Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------AHL20(2)                          --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(1)                     --------->AHL20(2)                                                 ----------->GT1                     <---------AHL20(1)                                                --------->DAG2               --------->ANAC46                                                  ----------->GT1               --------->ANAC58                                             <---------AHL20(2)               --------->ANAC58                            --------->ARR11(3)---------->DOF2     --------->YAB1  <---------AHL20(2)                ---------->DOF2  <---------------AGL15       - -----AHL20(2)--------->LBD16 ---------->DOF2 <-----------GT1        <---------YAB1   ---------->DOF2   ttttcaatgacatttccacgaaataaaatttataaagtcttcttatatttactgaataaaagttctacattatgctattaaaagtgtataaagtaacaac  23345700                                    --------->YAB1                                  <---------YAB1                                  --------->AHL20(2)            <-----------GT1       <---------AHL20(2)            --------->YAB1       --------->TOE2(3)                          --------->AHL20(2)         --------->YAB1        --------->AHL20(1)                           <---------AHL20(2)      --------->ANAC46         <---------AHL20(1)                       --------->YAB1      --------->ANAC55(2)   --------->AHL20(2)                         <---------YAB1      --------->YAB1        <---------AHL20(2)      <-----------GT1  <-----------GT1 -------->AHL20(2)         --------->YAB1    <---------AHL20(2)    <---------AHL20(2) --------->MYB52(1)   aaatttatacataataacaagttttcttataaaaatattaatagcatttttttttatccatagaactatttttatcatataattttaaaaacgggataac  23345800                                                                                              -------             <---------AHL20(2)                                                   --------->ZAT6           <<<<<<<<<MYB98                                                       <-----------GT1<-----         <---------YAB1                                                       <---------AHL20(2)        <---------TOE2(3)                     --------->YAB1         --------->YAB1          <-------      <---------AHL20(2)                    <---------TOE2(3)   --------->AHL20(2)<-----------GT1  <---------AHL20(2)<---------TOE2(3)     --------->ICU4 --------->TOE2(3)    --------->AHL20(2)   ttgtttattttatgttaaatttaagttaactagttgtataagtactaatgaaaacattttcttaaattcaataacaaaaatttatcactactccaattat  23345900                                                             --------->AtLEC2                                        <-----------GT1    --------->YAB1                                      --------->AHL20(2)  <-------TEIL                                --------->TOE2(3)     <---------AHL20(1)   <-------MYC3                <---------ANAC55(2)    --------->AHL20(1)   ------->MYC3           <---------bZIP60(1)         --------->ARR11(3) -->AHL20(2)              --------->bZIP60(1)         <---------ARR11(3)                <------------ ------GT1 <---------ANAC58    --------->At4g35610------>ZmHOX2a(1)                    --------->TOE2(3) --ATHB12  <---------ANAC58<-----------HVH21     --------->TOE2(3)            <-----------HVH21   ctacacatgttttgcttaatttttggtaatgtcacctaaatttaacaatttcctaaaatattcatgaaaaaaaactcatgggtcacaaatctcaaataag  23346000               ----------->GT1        <------MYB83        <---------MYB46(3)                    --------->LBD16        ----------->GT1                      --------->LBD16        <------MYB46(1)                <---------ANAC58                       --------->YAB1       <---------AtMYB61               <---------ANAC58                      ========================       --------->ALFIN1            <------------CBF               --------->ANAC58     <---------ANAC58             <---------ICU4                  --------->ANAC46     <---------ANAC58             --------->ATHB12        *TSS    --------->ANAC58    --------->MYB55(2)           <---------YAB1        ----------->GT1 <---------ALFIN1    <---------MYB46(3)          <---------GLK1(2)  <------------CBF  ----------->RAV1(1) ---AGL15    ---------->DOF2---------->DOF2 --------->LBD16  ---------->DOF2 <------ZmHOX2a(2)   aaacgatgggtggtcaaaagaaaaaaactaaaaagattattgcttccccgagaaattgggataaaaagaagcaacaccgatcacaacgtctccctatacc  23346100               <---------ALFIN1             <---------ALFIN1             --------->ANAC46         <------ZmHOX2a(2)         --------->CCA1(2)        --------->ARR11(3)                               ----------->RAV1(1)        --------->AGP1                                   --------->ORA47(1)       --------->ANAC58        --------->ARR14(2)          --------->LBD16     --------->DEAR4(1)        --------->ANAC46        <---------ARR14(2)          ------>NtERF2       --------->DREB2C(2)       --------->ANAC58       <---------At4g35610         <---------DEAR3(1)   <---------ETT(1)          --------->RAP2.6(2)       --------->At4g35610        <---------LBD16       --------->At1g77200  --------->At4g35610   ------>ZmHOX2a(1)        <---------ARR11(3)          --------->DEAR3(1)   <---------At4g35610<----   =============HOX2a_HOX2a --------->ARR11(3)      <------ZmHOX2a(2)    --------->ATHB12       -----   <-----------HVH21        <-----------GT1        <-----------HVH21     <---------MYB46(3) <-------TEIL =========HOX2a_HOX2a      <---------CCA1(2) <----------DOF2        --------->AHL20(2)--------->MYB52(1)   atctccttcagatccacacactctctcttatatctctccggcgaaaactttccgatcaccgacaaaaaaaaaaaatggttgcagacgcaaacggttcatc  23346200                                              <---------MYB46(3)                                              --------->MYB55(2)                                          <---------DEAR3(1)                                          <---------MYB46(3)                                      <--                                <---------LBD16         --------->At5g28300                       <--                            ---------->DOF2 <---------MYB52(1)                                   ----                          --------->At5g28300<---------AtMYB61                                  -----                       <---------LBD16    ------>ZmHOX2a(2)                --------->ANAC58     <----                 ------>ZmHOX2a(1)      <---------ARR14(2)            <---------At4g35610   <-------- -----ICU4       ================================HOX2a_HOX2a          --------->At4g35610   --------- ---->YAB1<-----------GT1----------->GT1--------->ARR14(2)--------->ZAT14  --------->ANAC58--------->MYB52(1)   atcaagctcatttaacttcctaatctacggtaaaaccggatggatcggtggtttactcggtaaactctgcgaagctcaaggaatcacttacacttacggc  23346300                                            <---------ANAC58                                            <---------ANAC46                                         --------->ARR14(2)                                 ------>NtERF2----------->HVH21  <---------WRKY12                                 ----------->RAV1(1)        <-------PIF5                                --------->RAP2.3(3)         ------->MYC3                                --------->DEAR4(1)          <-------MYC3                                --------->DREB2C(2)         ------->PIF5                              <---------ATERF1(1)           ------->MYC2                              ------>NtERF2 <---------ANAC55(2)  <---------WRKY38(1)                              <---------RAP2.3(1)           <-------MYC4                             --------->DEAR3(1)            <--------ABF1                             <---------DEAR3(1)            <---------O2                          ------>ZmHOX2a(2) <---------ANAC58<-------MYC2--------->ZAT2                     <---------ATHB12    --------->GLK1(2) --------->TGA1a             <---------ETT(2)                --------->TOE2(3)<---------DDF1            --------->ANAC55(2)   --------->MYB52(1)             <---------ARR11(3) --------->DEAR3(1)         <---------TGA1a      <-----------GT1 <---------MYB52(1)--------->WOX13(1)    <---------ARR14(2)--------->O2 --------->At4g35610 -------LBD16--------->ARR11(3) ----------->HVH21          <---------ANAC46    --------->ATERF1(1) ----NtERF2  <---------ARR14(2) --------->At1g77200      <------------OsbHLH66 ----------->HVH21   -- -->NtERF2   --------->ARR14(2)<------NtERF2----------->GT1<---------ANAC55(2)<-----------HVH21   <-- ---->ARR14(2) ------>ZmHOX2a(2)<---------ETT(1)       <-----------------PIF3(1)<---------WRKY38(1)<- -----ARR14(2)<------ZmHOX2a(2)--------->ATERF1(1)    ------>MYB46(1)   <---------At4g35610 ------>ZmHOX2a(1) -At5g28300  --------->ARR14(3)--------->ERF1--------->LBD16------->MYC4<---------ZAT2--------->SPL7 >RAP2.6(3)  <---------ARR14(3)--------->RAP2.3(1)    ------>MYB83  --------->ANAC46 <---------MYB52(1)   tccggtcgtcttcaagatcgtcaatcgatcgtcgccgacatcgaatccgtgaaacctagccacgtgttcaacgctgctggagtcaccggtcgtcctaatg  23346400          ------->TEIL          --------->ARR14(2)          <-----------ARR10                   --------->ANAC46          <---------ARR14(2)                 <------NtERF2          --------->GLK1(2)                  <---------LBD16          <---------ARR11(1)                <---------RAP2.3(1)         <---------CCA1(2)                  ------>NtERF2--------->ZAT6         <---------ARR14(1)                <---------DEAR3(1)      <---------------------WRI1         <-----------HVH21   <------MYB46(1)                      <-----------RAV1(1)   <------MYB83                       <---------ICU4--------->TOE1(3)  <---------MYB46(3)            <---------ANAC58 <---------ARR14(2) <---------WOX13(1)            <-------TEIL--------->ETT(2)      ------>NtERF2 ------->ATHB12              --------->ARR14(2)  --------->ARR14(2)             ---------->DOF2   --- -------YAB1                 <---------ARR14(2)--------->LBD16  ----------->HVH21            <------- --------MYB46(3)---------->DOF2<---------ANAC58<------NtERF2 <---------At4g35610   <------ZmHOX2a(1)   ttgattggtgcgaatctcacaaagttgagacgattcgtactaatgtcgccggaaccctaactctcgctgacatttgcagagagaaaggacttgttctgat  23346500                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                  <---------ICU4                                                                                 ====================HOX2a_HOX2a                                                                                 ====================                                                                                 ------>ZmHOX2a(1)             ----------->GT1                                              <---------ARR14(2)<--------            <--------P                                                    --------->ARR14(2)<--------        <---------ANAC46                                                 <------ZmHOX2a(1) --------->LBD16   --------->ANAC58                                                      ============================   <---------ANAC55(2)                                                   ============================HOX2a_HOX2a   --------->ANAC58                               <---------ANAC46    ===============================   --------->ANAC46                <-----------HVH21                  <------ZmHOX2a(1)  <---------LBD16 ------>WOX13(1)            --------->ATHB12    <-----------HVH21     ===============================HOX2a_HOX2a --YAB1<---------LBD16     <---------YAB1 ------>ZmHOX2a(1)         --------->ALFIN1   <-----------GT1   caattacgctacgggttgtatatttgagtatgattcgggtcatcctctcgggtcgggtattggattcaaggaggaggatactcctaatttcaccggatct  23346600  Previous    Next  AGI:  At1g63000.1    Description:  NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE). similar to RHM1/ROL1 (RHAMNOSE BIOSYNTHESIS1), UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic [Arabidopsis thaliana] (TAIR:AT1G78570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63647.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 23346058    to: 23347778    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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