Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ANAC58                                                                     <---------ANAC58                                                                --------->ALFIN1                                                               <-------MYC2                                                               <-------MYC3                                                               <-------PIF4                                                               ------->MYC3                                                               ------->MYC4                                                               ------->PIF4                                                               <-------MYC4                                                               ------->MYC2                                                               <-------PIF5                                                               ------->PIF5                                                              --------->O2    <---------ALFIN1                                          <---------O2                        --- ------>MYB52(1)                                              --------->TGA1a              <--------- ->ANAC58                       --------->ANAC46              <---------TGA1a            ----------->RAV1(1) ->ANAC58               --------->AHL20(2)              <---------ANAC58              --------->ANAC46 ->ANAC46               <---------AHL20(2)              <---------ANAC58              --------->ANAC58 -AtSPL8         <---------ALFIN1                 --------->ANAC46 <---------ARR14(2) --------->ANAC58   aaacagacaccttcttctcccactcttaaattacacacacttacttacacacacataagcttgcacgtggttcttgttcacatggtggaagccacagatg  23318600                                                                                <---------DAG2                                                                                <----------DOF2                                             --------->At4g35610           <---------At4g35610                                             <---------At4g35610           ----------->RAV1(2)                                          <---------At4g35610            --------->REM1(1)                                          --------->At4g35610            <---------ALFIN1                                         =================RAV         <---------ANAC58                                      <----------DOF2           <---------AHL20(2)                 --                                  ------>MYB83<-----------RAV1(2) <------------CBF                 --                                  ------>MYB46(1)               <---------AHL20(1)                 --                                --------->AtMYB61               --------->AHL20(1)            -------                                <---------MYB59 <---------At4g35610   <---------ANAC58      <-------- ---->TEIL            <------ZmHOX2a(1)  <-----------RAV1(1)    --------->AHL20(2)       <----------DOF2 --RAV1(2)           ----------->GT1 <---------DAG2            --------->AHL20(2)     <-----------GT1   tatatagagagacagagagagagaggaaacaaaaccaaaccttttgctgcagaagagacagactattaaattgcttcacctgctttacttactttccagc  23318700             --------->ANAC58             --------->ANAC46             --------->ANAC58           <---------ALFIN1                                               <---------MYB46(3)    <---------ALFIN1                                                      <------MYB46(1)   <---------ZAT18                                                        <------MYB83 ------->ANAC58        <----------DOF2                                   <---------AtMYB61 ------->ANAC58       <---------ICU4                                     --------->MYB59     -------- ------->ANAC46  --------->ANAC58                        --------->HSFB2a(2)               <---------ANAC46 -->ANAC46<---------REM1(2)    <---------CCA1(2)         <---------HSFB2a(2)             --------->ATHB12 ---------AGL1   --------->ANAC58      --------------->AGL15    <---------AHL20(2)      <---------YAB1   caaggcacactctccacgcactcatcttttctcaaatctctctctatatagatttgtgtccagaaattaatgggtttggttcggaaacttatgactggta  23318800       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->AGP1     <---------ARR11(3)     <-----------ARR10     --------->ARR14(3)     --------->ARR14(2)     <---------ARR14(2)                           <---------At4g35610     --------->ARR11(3)             <---------HSFB2a(2)     <---------ARR14(3)             --------->HSFB2a(2)                      <<<<<<<<<TBF1     <---------AGP1  <---------ANAC58             --------->At4g35610     <<<<<<<<<TBF1          <---    <---------CCA1(2)<---------ANAC58             <---------ZAT2      ---------->ID1         -------- --->GT1             <---------ANAC46            ------->TEIL    <----------DOF2<<<<<<<<<TBF1--------   atacccagatcttattctatgtttcttgaaactctcttctcgaggcaaatgcagctacttcttcatgcttttgttcttcttcttcttcgtttatcaagaa  23318900                                                   --------->LBD16                                                  --------->ANAC46                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)    <---------TOE2(3)                   --------->ARR14(2)    <---------TOE1(3)           <------MYB46(1)   ------->GAMYB                              --------   <---------DOF5.7(2)          <------MYB83      --------->RAP2.6(2)         ----------->GT1<------- --------->DOF5.7(2)--------->LBD16     <---------ARR14(2)      ----------->GT1     --------->YAB1 ---------CBF     <---------LBD16      <------ZmHOX2a(1)     <---------ARR14(2)     <---------ICU4 ->ANAC58       --------->MYB52(1)   <---------TOE2(3)       --------->ARR14(2)    --------->ICU4 ->ANAC58    --------->TOE1(3) --------->MYB59 --------->ARR14(2)       --------->ATHB12 <-------TEIL   attgttaacgaaatagcttaaccgggtttgagttcggtttaggatccgataaccgcaaatgcagattgggaaattgatttgggtaataatgttcatattc  