Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------AHL20(2)                                    --------->AHL20(1)                                   --------->ATHB51                                   --------->AHL20(2)               <----------DOF2                                   <---------AHL20(2)              <---------ANAC58                            >>>>>>>>>MYB1            --------->AHL20(2)                            >>>>>>>>>MYB2            --------->AHL20(1)                           --------->MYB52(1)        <---------AHL20(1)                          ------>ZmHOX2a(1)          <---------AHL20(2) >TOE1(3)                <---------MYB59 <-----------GT1           <---------ANAC58          <------- >TOE2(3)           ------>ZmHOX2a(1)<---------YAB1 --------->AHL20(2)  ----------->GT1    <---------   gaagcctgaaaatgaagtaatcctattcctaactgaattattttaactattgaaataaatttcaagtttgctttgggtaaaatacttagccaacttttat  23442900                                                                    <---------YAB1                        --------->ANAC46                        <---------YAB1                     --------->ARR14(2)                      --------->AHL20(2)                     --------->ZAT14                         <---------AHL20(1)     --------->ARR11(3) --YAB1       <----------DOF2           <---------AHL20(2)   <---------AHL20(2)     <---------ARR11(3) -DOF2 --------->TOE2(3)<-----------GT1 <---------YAB1<-----------GT1    <-----------GT1        >>>>>   tgattttttcattaaactttaagtatacaccatttgtttcatattattgtatgttttagccattttatttttgattcacaatataagatgttttgaagaa  23443000                                   <----------DOF2                           --------->AHL20(2)                       --------->AHL20(1)                        <----------DOF2                       <---------AHL20(1)                        <---------DAG2                       --------->AHL20(2)                    --------->ZAT14                       <---------AHL20(2)       --------->AHL20(2)    --------->ATHB12              <                      <---------AHL20(2)        <---------AHL20(2)   <---------YAB1                --                  --------->ICU4<---------ARR11(3)      --------->ZAT14                        ------ --------->ARR11(3)   --------->AHL20(2)      <-----------TBP<---------ZAT14          <----------DOF2 >>>>>GT-3b  --------->AtLEC2   --------->ARR11(3)      <---------ZAT14<------------CBF     ---------   aaatatcaagttgctatgcaaaaattaaatttaagaactttagtgactatttatattctgcagtaaactttttcattggccaaattttctttaactaaat  23443100                                                                                <---------MYB52(1)                                                                               <-----------HVH21                                                                               --------->LBD16                                                                              <---------ANAC46                                                                              <---------ANAC55(2)                                                                              <---------ANAC58                                                                             ------>ZmHOX2a(2)                                                                             ==============HOX2a_HOX2a                                                                     --------->ARR11(3)             <     <---------TOE2(3)                                               <---------ARR11(3)          ----   <---------AHL20(2)                                              --------->ANAC58       --------->ALFIN1 ---------AHL20(2)                                            --------->ANAC58--------->ANAC55(2)<--- ------->AHL20(2)                                             --------->ANAC46<---------ANAC55(1)<--- --->ICU4                 ----------->TBP                     --------->ANAC58<---------ANAC58  <---- >AHL20(2)        ----------->GT1              <---------TOE2(3)   --------->ANAC58 <------ZmHOX2a(1)   attaaataatgtttttaatatagaaaatataaaaacaaaactagaaattagggttcttcaacacaaggcaagaacttgatccgtgaggagcgatggggga  23443200                                           <-----------TBP                                         <---------ANAC46                                       <---------ANAC58                                       <------MYB83                                       <---------ANAC46                                        <-----                                       <---------ANAC58                                       -------                                       <------MYB46(1)                                        -------                                 <---------TOE1(3)                                            -------                                 <---------TOE2(3)                                           ========                             <----------DOF2                                                 <------- <-----------TBP            <---------ANAC58      ------------>CBF                           <------- -------TEIL       ------------>CBF   --------->MYB111(1)                         <---------ANAC58 ------->GT1     <---------ARR14(2)   <---------MYB46(3)                          <---------ANAC58  - ---MYB83<---------DEAR3(1) <---------ANAC58    ----------->GT1      ----------->HVH21      <-------- ---MYB46(1)     --------->GLK1(2)    <---------AtMYB61    <---------ANAC46  --------->ARR14(2)<----- -----AtMYB61    --------->ARR14(2)   --------->MYB46(2) <---------ANAC46<---------LBD16 <-----------RAV1(2)   ggttcatatagacggtgcgaatccaattttgctttagggtttggtgtatatagtcaattttgtgtatagccctgactcggataagcttgtctcaggtagg  23443300                   ------->TEIL                   --------->ARR14(2)                   <---------ARR14(2)            --------->O2            <---------ANAC46            <---------TGA1a            --------->TGA1a                  <---------ANAC46            <---------O2                   <---------ARR14(2)         ----------->HVH21              --------->MYB52(2)        --------->LBD16                <-------TEIL        ------>NtERF2               <------MYB83       <---------LBD16              <---------MYB46(3) -MYB46(1)  <---------ANAC58        <---------DEAR3(2) -->MYB59<------NtERF2              <------MYB46(1) -->MYB111(1) --------->ALFIN1      --------->MYB55(2)                       ----------->HVH21 -->MYB46(2)<---------bZIP60(2)    <---------AtMYB61                 <---------ARR14(2) =====================MYC_MYB     <--------P <---------ANAC58        --------->ARR14(2) -P   <---------LBD16        <---------TOE2(1)                      <----------TaMYB80 --MYB55(1) ===============================MYC_MYB                 ---------->TaMYB80 ----------->CBF  <---------CCA1(2)--------->MYB59             <---------LBD16 -MYB52(1)  <---------ANAC58 <---------ANAC46<---------ANAC58 ------>ZmHOX2a(1) -MYB83<---------ANAC46      <---------TOE1(1) ------>ZmHOX2a(1) --------->LBD16       ---------->DOF2   tctccaatgccgggacgtgtgtatctgtgttacgaggttggttcgtttcctgtgaatttgattcctccgcatatacgatgggacgagaagaaagagccta  23443400                                                          <<<<<<<<<TBF1                                                       <-------TEIL                                                      --------->ARR14(2)                           <---------YAB1           <---------HSFC1(2)   --------->ANAC46      --------->YAB1             --------->HSFB2a(1)   --------->ANAC58     --------->ICU4              --------->HSFC1(2)                 <----------DOF2   --------->ANAC58     <---------YAB1              <---------HSFB2a(1)             ---------->ID1   tgtacacgagacatgaagagtgtgttatgatgagaagacaagtgaagaagagcaaggttcttcttctccttgttgttcttgttcttgttctttttcaatt  23443500                             --------->ARR14(2)                                                   ---                             <---------GLK1(2)     <---------TOE1(3)                              ---                             <---------ARR14(2)    <---------TOE2(3)        --------->ARR14(2)   ----                          ---------->ID1    <---------AHL20(2)              <---------ARR14(2) <-----             <---------TOE2(3)              --------->AHL20(2)         --------->ANAC46       <------   catcacttcatttttgatgttgatttttgtcgattctctgtgttatataatttagggttttgacatcgatttcacacagtttcgctctgtgttcaattac  23443600                                                         <---------LBD16 ------>ZAT18                                        --------->AtMYB61 --->NtERF2                       <---------ARR14(2)--------->MYB46(3) ----->DEAR3(1)            ---------->DOF2  ----------->RAV1(1) ----At5g28300          <---------------AGL15  ------->GAMYB -----GT1               --------------->AGL15--------->At4g35610   cgccctgttgatttagacgatttagactataaagagtattctttggcaacagaaaccactacggagttactcaagaggctgtctcaaaactcccttaaga  23443700                                  <-----------RAV1(1)                                <----------DOF2                          <---------GLK1(2)                    <----------DOF2<------------------------ANAC81<---------At4g35610                  --------->At4g35610                             --------->At4g35610                  <---------At4g35610                        <-----------GT1               ----------   actacaattcagaattggtctgctttcaaattctctttgttgttgttttgatcaattttagttttacctgctgatgaaattgttttttttttgttgtgaa  23443800  Previous    Next  AGI:  At1g63206.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63190.1); contains InterPro domain Cystatin-related, plant (InterPro:IPR006525) Range:  from: 23443307    to: 23444596    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version