Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------At4g35610                                           <------NtERF2   <-------TEIL                                           --------->At4g35610               --------->ANAC58                     --------->YAB1    <-----------HVH21 <-------MYC2        --------->AtLEC2              <-------MYC3            --------->ANAC58   <-------MYC3        <---------ANAC55(2)              ------->MYC3            --------->ANAC58   ------->MYC2        --------->ANAC55(1)   <-      --------->ANAC58            --------->ANAC46 --------->ANAC58          --------->ANAC55(2)  <--      --------->ANAC58<---------AHL20(2) <---------WRKY12------->MYC3        --------->ANAC46     <--      --------->ANAC46--------->AHL20(2) <---------WRKY38(1)<---------AtLEC2 --------->ANAC58     --- >ANAC58   <---------ALFIN1       --------->ANAC58 --------->ANAC46     --------->YAB1            --- >ANAC58 ----------->RAV1(1)      --------->ANAC58 --------->ANAC58    <---------AHL20(2)   <------ZmHOX2a(1)   aaacaagaacgcaacacgttttataaaaatacttataagcaagtcagcgctacaagccatgtgcatagatgatataatcacgcaaaaccagtgaggacaa  23355400                                               --------->ANAC46       ------>MYB46(1)                       --------->ANAC58       ------>MYB83                          --------->ANAC46     <---------MYB59                         --------->ANAC58  <-----------GT1                         --------->ZAT14 --------AHL20(2)                       --------->ANAC46 -------AHL20(2)                      <-----------GT1 -------AHL20(1)                   <-----------GT1 ------>AHL20(2)             --------->At4g35610     ---------->DOF2                      --------->TOE2(3) ------>AHL20(1)             <---------At4g35610----------->RAV1(1)        ---------->DOF2<----------DOF2   tttaataccaaatcaaatcaaatccaaattcagcttatttctacttcacacaacacaaagcctcaagaacaagaacacaaagcttatttatactttaaaa  23355500                                                 <------ZmHOX2a(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                                --------->AGP1                                                --------->ARR14(2)                                                <---------ARR14(3)                                                <---------ARR14(2)         ------->TEIL                                               <---------GLK1(1)--------->AHL20(2)                                              ----------->ARR10--------->YAB1                                  --------->ANAC58           <---------AHL20(2)                                  --------->ANAC46           --------->AHL20(2)                                  --------->ANAC58------>ZmHOX2a(2)       <---------CCA1(2)     <----                                  <----------ID1--------->ARR14(3)--------->YAB1             ------>ZmHOX2a(1)                     <---------YAB1    ---------->DOF2     <---------AHL20(2)                ========                ---------->DOF2 ---------->DOF2--------->GLK1(1)--------->AHL20(1) ------>ZmHOX2a(1)<   ctcgtgcatttcaagtgaaaaagatgataaacaaataagccaaaagcagagatcttgatatataaaaataatacctgtatctatcctcgttcttcctagt  23355600                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            <---------ARR14(2)                            --------->ARR14(2)                            <---------ARR11(3)                            --------->ARR11(3)                            --------->ARR14(3)                           <---------ICU4                          ----------->ARR10                              --------->YAB1                      ------>ZmHOX2a(2)                                 <---------ATHB51                    <---------ARR11(3)                                  --------->AHL20(2)                    --------->ARR11(3)                                  --------->ICU4                    <---------ARR14(2)                                  <---------AHL20(2)                --------->At4g35610                                    <---------AHL20(1)           --------->ANAC46 <---------ARR14(3)                        --------->YAB1               -- -----ARR11(3)  <---------At4g35610                       --------->AHL20(2)                  ------- ============================HOX2a_HOX2a     <---------AHL20(2)     <---------AHL20(2)   --------->At4g35610 <<<<<<<<TBF1---------->DOF2--------->AGP1  --------->AHL20(2)      --------->AHL20(2)<------ZmHOX2a(2)   tcttcttcaatacacaaaagctgatcttgagatcttcttatacagattaaatctctgaaaaaaaatagattaaaataattacaaatagatcagaagacac  23355700                                                  <------ZmHOX2a(2)                                                 <---------AGP1                                       <---------AHL20(2)                                       --------->AHL20(2)<---------ZAT14                                    <---------AHL20(2)   *TSS------------>CBF                                   --------->AHL20(2)    <---------ZAT18                                  <---------YAB1 --------->ARR11(3)          --------->YAB1                                 --------->AHL20(2)      --------->ZAT14     ----------->GT1                                 --------->AHL20(1)------>ZmHOX2a(2)       <---------WOX13(1)          <---------TOE1(3)    --------->AHL20(2)<---------ARR11(3)       <------------CBF          <---------TOE2(3)    <---------AHL20(1)<---------ARR14(2)      --------->ATHB12      ------     <---------AtLEC2          --------->AHL20(1)--------->ARR14(2)     <---------YAB1         ------ ------->ZAT2    <---------ICU4<---------ARR11(3)--------->AGP1   --------->YAB1        --------->At4g35610 -->CCA1(2)----------->GT1 --------->ANAC46     <---------CCA1(2)<---------ATHB12 ---------->DOF2   gagcttagcatgaaggtaataaggcctacacaaaatattatataaatactagatcttagtggagtcaatgatatatgattgataaaaagaagcagccaag  23355800                                            --------->HSFB2a(1)                                            --------->HSFC1(2)                                            <---------HSFC1(2)                   --------->DAG2      <----------DOF2            ----------------->AGL1                         ---------->DOF2     <---------ANAC58            ------------>CBF                         --------->ANAC58     <---------ANAC58            ----------------->AG                     --------->ANAC46 --->ANAC58                    <-----------GT1                            --------->ANAC58  <-------- --->ANAC58          <------------CBF       <---------HSFB2a(1)           <----------ID1    <--------   acaagttgctttagtagtcacaaaattgtttttttgccaattcagaaaattccacaacttgaaaaacaaatgaaaaacgccaaaaagttttcaacttttt  23355900                          --------->GLK1(2)                         --------->ARR14(2)                          ----------->RAV1(1)                         <---------GLK1(2)                           ===========================RAV                         <---------ARR14(2)                         --------->MYB46(3)                       ----------->ARR10                         --------->YAB1              --------->YAB1                                   --------->ANAC58 --DOF2      <---------ATHB12               <----------DOF2    --------->ANAC58                 ----- -DAG2     --------->WOX13(1)     <----------DOF2<----------DOF2<---------ATHB12    ----------->RAV1(2)   ctaaaatggagttcaatcaaaaacctagattctcttcttttgtctactttcctttttattctcacaatcaacaacaaaaactcagtacctgaagagagaa  23356000                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                          <----------DOF2                                                                                          <---------DAG2                                                                                         --------->TOE2(3)                                                  --------->ANAC46                  --------->HSFC1(2)  --------->ZAT2                      XXXXXXXXXXXXXXXXXXXX>MIR827                   --------->HSFB2a(1)  <---------ZAT2       ---------->ID1 <---------At4g35610                           <---------HSFB2a(1) ---->GLK1(1)      <----------DOF2    --------->At4g35610 ------->TEIL        ---------->DOF2 <------   acccagttgcaaaaatcgcaactttgtcttcttgagatttagatgaccatcaacgtaatgagcctgaaataaacaaaaaaaaaagagccttcctttatga  23356100   --------->AHL20(2)                                             <---------CCA1(2)            ------ ---------AHL20(2)                                  <---------ATHB12                          ------- --------AHL20(2)      ---------->DOF2            --------->WOX13(1)                        --------- ------->AHL20(2) --------->MYB46(3)      <---------GLK1(2)   <----------DOF2          ----------->GT1 ---YAB1     --------->GLK1(2)        ---------->DOF2--------->YAB1------->TEIL  <------ZmHOX2a(1)   attaaataaacagagaatcaaacaccaaagatgggttttttaaagcttctctcaatcacaaaccctttgaatcttgtaagcgaggaaattggtaaaaagg  23356200                                           ------>ZmHOX2a(2)               ---------->DOF2  --------------------->WRI1                     --------->WOX13(1)   - ----->GT1   --------->YAB1    <---------ANAC58                       --------->ICU4               <- -->DAG2   --------->GLK1(2)   <---------ANAC58                       <---------YAB1              --- ->DOF2<------ZmHOX2a(1)       <---------ANAC46           <---------ANAC46   <---------YAB1       ---   tgaagaagaggagaatcaaaagacgactagtttgcttatagtagatcgcagactcttatcgcgagtaatgtgatcatttatcaatcgcatttactctcgg  23356300  Previous    Next  AGI:  At1g63010.1    Description:  SPX (SYG1/Pho81/XPR1) domain-containing protein. Identical to Uncharacterized membrane protein At1g63010 [Arabidopsis Thaliana] (GB:Q2V4F9;GB:Q94C80;GB:Q9CAP0;GB:Q9LQ03); similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G11810.1); similar to SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G22990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24466.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63492.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63654.1); contains InterPro domain SPX, N-terminal (InterPro:IPR004331); contains Range:  from: 23351382    to: 23355757    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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