23319000                                                  --------->SPL7                                                 --------->MYB52(1)                                                <---------SPL7                                         --------->YAB1                                         <--------HAHB4                                  --------->ARR14(2)                                  <---------GLK1(2)                                  <---------ARR14(2)        <---------ICU4        <---------LBD16  <---------MYB46(2)                                ----        --------->YAB1        --------->HSFB2a(2)------>MYB83                                    >>>>       <---------YAB1    --------->HSFC1(2)    --------->MYB46(3)                                >>>>       --------->ICU4    <---------HSFC1(2)<---------YAB1                                      ------     <---------ICU4      --------->HSFB2a(1)   <---------MYB59                               ------>ZmHOX2a(2)    --------->ICU4       <---------HSFB2a(1)<-----------GT1                                <---------ARR14(2)    <---------YAB1  <---------HSFB2a(2)  <---------ICU4   --------->GLK1(2)                --------->ARR14(2) ->ARR14(2)         --------->HSFB2a(2) <---------YAB1   <---------GLK1(2)       --------->TOE2(3) -- --ARR14(2)<-----------GT1    <---------HSFB2a(2)------>MYB46(1)        ---------->DOF2--------->YAB1   gttcacattattattacatcatctcgaagtttctcggattctattattaccgaacgagagattctacttcaattcaaagacaacatcaacgatgatccgt  23319100                                                                                        ------>ZmHOX2a(2)                                                                                      --------->ARR11(3)                                                         <---------ANAC46             <---------ARR11(3)                                                       ------->TEIL               ---------->DOF2                                                       --------->ARR11(3)  <-------TEIL<------ZmHOX2a(2)        <---------At4g35610                            --------->ARR14(2)<---------GLK1(2) ----->SPL7                                            <---------ARR14(2)--------->ARR14(2)         - >>>>>SPL4                <---------ICU4    <----------DOF2              <---------ARR14(2)  <------- >>>>>SPL7      <---------ANAC58          --------->At4g35610           ======================HOX2a_HOX2a --->LBD16      <---------ANAC58     ----------->HVH21<---------CCA1(2) =======================HOX2a_HOX2a --------->RAV1(1)        <---------At4g35610       <---------ANAC46    <------ZmHOX2a(1)   ---------   acaacagtttagcttcttgggtctctaatgctgacctctgtaacagcttcaatggtgtatcttgtaaccaagaaggattcgtcgaaaagatcgttctttg  23319200                           ------>NtERF2                           --------->LBD16                          --------->ATERF1(2)                          --------->DEAR3(1)                          <---------ATERF1(2)                          --------->RAP2.3(3)                         --------->RAP2.6(3)                         <---------LBD16                     ---------->DOF2                     --------->MYB52(1)                  --------->TOE1(3)               --------->ARR14(2)               <---------ARR14(2)                                  <---------MYB52(1)             --------->LBD16         ----------->GT1<---------TOE1(3)         <------ZmHOX2a(1) -------->ZAT6<------NtERF2<---------RAP2.6(3)      <---------TOE2(3)    ----------->RAV1(1)<-------- ---DOF2    --------->ANAC46<------NtERF2 <-----------GT1     <-----------------AGL1 ----------->GT1 >MYB52(2) <---------LBD16--------->RAP2.6(2)   <----------DOF2--------------->AGL15 --------->ANAC46   gaacactagtctcgccggaaccctaacgccggcattgtctggtttaacttctttaagggttttgactctgtttggcaacaggattacaggtaatttacct  23319300                                       --------->MYB52(2)                               <------ZmHOX2a(2)                              <---------ARR11(3)                         <---------AHL20(2)                              --------->ARR11(3)                    --------->LBD16                 <                        <---------HSFB2a(2)                         ------>ZmHOX2a(1)              --                    <---------DAG2  --------->TOE2(3)         <------MYB46(1)                   <----                    <----------DOF2 --------->YAB1            <------MYB83                      <----     <---------ANAC55(2)--------->HSFB2a(2)                  <---------AtMYB61               <------- ---GT1 ---------->DOF2 <---------TOE2(3)                    --------->MYB59            <---------MYB59   ttggattacttaaagttacagactttatggaagatcaatgttagttccaatgcattgtctggtttggttcctgaatttatcggtgatttgcctaatttaa  23319400                                                    <---------AHL20(2) -------TEIL                        --------->GLK1(2)   --------->GLK1(2) ------->ARR11(3)         <----------DOF2 <---------GLK1(2)       --------->ANAC58 -----TOE2(3)            --------->MYB52(2)         --------->AHL20(2)---------->DOF2 -----TOE1(3)        <---------ANAC58     --------->ARR14(2)      --------->ANAC46 --AHL20(2)          <---------ANAC58     <---------ARR14(2)      --------->ANAC58       --------->YAB1   ggttcttggatttgtcgaaaaatgcgttctttggagagattccaaattctctgtttaaattctgttacaagacaaagtttgtttcattgtctcataacaa  23319500  Previous    Next  AGI:  At1g62950.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G12460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63605.1); similar to Os03g0127700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048834.1); similar to hypothetical protein OsI_009597 [Oryza sativa (indica cultivar-group)] (GB:EAY88364.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains Range:  from: 23318959    to: 23321899    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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