bZIP_DOF                             --------->TOE2(3)               --------->ANAC46     ----------->TGA1                                  --------->TOE1(3)               --------->ANAC58     ----------->HVH21                               ------>MYB46(1)<-      --------->YAB1        <---------ICU4                                  <---------CCA1(2)   -----   --------->TOE2(3)        --------->YAB1                    <---------At4g35610   ------>MYB83===== --->AHL20(2)  --------->ANAC58--------->MYB52(1)             <---------ZAT18  <-----------GT1 <-----   aattcccttaataatccaagaaagaaaaaatcataacgatgacgtctctattctctaaacctagagctctcacttctcatatcaccaactttaaaactta  23519600                                                                      <---------RAP2.6(3)                                                                      <-----------TGA1                                                                      ------>NtERF2                                                                     --------->ANAC46                               --------->DOF5.7(2)                   --------->bZIP60(1)                              --------->TOE1(3)                      <---------ATERF1(2)                              <----------DOF2                        <---------bZIP60(1)                              --------->TOE2(3)               <---------MYB52(1)                      ------->PIF5                           --------->LBD16                      ------->MYC4                          --------->ATERF1(2)                      ------->MYC3                         <------NtERF2                      <-------MYC3                        <---------ATERF1(1)                      <-------MYC2                        ------>NtERF2<---------MYB52(1)                      ------->MYC2                        --------->ABI4(1)                      <-------PIF5                       --------->RAP2.3(2)                     >>>>>>>>>>HY5                       <---------ATERF1(2)                     <---------PIF3(3)                   --------->ATERF1(2)                     <---------O2<---------DOF5.7(2)     <---------DEAR3(1)    <---------MYB52(1)<-------MYC4<---------TOE2(3)      --------->DEAR3(1)   --------->LBD16   <---------TGA1a                     --------->RAP2.3(3) --------->SPL7      --------->ANAC46                   --------->ERF1<-----------HVH21 ---------MYB52(1)   --------->PIF3(3)                  --------->DEAR4(2) -----At5g28300      ====================bZIP_DOF       --------->RAP2.3(1)                        >> ==============================bZIP_DOF                 --------->ATERF1(1)                      ---- --------SPL7        --------->TGA1a                    --------->ORA47(2)               <----------- --->P               --------->O2<-----------GT1       <---------ATERF1(1)     ------>ZmHOX2a(1)----- ==============================MYC_MYB               --------->MYB46(3)<------NtERF2    <---------ANAC58 ------GT1         <---------ALFIN1               ------>ZmHOX2a(1)  --------->ATERF1(2)<---------ANAC58   ccgtccggttatcggaaaactccacgtggcaactttaacgcttcttctcttcctaatcgccgccggtattgccgtcacttcctctctatggcttaacaag  23519700                                         --------->YAB1                                         <---------ICU4                                        --------->ICU4                                        <---------YAB1            --------->ATHB51                                      --------->YAB1              <---------ICU4   <---------ICU4               --------->ZAT6                    -------->ATHB1  <---------ATHB12              --------->ANAC46                  --------->ATHB12 >>>>>>>GT-1                 --------->ZAT14                     <---------ATHB51          ---------- ----->At5g28300      <-------TEIL   <---------YAB1        <----------DOF2            <----------ID1 ----AGL15  <-----------GT1  --------->ZAT18          --------->YAB1             ---------->DOF2 ------>GT1 --------->ZAT6   <---------ZAT18     <---------YAB1  --------->ICU4<---------YAB1   gtaaatcattcttttcactatatatacatagttcacactatcatgataactattattcatactttgaattattgtttgtttatcaaagacgacaaaagca  23519800                                               ------>NtERF2                                              <---------ALFIN1            --------->ICU4                    --------->DEAR3(1)        ----------->RAV1(1)                  --------->MYB46(3)        <---------DDF1                --------->ZAT2        --------->LBD16       --------->At1g77200            <---------ZAT2      <---------LBD16       ------->GAMYB               --------->LBD16   --------->ANAC58       --------->DREB2C(2)     --------->ARR14(2)    --------->ANAC58                 <---------ANAC58   --------->ETT(2)<----------ID1<---------LBD16<------NtERF2                         <---------ANAC46   ------>ZmHOX2a(2)----------->RAV1(1)      <---------ABI4(2)              --------->ZAT18  -------- >DOF2--------->DEAR3(2)       <---------ARR14(2)--------->DEAR3(1) ----------->GT1   <---------ANAC58   tttgatcgaccgacattagtagcaacaaaaccagaaccggagctagagccaccgcatgaaaccggagtattggtaaattgcacaagtttcttgaatcaaa  23519900                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                         <---------WOX13(1)         <---------ANAC58                                                              --------->ATHB12         <---------ANAC58                                        <---------ICU4        <---------ICU4        <---------MYB46(3)                    <<<<<<<<<TBF1   --------->YAB1          --------->ICU4       --------->ARR14(2)                 --------->ICU4      <---------ICU4       <-------TEIL   ---      <---------MYB52(1)      <---------------AGL15          --------->ICU4<---------AHL20(1)    <--- <-----------HVH21   <---------ALFIN1----------->GT1         <---------YAB1--------->AHL20(1)    ---- ->YAB1<---------ARR14(2)     --------------->AGL15<----------DOF2    <---------MYB59 <---------YAB1   accggtccggttcttgctcaagaacacctctacttaacaaggtaattcttcttctttacttccatgattatgcctaatatatatgttcatgattgaaaaa  23520000  Previous    Next  AGI:  At1g63420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23850.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66409.1); contains InterPro domain Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); contains InterPro domain Lipopolysaccharide-modifying protein (InterPro:IPR006598) Range:  from: 23519539    to: 23522575    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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