Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------YAB1                                                         --------->TOE1(2)    <---------TOE2(3)                     ---------->ID1                  --------->YAB1 --------->ICU4                -------->ATHB1                   ----------->GT1 ->ZmHOX2a(1)                  <---------ICU4               --------->YAB1--------->ATHB12 ->GLK1(2)                     --------->ATHB12          --------------->AGL15   <---------WOX13(1) -ARR14(2)     <------MYB83  <---------ARR11(3)     <---------KAN4(1) <---------AHL20(2) >AGP1 --------->CCA1(2) --------->YAB1<----------DOF2   <---------------AGL15 <------ZmHOX2a(1) -ARR11(3)     <------MYB46(1)<---------YAB1    <---------YAB1 --------->DAG2<---------TOE2(2) >ARR11(3)    --------->MYB111(1)      <---------DAG2 --------->GLK1(2)  <---------YAB1      -------- >ARR14(2)    <---------AtMYB61--------->YAB1------>ZmHOX2a(1)---------->DOF2<---------TOE1(2)   gtcattaagatttgatttggtggtatatcaaaatcattgtgcttttccttatgaataatctataaaaagtataaaatcataggattgatttttgttcatt  23452200                                                                                              -------                                                                                              -------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                     <------ZmHOX2a(1)                                                                                    <----------ID1                                                                                    ----------->GT1                                           --------->YAB1                          ----------->GT1  <        <-----------GT1                <---------ICU4                        <---------HSFB2a(2)    -   <---------AHL20(2)                 <---------YAB1                 <---------HSFB2a(2)   --------->CCA1(1) ->ATHB12         <---------YAB1    --------->YAB1                   --------->HSFB2a(2)   --------->RVE1(1)   agtatttttttttctatgtttttattcaatactagtattcatcattcataaaaaaaaaacataaaacagtgctagaagcctagaagaggaaaaaaatctt  23452300                                                                                  <---------AHL20(2)                                                                              <---------YAB1 --------->WOX13(1)    <---------AHL20(2)                                     --------->ICU4 -->TOE2(3)  <---------YAB1                                                 --------->YAB1 -->YAB1  <---------AHL20(2)                                               <---------YAB1 >ARR11(3)--------->AHL20(2)                    --------->CCA1(2)         <---------ARR11(3) -ARR11(3)--------->AHL20(1)                   --------->ARR11(3)         --------->ARR11(3) >GLK1(2)--------->AHL20(2)                    <---------ARR11(3) --------->At5g28300      --------->ICU4 ---------AHL20(2)    --------->AHL20(2)   ---------->DOF2       ----------->GT1  --------->AHL20(2) -------->AHL20(2)    <---------AHL20(2)  <------ZmHOX2a(1)   <------ZmHOX2a(1)<---------ICU4   aataaatcaaattttattaatagattaatttgtaagtctcattaggaaagatataacatctgtaggactgtaacaatatcataattttttgaaattatca  23452400                               --------->At4g35610                                         <---------At4g35610                        <---------AHL20(2)                                                 --------->ZAT2                        --------->AHL20(2)                                                 --------->At4g35610                       --------->YAB1                                               ---------->DOF2                    -------->ATHB1                                                <------ZmHOX2a(1)                    <---------ICU4                                              <---------TOE1(3)                   --------->AHL20(2)                                     --------------->AGL15                   --------->ICU4                                      --------->ZAT6      <---------ZAT2                   <---------ATHB51                      ------>MYB83 --------->ZAT14   ---------->DOF2                   <---------AHL20(2)                    ------>MYB46(1)  <---------------AGL15<-----       ---------->DOF2<---------YAB1             ---------->DOF2<-----------GT1 <---------TOE2(3)   agtttgacacaaagttttgaaattattaaaatcatctaactaagttttcaacaaagaccaactatttttcattacactaattaaggaaaagaaagctggc  23452500                        --------->ANAC58                        --------->ANAC58                        --------->ANAC46                       <-------MYC2                       ------->MYC2                       <-------PIF5                       ------->MYC3                       <-------MYC3                      <---------ALFIN1                      --------->ANAC58                      --------->ANAC58                      --------->ANAC46                    <---------ALFIN1                   --------->RAP2.3(3)                   --------->DEAR3(1)                  <------NtERF2                 ------>NtERF2                 <---------ATERF1(1)                --------->ANAC58                --------->ANAC58               ------->MYC3               <-------MYC2               ------->MYC2               <-------MYC3              --------->ANAC46                                     <---------ANAC46              --------->ANAC58                                     <---------ANAC58       --------->MYB111(1)                                         <---------ANAC58       <---------MYB46(3)                                 --------->YAB1       --------->MYB46(2)   --------->ZAT14          <---------AHL20(2)       --------->MYB52(2)   <---------ZAT14          <---------AHL20(1)     <---------MYB52(1)------->PIF5                  --------->AHL20(1)    ------------>MYB.PH3(2) ---------->DOF2         --------->AHL20(2)    <-------GAMYB--------->PCF2                     --------->YAB1---------->ID1    *TSS         ---- -NtERF2      --------->ANAC58          ------>ZmHOX2a(1)<-------TEIL            <------ZmHOX2a(2)   actgagcgttagttacacgcgcccacgcgctacagcgatgtcctaaattccccattatattcatatttgtcgtgctcaaaacgatcgaacaaatcagaca  23452600                             <---------ARR14(2)                             --------->ARR14(2)                             ------->TEIL                            <---------CCA1(2)                        <------ZmHOX2a(2)                        <---------At4g35610                 ----------->GT1        <---------CCA1(2)------>ZmHOX2a(2)           <------ZmHOX2a(2)    --------->ANAC58    --------->At4g35610         <---------ARR11(3)    --------->ANAC58   <---------ARR14(2)           --------->ARR11(3)     --------->AHL20(2) ------>DOF2           --------->ARR14(2)       ---------->DOF2   <----------ID1          <---------GLK1(1)   aaagcctcgcatctctctctcttgggatctgaatcttcaaattgaaaacaaaaagatcacaagagaaaaaaacaaaaaaaaatgcctcatggaactcttg  23452700                                    --------->ARR11(3)                                    --------->ARR14(2)                                    <---------ARR11(3)                                    <---------ARR14(2)                                    <---------GLK1(2)                        <---------HSFB2a(2)                 ---------->DOF2  ----------->ARR10              ------>NtERF2       <---------TOE2(2)                                             -----            <---------At4g35610--------->ANAC58                <-----------GT1    <----------DOF2----            <------NtERF2    <------ZmHOX2a(1)           <------ZmHOX2a(2)        <---------DAG2-----            --------->At4g35610--------->ANAC58    <----------DOF2                --------------->AGL15        <-----------HVH21    ===================================HOX2a_HOX2a       <---------------AGL15     <---------ANAC58<---------ARR11(3)          --------->At4g35610       --------->GLK1(2)---------     <---------ANAC58--------->ARR11(3)          <---------At4g35610   --------->YAB1       <--------   aagttgttcttgtcagcgccaaaggtctcgaggacgcagattttctgagtaagctttcgatcatttttccccctaataatctaacttttttcagaaatcc  23452800                                                                <---------------AtSPL3                                                                <---------------AtSPL8                                                  --------->TOE1(2)                                                  --------->TOE2(2)        --------->AHL20(2)                                                --------->ARR11(3)   --------->ANAC55(2)                                                <---------ARR14(2)   <---------ANAC58 ---->TOE2(3)       --------->ATHB12            --------->ARR14(2)   <---------ANAC58      <---------LBD16 -->ZmHOX2a(1)   <-------GAMYB                  <---------ARR11(3)  ------->TEIL        <---------DAG2 ---->TOE1(3)   <---------ANAC46                --------->GLK1(2)   <-------TEIL     <-----------GT1 >GLK1(1)       <---------ANAC58           ----------->GT1      --------------->AtSPL8  <----------DOF2 -GLK1(1)       <---------ANAC58        --------->ALFIN1    ------->TEIL   <---------AHL20(2)   <----   ttagaacccatttgagtttcgttgatgggtattgtccaaaatgtgttgaaaatctgcgaatgtatatatgtacgtgtttaaatgttttgacttttcggat  23452900                                               <---------ANAC46                                           --------->GLK1(1)                                    <------ZmHOX2a(2)                                   --------->ARR14(2)         --------->GLK1(2)         <---------ARR11(3)                                    <---------YAB1     <-----------GT1               <---------ARR14(2)                                <---------ARR14(2)   --------->CCA1(2)               --------->ARR11(3)                                <---------GLK1(2)  --------->ARR11(3)           <<<<<<<ZML2 <---------ARR14(2)                        --------->ARR14(2)  <---------ARR11(3)    --------->WRKY38(1)<---------GLK1(1)                    ------->TEIL --ZmHOX2a(2)     <-----------RAV1(1)------>ZmHOX2a(2)     --------->TOE2(2) <---------YAB1   caaagatttacaatctgtgaatgttgttgactagaacgatctgagaattctgtgtgtgtaacatatgagaattcatcttatgaatcggattttgattcac  23453000                        --------->AHL20(1)                        --------->ARR11(3)                        <---------ARR11(3)                        <---------AHL20(1)                      --------->AHL20(1)                      <---------AHL20(1)                   --------->AHL20(2)                ------>ZmHOX2a(2)                                               --------->ARR11(3)               <------ZmHOX2a(2)                                                >>>>>>>>>>GT-1              <---------AGP1              <---------HSFB2a(2)                 <---------YAB1              <---------ARR11(3)          --------->HSFB2a(2)<-------TEIL  <---------YAB1        <---              --------->AGP1  <---------AHL20(2)      --------->YAB1     --------->YAB1 <---------YAB1              --------->ARR11(3)      <----------DOF2<---------YAB1<-------TEIL--------->YAB1   <----        <---------YAB1<---------AHL20(2)  <---------TOE2(3)<---------GLK1(2)--------->YAB1 <---------WOX13(1)   aactgatattagtatagatcttaaaatattttttaatcggttttatggaagtttgatcatagattcacattcgttttataatgatatagtctaattgatg  23453100  Previous    Next  AGI:  At1g63220.1    Description:  C2 domain-containing protein. Identical to C2 domain-containing protein At1g63220 [Arabidopsis Thaliana] (GB:Q9C8S6;GB:Q8LDR6); similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G55470.2); similar to unknown [Populus trichocarpa] (GB:ABK94300.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 23452584    to: 23454117    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version