Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <------NtERF2                                                         <---------ZAT2                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                        <---------DEAR3(2)                                                        --------->LBD16                                                       --------->DEAR3(1)                                                       <---------ATERF1(2)                                                       --------->ATERF1(2)                                                       --------->RAP2.3(3)                                                       --------->RAP2.3(2)                                                       --------->RAP2.6(2)                                                       <---------DEAR3(1)                                                      --------->ORA47(2)                                                      --------->RAP2.3(1)                                                      --------->DEAR4(2)                                                      --------->ATERF1(1)                                                      <------NtERF2                                                      <---------LBD16                                                     <---------RAP2.3(1)                                                     <---------ATERF1(1)                                                     ------>NtERF2                                                     --------->ABI4(1)                                                    --------->RRTF1(3)                                                    --------->RRTF1(2)                                                    <---------DEAR3(1)                                                    --------->DEAR3(1)                                                    --------->RAP2.3(2)                                                    --------->ATERF1(2)                                                    --------->RAP2.3(3)                                                    <---------ATERF1(2)                                                   --------->RAP2.3(1)                                                   --------->ERF1                                                   --------->DEAR4(2)                                                   --------->RRTF1(1)                                                   --------->ATERF1(1)                                                   --------->RAP2.6(1)                  --------->HSFB2a(2)              --------->ORA47(2)                  <---------HSFB2a(2)             --------->At4g35610             --------->HSFC1(2)                   <---------At4g35610          --------->LBD16                         <---------RAP2.3(1)        <---------LBD16                           --------->LBD16   --------->GLK1(1)                              ------>NtERF2                          <-----------ARR10   <---------GLK1(1)                        <---------GLK1(1)                            <---------ARR11(1)  --------->ARR11(3)                       <---------GLK1(2)---------->CDC5     --------->HSFB2a(2)  <---------ARR11(3)                  --------------------->WRI1                <---------HSFB2a(2) -----NtERF2 --------->HSFB2a(1)   <----------DOF2<---------ATERF1(1)    --------->TOE2(2) --------->YAB1 ------DEAR3(1)--------->GLK1(2)   <---------DAG2--------->ANAC46        ------->GAMYB  <---------ARR14(1) ------HVH21 <---------HSFC1(2) <---------ALFIN1<---------LBD16         --------->MYB46(3)<---------ATHB12   cggagatatcaccggagtttctagactcgactctccacttttttggattttccgccgccggctcagccctcacaacctccgtctcgaaccgaatcatctc  23497300                                                                       ------>ZmHOX2a(2)                                          --------->TOE2(3)           <---------GLK1(1)                                        ------->TEIL                  <------ZmHOX2a(2)                                       <---------ARR11(3)            --------->ARR11(3)                                       <---------GLK1(2)             <---------AGP1                            <---------TOE1(3)                        --------->ARR14(2)                        <----------DOF2<---------ARR14(2)            <---------ARR14(2)                  ---------->DOF2      --------->ARR14(2)    <---------ANAC58         <---------ANAC58               --------->ANAC46      --------->ANAC58        <---------ANAC58         <---------ANAC58               --------->ANAC58      --------->ANAC58  --------->LBD16--------->GLK1(1)               --------->ANAC58  --------->ANAC58    <---------LBD16 <---------ARR11(3)              ------>ZmHOX2a(1)  --------->ANAC58----------->HVH21  <---------CCA1(2)<---------LBD16   gtccatcttgaacttcctcgcaaagtctttcaggtatgcaagaacctctatatgacccggatgtcgtctcggatctctagacttgttttcgggtccagtc  23497400                                                                                           <---------WRKY12                                                                                           <---------WRKY38(1)                                                                                         <-----------HVH21                                                                                       <---------MYB46(3)                                                                                       <---------DEAR3(2)                                                                                      --------->ETT(1)                                                                                    <-----------HVH21                                                                                  <---------DEAR3(2)                                                                                  <---------MYB46(3)                                                                                 --------->ETT(1)                                                                               <-----------HVH21                                         <---------MYB46(3)                 <---------ANAC55(2)                                        <---------WOX13(1)                  <---------ANAC55(1)                                      --------->ATHB12                      --------->ANAC55(2)           ----------->GT1           --------->ICU4                         <---------ANAC46       <---------GLK1(1)             <---------YAB1                         <---------ANAC58       --------->GLK1(1)      <---------ANAC46                              <---------ANAC58      ---   ----------->GT1            <---------O2                                 <---------LBD16--------->WRKY18(1)   gaaaacgggaaatcagtgaaacccatgcattctcgtgggatgattgttcggagagaactatagaggctcgaatggattacgggtcgggtcgggtcaatgc  23497500                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                           --------->ATERF1(1)                                                                                           <------NtERF2                                                                                          --------->LBD16                                                                                         --------->ALFIN1                                    --------->ANAC58                                  <---------O2                                    --------->ANAC46     <-------MYC3                 --------->O2                                    --------->ANAC55(1)  ------->MYC2                 <---------TGA1a                                    --------->ANAC58    <---------TGA1a             --------->MYB52(1)                                  <---------ALFIN1      ======================MYC_MYB --------->ANAC46                                 <---------REM1(2)      --------->TGA1a             <---------ALFIN1                                <---------ALFIN1       <---------TOE1(2)          <xxxxxxxxxxxxxxxxxx                               --------->ZAT18     --------->PCF2            --------->ALFIN1--------                               <---------ZAT18  <------MYB46(1)       ===============================                        --------->ALFIN1        <------MYB83          ==========================MYC_MYB                      <---------ANAC46      <---------ARR14(2)     --------->MYB52(1) --------->TGA1a           <-------TEIL----------------------->TaNAC69(2)<-------MYC2 ------->GAMYB----------->HVH21      <-----------RAV1(2)--------->REM1(2)  --------->ARR14(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <-----------HVH21 <---------ANAC58  ------>NtERF2 <---------ALFIN1----------->RAV1(1)<---------DEAR3(1) ------->CDC5         <---------ANAC58 --------->DEAR3(1)------->MYC3--------->MYB46(3) <---------LBD16   taagcgggtcaggttcgacattaggcgtgtaagcccacacgcctccgatttggttcccacgttcgaaaacaacgacagagtggccctcacggcggagctc  23497600                                                   <---------bZIP60(2)                                                   <---------ANAC46                                                ----------->HVH21                                              <---------ANAC58                                              <---------ANAC46                                              <---------ANAC58                                           --------->ALFIN1                                  --------                   <---------ZAT2         ------->MYC3                                       --------                   <---------At4g35610    ------->MYC2                          --------->ICU4                   --------->At4g35610    <-------MYC3                        --------->TOE2(3)        <---------TGA1a                   ------->PIF5                        --------------->AGL15        <---------O2                      <-------MYC4                        <---------------AGL15   --------->RAP2.3(3)                    <-------PIF5                        --------->YAB1--------- <---------ZAT2   <---------ATERF1(1)     ------->MYC4                       <-----------------AGL2 <---------At4g35610                     <---------TGA1a           <---------At5g28300      <-------- --------->At4g35610                     <---------PIF3(3)     <---------ARR14(2)<--------HAHB4 --------->ZAT2 <---------At4g35610      <---------ANAC46      --------->ARR14(2)--------->ATHB51 --At4g35610    <---------ZAT2           --------->TGA1a   <------ZmHOX2a(1) <-----------------AGL3 ->At4g35610   <---------ATERF1(1)       <---------O2     <------MYB83 <---------ANAC46    <------ZmHOX2a(1) --ZAT2 --------->O2      <---------ALFIN1<-------MYC2   --------->MYB111(2) ----------------->AGL3 --GLK1(1)    <---------RAP2.6(2)        ========================MYC_MYB     ----------------->AGL1 ->GLK1(1)   <---------LBD16             --------->O2--------->ALFIN1 <---------At4g35610--------->MYB59 xxxsmallRNA(si3)<---------DEAR3(1)      --------->bZIP60(2)  <------ZmHOX2a(1) <---------YAB1 <----- ->ZAT2 --------->TGA1a  --------->ZAT2  --------->PIF3(3)<------MYB46(1)    ----------------->AGL2 =================MYC_MYB<---------ZAT2<---------ALFIN1 <--------P<-----------GT1<---------ICU4------   tcgagcagccacgagtccggctgctccagcaccgattactgccacgtggtgtgatgtggtaggaggatttactgctggtaccataattagttaggatatg  23497700                                                                                                  ===                                                                                                  ===                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              <------NtERF2                                                                                              <------                                                                                              -------                                      --------->DAG2                                          ------>NtERF2                                     ---------->DOF2                                         <-------                                  --------->YAB1                                             <------- ->CCA1(2)                       <---------YAB1                                           <---------ANAC46 ->GLK1(1)                  --------->ANAC55(2)                                       <------------CBF >ARR14(2)                  <---------ANAC55(2)                                  --------->bZIP60(1) -ARR14(2)             <---------AHL20(2)         --------->ARR11(3)             <---------bZIP60(1) ----ANAC55(2)         --------->AHL20(2)         <---------ARR11(1)        <---------At4g35610<----- --->ANAC55(2)  ----------->GT1  --------->ICU4  <---------CCA1(2)  <----------DOF2------------>CBF   taatgggatttttgtgtcatgttaattaatatgtgattataaagtgttttcaaatctttggtcatatagactttgtggagatgatgtcaattgggcggac  23497800 ---------->DOF2 =============================RAV ===========================RAV -------->RAV1(1)                   <---------YAB1 ----->MYB46(3)               --------->AHL20(2) ------------->AGL3     ------>ZmHOX2a(2) --->PCF5             <---------ARR14(2) --->ARR14(2)         --------->ARR14(2)<---------AHL20(2)                                        <-- --->PCF2         --------->ZAT2 <---------AHL20(2)                                               <-- ----ARR14(2)     <---------ZAT2 --------->AHL20(2)                                               --- --->TCP16(1)     ----------->RAV1(2)   --------->AHL20(2)                                        <-- ----TCP15(1)     <---------At4g35610  <---------YAB1                                             --- ---TCP16(2)      --------->At4g35610--------->YAB1          <---------At4g35610             -------- -->ATERF1(1)   <-----------RAV1(2)--------->AHL20(2)       ------->TEIL ------------>CBF    <------- --SPL7         <---------WRKY38(1)--------->AHL20(1)    <---------REM1(1)                   -------- --ATERF1(1)    <---------WRKY12 <---------AHL20(1)    --------->At4g35610          <-----------GT1 ----TCP20    <-----------HVH21  --------->AHL20(1)    <---------At4g35610 --------->WOX13(1)<-------   ccacaaagagaagaagggtcagctgatccccttaaaatattataaatttcatatttcagatgaagctaagacaccatcaatccattttcccagtctgcag  23497900                                                      ------>ZmHOX2a(1)                                                     --------->TOE2(3) -------ARR14(2)                                     --------->TOE1(3) -------ARR11(3)               --------->HSFB2a(2)--------->ARR11(3) ------>ARR11(3)               <---------HSFB2a(2)--------->ARR14(2)            <---------LBD16 ---------ARR10              -------->P           <---------ARR11(3)        --------->ZAT14 ------>ARR14(2)          <---------ANAC58        <---------ARR14(2)     ------------>CBF ->At4g35610              <---------ANAC58   ------------>CBF           --------->YAB1--------->At4g35610 --ZAT14                 --------->ZAT2 <---------AHL20(1)           ------>ZmHOX2a(1)<---------At4g35610 ->ZAT14           <-----------GT1      --------->AHL20(2)      <---------GLK1(1)  --------->LBD16 --At4g35610     <-----------GT1        <---------AHL20(2)      --------->GLK1(1)<---------LBD16    -   tatcttatggtatgcctattttcaccctgcttaccagaacaaaaaatttcaatatcctcaaatttgatatcctatcacaatactcgggagatgacttatt  23498000                              <---------MYB52(2)                             --------->ANAC55(1)                             ----------->GT1                             --------->ANAC55(2)                             <---------ANAC55(2)                             --------->ANAC46                      ----------->RAV1(2)                      --------->At4g35610          ----------->GT1                      <---------At4g35610         --------->ANAC58                  <-----------HVH21       <---------ARR11(3)         ------>ZmHOX2a(1)   --------->ANAC58     --------->ANAC58        <---------ANAC46    <------     --------->ARR14(2)      --------->ANAC58   <---------AtLEC2          --------->ETT(1) <---------     <---------ARR14(2) ----------->HVH21 --------->ARR11(3)           <-----------RAV1(1)<---------GLK1(2) ----->ZmHOX2a(1) <-----------TGA1      ----------->ARR10           --------->GLK1(2)    <---------At4g35610   tcctccaaatcctatagtttcgtcatctgacaagtaacaagtgagatattgcaaggaaacaaactctaatattctgtcggaaaattcagacagcttttca  23498100                                                                                        --------->ANAC58                                                                                      ---------->DOF2                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                           <---------WOX13(1)    <---------ZAT2    --                                                         --------->ATHB12        --------->ZAT2  ----                         --------->AHL20(2)    <---------GLK1(1)           --------->ATHB51      <---                     ----------->GT1          --------->ARR11(3)          <---------YAB1--------->ANAC58 ---YAB1         <-----------GT1    --------->REM1(1)   <---------YAB1  ============================= -DOF2    <-------TEIL   <---------AHL20(2)   <---------ARR11(3)        ------>ZmHOX2a(1)     -------   ttagaaaatagatgcaaaataactagtttaatttggcttcaacatgaagatttcacatatgattgagttgtttcctataattgagctgcaaagcaagtgg  23498200  Previous    Next  AGI:  At1g63340.1    Description:  flavin-containing monooxygenase-related / FMO-related. similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G62580.1); similar to FMO-like protein [Thellungiella halophila] (GB:ABJ98059.1); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Adrenodoxin reductase; (InterPro:IPR000759); contains InterPro domain HI0933-like protein (InterPro:IPR004792) Range:  from: 23495547    to: 23497684    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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