Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->AHL20(2)                           <---------AHL20(2)                          --------->AHL20(2)                          --------->AHL20(1)                          <---------AHL20(1)                     <---------AHL20(2)                     --------->AHL20(2)            --------->YAB1                                   <                 --------->AHL20(2)              --------->ARR11(3)                          <-------                 <---------AHL20(2)            <---------ARR11(3)                           >>>>>>>>>              <--------HAHB4                   --------->ARR11(3)                           <<<<<<<<<              --------->YAB1          <----------DOF2                                       >>>>>>>>>              --------->ATHB51       <---------ANAC58 --------->YAB1                        ---------              <---------ICU4         <---------ANAC58<---------YAB1                         <--------             --------->AHL20(2)   ---------->ID1<---------GLK1(1)                           <<<<<<<<<             --------->ICU4<---------YAB1     <<<<<<<<<RAP2.2                              --------->DDF1       <---------AtLEC2--------->AHL20(2) <----------DOF2<---------GLK1(2)          <------ZmHOX2a(1)   ttgaaatttgaatgaataattaaaaaaatataatttgtagctttctttagatatcatcatattcttcaatagatttataagttttaggagaatgtcgaca  23334900                                                                 <---------ANAC46                                                                 <---------bZIP60(1)                                                                 ----------->GT1                                                              --------->ALFIN1                                                            <---------ANAC58                                                            <---------ANAC55(2)   ------>ZmHOX2a(1)                                        <---------ANAC55(1) ---------YAB1                                              --------->ANAC55(2) --DDF1                                                     <---------ANAC46 >bZIP23                                                    <---------ANAC58 <bZIP19             <---------ANAC46                       <---------O2 >bZIP19           <---------MYB46(3)               <---------ARR14(2) >ETT(2)         <---------ANAC58         <----------DOF2  <-------TEIL                          ---- -ETT(2)         <---------ANAC58<---------YAB1     --------->ARR14(2)                  --------->AHL20(2) <bZIP23        <---------MYB46(3)  <---------WOX13(1) --------->ANAC46              --------->YAB1   ttatcctagttcgaaaattggttgtggagaatagtctaattggtctttggtccgaatacgatacgtggtgtcaaaacatattccctctcataatataaca  23335000                                           ----------->GT1                                -----------                                     --------->AHL20(2)                            >>>>>>>>>>WRKY38                  <---------ICU4     <---------AHL20(2)                       <---------AHL20(2)       --------->ANAC58           --------->YAB1                             <---------AHL20(2)       --------->ANAC58      <---------ATHB12                                --------->AHL20(2) -----  ---------->DOF2--------->ICU4 <---------YAB1                      <----------DOF2>>>>>>>>>>WRKY43 ------>DOF2     <---------YAB1 <---------WOX13(1)                 <---------DAG2  >>>>>>>>>>WRKY26   aaagaaaagaagcaatctcattattctgccagtgattaataaatgaagtgatatgttatcaactagacaccttttgttataaatttgaccaaaacaaaaa  23335100                                                     --------->YAB1                                <-                                                  <---------ICU4                                 ----                                                 <---------AHL20(2)                              <---                                                 --------->AHL20(2)                             -----                                                 --------->ICU4                                 -----                                                 <---------ATHB51                               =====             --------->CCA1(2)                  <---------AHL20(1)                              -----            --------->AHL20(1)               --------->AHL20(2)                                 <----           --------->AHL20(2)                <---------AHL20(1)                             ---------       >>>>>>>>>>GT-3b              <---------MYB52(2)                       --------->AtMYB61 ------  ---------->DOF2            ----------->GT1 --------->AHL20(1)          --------->DEAR3(1) --------- ------------->ANAC81      ---------->DOF2   <---------AHL20(2)         --------->DEAR3(2) ------->TEIL ---->AHL20(2)      <---------ARR11(3)--------->MYB52(1)             <------NtERF2    --------->YAB1   aaatgaaagaaaaatatatgaagacattagaaagtaaaactaactaataaaataattagaatgcgaagggaggcacagaccaaaacaaacatgaacgcac  23335200     <---------ANAC58     <---------ANAC58     --------->ANAC55(2)     <---------ANAC55(2)  <---------MYB52(1) ------TEIL --->PIF5 ----PIF5                                                                                   <-------- ---->ANAC58                                                                            --------->ANAC46 ---->TGA1a                                                             <---------LBD16 --------->ANAC58 ===================================bZIP_DOF                    <----------DOF2   --------->AHL20(2) ---->ANAC58                                                   <---------DAG2     <---------AHL20(2)- -----TGA1a                                                 <-----------GT1      <---------AHL20(2) < >ANAC58                         <---------ZAT6            ---------->ID1        --------->AHL20(2)-- ->TEIL  <---------ANAC58   --------->YAB1                <-----------GT1 --------->LBD16>>>>>>>>>>>> >ANAC58 <---------ANAC58<----------DOF2  <---------O2 --------->AHL20(2)<---------LBD16--------->ANAC58   gtccattacttacttgttcatactcttctttcatagtgtttctcacgttgaaaccaattttttcgcctttcatttcagggaaatttttttaagccattgt  23335300                                                                         --------->ANAC58                                                                    --------->RAP2.3(3)                                                                   <------NtERF2                                                                   --------->ATERF1(1)                                                                  --------->ZAT18       <---------AHL20(2)                                         <---------ATERF1(1)     ----------->TBP                                              <---------ZAT18   --------->AHL20(2)                                             ------>NtERF2 ----CBF         ------>ZmHOX2a(2)                               --------->DEAR3(1) -------->YAB1  <------ZmHOX2a(2)        *TSS    ----------->GT1--------->ATERF1(1) ---------ICU4 <---------ARR11(3)       <----------DOF2        <---------ATERF1(1)     --------->ICU4 ------->ICU4  --------->AGP1          <---------ANAC58       <---------DEAR3(1)  ----------->GT1 >>>>>LFY      --------->ARR11(3)      <---------ANAC58 --------->YAB1   --------->ANAC58     <------ZmHOX2a(2)   attcattatatatatgagatcttatgcattagtaagacttggctttacagagagataataagagtaggcgccctcaagaaaacagagtaaaaatggatca  23335400                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                                 <---------------AtSPL3                                                                                 --------------->AtSPL3                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                         --------->SPL7                                                                        <---------PCF5                                                                       <------NtERF2                                                <---------ALFIN1       ----------->HVH21                                          --------->ATHB12            --------->LBD16                  ----------->GT1         --------->YAB1              ------>NtERF2             <----                <---------ANAC46         <---------ATHB12            <---------LBD16         --------            <-------PIF5                 --------->ICU4              <---------ANAC46--------->SPL7<-            ------->PIF5 <---------AHL20(2)  ------>ZmHOX2a(2)      <---------LBD16<---------SPL7  <-   aaatttgtatcgcaagtgcctggttattttatcgatgatggcaatgatcggcacatcaatggctacatatgccgggaccccatggcgtacagcctcagcc  23335500                       --------->ANAC58                      <---------At4g35610                      --------->At4g35610                      <------NtERF2                     <---------ATERF1(1)                    <---------DEAR3(1)                 <---------ATERF1(2)           --------->ANAC58           --------->bZIP60(1)           <---------TGA2(1)           --------->TGA2(1)           <---------bZIP60(1)           --------->ANAC58        ----------->HVH21        ----------->TGA1    <---------At5g28300--------->ANAC58   <-----------GT1<-----------HVH21          --------->ARR14(2) -----ALFIN1    <---------LBD16              <---------ARR14(2) ->ANAC46 ----------->STF1               <-------TEIL ---------DOF2 ------>NtERF2         --------->DAG2 --------DAG2 <---------ALFIN1      ---------->DOF2                                  <---------------   actttttacggtgacgacaccggcagcgcaactatgggtaaagtccatatacttctacattgtattgtatgtagaagtagaacacaaactatatatgact  23335600                                                        --------->YAB1                                                       <---------ATHB12                                                     --------->YAB1                                              <---------TOE2(3)--------->YAB1                   <----                                              --------------->AtSPL8    <---------AHL20(2)      -----                                              <---------------AtSPL8    --------->AHL20(2)      -----                                           <---------AHL20(2) <---------YAB1                   <----- --AGL3<---------AHL20(2)      <---------AtLEC2     --------->ICU4   --------->TOE2(3)         ------   cgattccatattatttgaaacgattgtttgtttgcatttctatgttttaatgtactaatcatatatcataacataaaaatgcaaacaagatgaaacaatt  23335700                                                                                              -------                                                                                            <--------                                          <---------AHL20(2)                                <--------       --------->YAB1                     --------->AHL20(2)                                <-------- <---------ANAC58                    <---------YAB1                                       <---------PCF2 <---------ANAC46                    <------ZmHOX2a(2)                                   <------NtERF2 <---------ANAC58        --------->AHL20(2)  <---------------AtSPL3                  --------->ZAT2 -----ICU4               <---------AHL20(2)  <---------------AtSPL8                  --------->At4g35610 ---->YAB1             <----------DOF2 --------->TOE2(3)                           <-----------RAV1(2) ---->ATHB51        ------->TEIL    --------->ARR11(3)                            <------ZmHOX2a(2) ----ATHB51   <-------TEIL          <---------ARR11(3)                     ------->TEIL--------->ALFIN1 --->ICU4<---------YAB1--------->TOE2(3)<---------YAB1        <-----------GT1    <-----------HVH21   atggcttatttataaatacatgaatctttaatttcgaagatcattaaaatgtactgacaatttttaacatgaccatgtatatcgatcaggtggggcttgt  23335800  Previous    Next  AGI:  At1g62978.1    Description:  unknown protein Range:  from: 23335127    to: 23335273    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g62980.1    Description:  ATEXPA18 (ARABIDOPSIS THALIANA EXPANSIN A18). Identical to Expansin-A18 precursor (EXPA18) [Arabidopsis Thaliana] (GB:Q9LQ07); similar to ATEXPA7 (ARABIDOPSIS THALIANA EXPANSIN A7) [Arabidopsis thaliana] (TAIR:AT1G12560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63638.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117); contai Range:  from: 23335341    to: 23336775    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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