Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------At4g35610                                                                                   --------->At4g35610                                                                             ----------->HVH21                                                                           --------->At4g35610                                                                           <---------At4g35610                      <---------DEAR3(1)                                <---------MYB52(1)                     <---------LBD16                                   <-----------HVH21     <---------At4g35610                                               --------->LBD16     --------->At4g35610<------NtERF2                                 <---------ANAC58             -- ----ARR14(2)  <---------GLK1(2)                                  --------->At4g35610         <------ --->ARR14(2)  --------->ARR14(2)  --------->ARR14(2)             <---------ZAT2  --------->MYB52(1) >ANAC58     --------->LBD16       <---------ARR14(2)             <---------At4g35610      ---------- >ANAC58   <---------LBD16     <------ZmHOX2a(1)  <---------TOE1(1)   <---------ANAC58 --------->ARR14(2) >ANAC46 <---------ALFIN1     ----------->GT1     <---------TOE2(1)   <---------ANAC46 <---------ARR14(2)   ccgaaacagctccaccggaatttctcggcgagaggagaatacgagagagagaacgaggtaaaccagtaagctccgtgagatgaccagcggattgtgaccg  23323600       --------->LBD16       ----------->GT1     ------>ZmHOX2a(2)     <---------LBD16     =========================HOX2a_HOX2a    <------ZmHOX2a(2)    ==========================HOX2a_HOX2a                                                        <---   --------->ARR14(2)                   --------->ZAT2                                           <---   <---------ARR14(2)                   --------->At4g35610                                      ----  <---------PCF2                       --------->GLK1(2)                                   <---------ANAC58 ----------->ARR10                 >>>>>>>>>TBF1                                           <---------ANAC58 ------->ALFIN1                 >>>>>>>>>TBF1             <---------LBD16            <---------YAB1 ---LBD16              <------ZmHOX2a(1)<---------At4g35610 --------->LBD16        <-----------GT1--- ->HVH21  ---------->DOF2    >>>>>>>>>TBF1    <------ZmHOX2a(1)             ---------->ID1<----------   ggtgggatccggtaaacccgaattaggagaagaagaagaagaagctgaggagttttgttcaccggaattatctgattcgtcgtttttacgatttcgtttt  23323700                                                                       --------->AtMYB61                                                                       <---------ALFIN1        ======                                                                  --------->TOE1(1) =================                                                             <---------ALFIN1       ------->GAMYB                                                            --------->ANAC46       <---------ANAC55(2)                                                            --------->ANAC58       --------->ANAC58           ---------->DOF2                                  --------->ANAC58       --------->ANAC55(2) ------TOE1(3)                                            <---------ALFIN1       <-----------GT1 ------TOE2(3)               --------->ANAC58          --------->AtMYB61         --------->MYB52(1) ----->MYB59                 --------->ANAC58         --------->MYB46(3) <---------ALFIN1      ------ -------->GT1                --------->ANAC46    <---------KAN4(2)--------->TOE2(1)--------->ANAC58 -------AGL1         ---------->DOF2            --------->YAB1   --------------->AtSPL8  --------->YAB1   aggtaaaactgaagaaagtagaagaaagcacaaggaatcacagagcctaagaataaaccaccacgaccttgtaccacaccttgtaacggaacaataaccc  23323800                               --------->LBD16                             <---------LBD16                            <---------DOF5.7(2)                            --------->MYB52(1)                        --------->O2                        --------->TGA1a                     --------->DREB2C(2)                     --------->RAP2.3(3)                     ----------->HVH21                     --------->DEAR3(1)                     --------->At1g77200                                  <------MYB46(1)                    --------->ERF1                                        <---------MYB46(3)                    --------->DEAR3(2)                                    <------MYB83                    --------->RAP2.3(1)                                <---------MYB52(1)                    --------->ORA47(2)                               --------->LBD16                    --------->ATERF1(1)                            <---------LBD16                   --------->LBD16                                 <------NtERF2<---------SPL7                   <---------At4g35610                            ------>NtERF2<---------DEAR3(2)                   ------>NtERF2  <---------GLK1(1)              --------->ARR14(2)   <-----------HVH21       <---------MYB46(3) --------->DOF5.7(2)                <---------LBD16   <------MYB46(1)       --------->ABI4(2)<---------TGA1a                   <---------GLK1(1)    <------MYB83       --------->MYB55(2)<-----------HVH21                --------->GLK1(1)   --------->MYB46(2) <---      <---------AtMYB61 <---------O2                      --------->ZAT2 <---------AtMYB61  ---------      --------->ALFIN1------>NtERF2--------->ICU4         <---------ZAT2 --------->MYB59    <--------     <---------MYB52(1)<------NtERF2            --------->YAB1   <---------ARR14(2)--------->ANAC55(2)    --------->LBD16<---------ATERF1(1)       --------->ARR14(2) --------->ATERF1(1)<---------ANAC55(2)   --------->LBD16 --------->At4g35610       <---------GLK1(2) ------>NtERF2  --------->MYB52(2) ----  <---------LBD16 --------->DEAR3(1)  <---------YAB1      --------->At4g35610 <---------------AtSPL3 =================================MYC_MYB    <---------ARR14(2)--------->LBD16--------->MYB59    <--- =================================MYC_MYB<-----------------AGL1<---------ATERF1(1)--------->SPL7 ---- ->GAMYB       --------->AtMYB61  --------->GLK1(1)       <---------At4g35610 --------------->AtSPL3   tcatcccggtggttctacctccgccgacgttaccggaattcttatcggaatcggaattggagctccggctccggtttggttcggtacgggtcattgtagt  23323900                       <---------AHL20(1)                       --------->AHL20(2)                       --------->AHL20(1)                                         --------->MYB52(1)           --------->MYB59<---------AHL20(2)                                      <---------DOF5.7(2) ------ZAT14          <---------AHL20(2)                    <---------TOE1(3)    *TSS     <---------- >ZAT14    <---------TOE2(3)                                <---------TOE2(3)    <---------WRKY12 -ZAT14    <---------TOE1(3)                        <---------ALFIN1             <---------WRKY38(1)- ----->ZAT14      <---------AHL20(2)              ------>NtERF2             <---------ANAC46       <- ------ZAT18      --------->AHL20(2)    --------->YAB1 <----------DOF2    <-----------HVH21       --- ----->ZAT18----------->GT1   <---------ZAT6     --------->PCF2      <-----------GT1     --------->ATHB12   gaactcatgtttttaggtaaataaatattttagtgtttgaaatcaaaatcggagccactttgaaggttttttaacgggtcgggttaacggataattgagt  23324000                                                           <---------AHL20(2)                                                           <---------AHL20(1)   <------NtERF2                                           --------->AHL20(1)  ------>NtERF2                                       --------->AHL20(2)            <---------DAG2 <---------DEAR3(1)                          ----------->GT1<---------AHL20(2)      <----------DOF2 --CBF      --------->CCA1(2)               --------->MYB59--------->AHL20(2)      <---------ANAC58 -------->SPL7                              <---------TOE2(3)                      <---------ANAC58 < --------ATERF1(1)    ---------->DOF2       <---------TOE1(3)                    <-----------GT1    - -------->HVH21 ---------->DOF2     <---------YAB1---------->DOF2           <------------------------ANAC81   ccgacggcgaagagatttgaaagagaaagagaagagttttgatttttaggttaaaagaaaataaaattcgaatttgtttgtttttgctttttggattttt  23324100                          --------->ANAC58                          --------->ANAC58                         <---------TOE1(2)                         --------->SPL7          <---------RVE1(1)                         <---------ZAT18         <---------CCA1(1)                       <---------SPL7           --------->ARR11(3)                      <---------ANAC58          <---------ARR11(3)                         <---------                <---------AHL20(2)            <---------TOE2(3)                           <---------DAG2           ------>ZmHOX2a(2)              <-------GAMYB                       <-----------GT1   <---- ---------AHL20(2)    <---------ANAC58   --------->MYB52(2)            ----------->GT1 <-----------GT1 -------->AHL20(2)    <---------ANAC46   <---------MYB46(3)        <------ZmHOX2a(1)  <-----------GT1   gtttaatttctgatctgttttatttcgtacgctcgtttttgggtcgttgagattttttggagggagagaggagatgtaaattactatattacccttttct  23324200     <---------LBD16                   <----------DOF2     --------->TOE2(2)          <---------HSFB2a(2)          ----------->GT1     --------->TOE1(2)          --------->HSFB2a(2)       ---------->DOF2    ----------->RAV1(2)        <---------LBD16           --------->YAB1  <-----------GT1         --------->ARR14(2)          <---------HSFB2a(2) -DOF2   <---------PCF2   <---------GLK1(2)           --------->HSFB2a(2)                           < ------DOF2               <---------ARR14(2)    <----------DOF2                   --------->YAB1    -   tttttaacctgggtccctgaagtttttggattctctggaaacttttctgtctttttctataaaagtttaaaaacttgaaacaaattatagtgaatgtgag  23324300                                         <---------AHL20(2)                                       --------->ANAC55(2)                                       <---------ANAC55(2)                                     --------->CCA1(2)                                     --------->GLK1(1)                                    --------->ARR14(2)      <---------AHL20(2)            <---------ARR14(2)     <---------AHL20(2)          --------->HSFB2a(2)     --------->AHL20(2)          <---------HSFB2a(2)               ----------->GT1   <---------YAB1               <---------LBD16              --------->AHL20(2)           <---------ZAT18 ---------YAB1                 <---------LBD16     <---------AHL20(2)                     --------->ZAT18 -------->ICU4    ------->TEIL<-----------GT1      --------->AHL20(2)  --------->MYB52(2)--------->ALFIN1   tgattattttaatttgtatgtatatatgtttttttcgggatatgtaattggatttatatgtaagaaaataggttatttgtatgttttagatgtgcggtcc  23324400                                                                                        <<<<<<<GRF7                                                                                      ----------->HVH21                                                                                      ------>ZmHOX2a(1)                                                                                 --------->KAN4(2)                                                                                --------->KAN4(1)                                                                                <----------TaMYB80                                                                                <---------KAN4(1)                       <---------MYB46(3)                                      ---------->TaMYB80                      <---------AtMYB61                                        <---------KAN4(2)             <---------WOX13(1)                                                --------->ARR14(2)           --------->ATHB12    ----------->GT1              ------->TEIL       <---------ARR14(2)          <---------YAB1  <---------MYB46(3)          ------->TEIL          <---------ANAC46   aaatggagagttttgattgaattgatggtggatgagtgaaatattgagtagtattgaatctgaatctaaaaacaatttgagtatattcctgacattgtaa  23324500  Previous    Next  AGI:  At1g62960.1    Description:  ACS10 (ACC SYNTHASE 10); 1-aminocyclopropane-1-carboxylate synthase. Identical to Probable aminotransferase ACS10 (ACS10) [Arabidopsis Thaliana] (GB:Q9LQ10); similar to ACS12 (1-Amino-cyclopropane-1-carboxylate synthase 12), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT5G51690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63606.1); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, sub Range:  from: 23321852    to: 23323981    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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