Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     ------->TEIL                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                <---------ANAC55(2)                                                                                --------->ANAC55(2)                                                                                <---------ANAC58                                                                                <---------ANAC55(1)                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                               <---------TOE2(3)                <---------AHL20(1)                  --------->YAB1          <---------GLK1(1)                --------->AHL20(1)             <---------ARR14(2)           --------->GLK1(1)     <---------ANAC58                          --------->ARR14(2)          --------->ARR14(2)     <---------ANAC58                       --------->AHL20(2)             <---------ARR14(2)     <---------ANAC46      ---------->DOF2--------->ANAC58             <---------LBD16    ----------->STF1   ----------->GT1    --------->ANAC58            --------->MYB52(1)  ----------->HVH21    --------->YAB1     ----------->GT1     <-----------GT1 <-----------GT1--------  ----------->TGA1 <---------AHL20(2)  <---------ATHB12  ----------->GT1 --------->LBD16    ---------   tggaatgacgttttctaatatataatggtaaaagtttactaatcaagaaaatatgcataatgtataacaaaacaccggatttacgtattttctaaaataa  23195500                                                                                                    -                                                                                                    <                                                                     --------->ARR11(3)            --                                  <---------AHL20(2)                 <---------ARR11(3) <---------ARR11(3)                                  <-----------GT1         --------->TOE2(3)             <---------AHL20(1)                               ---------->TaMYB80        ----------->GT1  --------->AHL20(2)       --     --------->AHL20(2)     <------MYB83             --------->AHL20(2)   <---------AHL20(2) <------- ->AHL20(2)----------->GT1  ----------->GT1       --------->YAB1     --------->AHL20(1) --------->AHL20(1) >YAB1    --------->AHL20(1)<------MYB46(1)      <---------YAB1      <---------AHL20(1) --------->AHL20(2)   tacaaaaaaaaatatgttatataagtaagtgggtatatacttgtttatttcatgataaaatgttaaacaaatatttttaattttaaacaaaatattaaca  23195600                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                                                                     <---------AHL20(2)       <-----------GT1                                                               --------->AHL20(1)     --------->ARR11(3)                                           <---------YAB1     --------->AHL20(2)    --------->RVE1(1)                                           --------->YAB1      <---------AHL20(2) -------->AHL20(2)                                             <---------ATHB12     --------->AHL20(2) ---------AHL20(2)        <---------AHL20(2)                 --------->WOX13(1)  --------->AHL20(2) ------->AHL20(2)     --------->ICU4                 --------->AHL20(2)         --------->AHL20(2) ------->YAB1       --------->YAB1                  <---------ATHB12          --------->TOE2(3)   <-- ----GT1            --------->AHL20(2)            --------->WOX13(1)        <-------TEIL<---------AHL20(2)   attaaaatatcacccttgtgaataatatttaaaacttgtgactatctaatttcaatcaaatatcaatcatatttgaaattcattaaaaaaattatttaac  23195700           --------->YAB1           <---------ICU4           --------->ATHB12            --------->YAB1          --------->ICU4              <---------YAB1       ------>ZmHOX2a(1)             <<<<<<<<<<GATA-4      <---------MYB59                <<<<<<<<<<GATA-1                                               < <---------DAG2                      <<<<<<<<<<GATA-2                                               < <----------DOF2                     <<<<<<<<<<GATA-3                                              -- -----GT1 <---------YAB1           ------>ZmHOX2a(1)                                               <- --AHL20(2)-------->ATHB1---------->DOF2                                                        <---- ----GT1  <---------ATHB12--------->DAG2        ---------->DOF2--------->AHL20(2)      <---------At5g28300 ---------GT1   ----------->GT1   --------->TOE2(3)     --------->TOE1(2)             <-----------GT1   ttacttttcctaatcattgagaaaaaaaaaagttttccttatcataaaaaaaaagagacctaagattatatgtgttagatgtttctatttaccatatgaa  23195800         ----------->GT1       <---------ZAT14      <---------REM1(1)      --------->ALFIN1    <---------ANAC58    <------MYB46(1)    <------MYB83    <---------ANAC46    <---------ANAC58                   <---------AHL20(2)   <------MYB83                       --------->AHL20(1)   <------MYB46(1)                    <---------AHL20(1)   --------->MYB55(2)                 --------->AHL20(2)   <---------MYB46(3)                 <---------AHL20(2)                                     *TSS <--------P                          --------->AHL20(2)                                      <------- ---------ANAC58                     <---------AHL20(2)                           <---------MYB52(1) ---------ANAC58                  --------->AHL20(2)                    <---------ZAT14      <------- ------->ATHB12                --------->YAB1                <-----------GT1  --------->MYB52(1) --------MYB46(3)             <---------YAB1              --------->YAB1--------->ZAT14   <---------- --------CBF                --------->WOX13(1) <---------RVE1(1)   <---------ATHB12     <-----------GT1   ttggttgggtgtagtaagtaaactattcatctatcataaattaatttcgatattttgtaagaataactaatcactgaacaaaacggtagtttacactttt  23195900                                            ----------->RAV1(2)                                          ------>MYB83                                          ------>MYB46(1)                                        <---------ALFIN1                                       --------->At4g35610                                       <---------At4g35610                                     <---------ALFIN1                                        --------                                   --------->ANAC58                                          --------                             <-----------HVH21                                               --------                          <---------ZAT2--------->AtMYB61                              <---------HSFC1(1)                          --------->ZAT2--------->DEAR3(1)                             --------->HSFB2a(2)                          <---------At4g35610                               --------->ARR11(3)                ------>ZmHOX2a(1)  --------->ANAC58                         <---------ARR11(3) ---DOF2   --------->HSFB2a(1)     --------->ANAC46                        --------->HSFB2a(1) --DAG2    <---------HSFB2a(1)   <---------ALFIN1    ------>ZmHOX2a(1)  --------->LBD16--------->HSFC1(1) -GT1    <---------GLK1(2)--------->At4g35610  <-----------HVH21<---------MYB52(1)     <---------HSFB2a(2)   cagtggcattggaatctcctcaaaatcgagctgtcacactcacctcccctgtctcctcttcgcttcggtacttccgaagatttcattttctagacactcc  23196000                                                                                               <-----                                                                                       <---------ANAC58               --------->TOE1(3)                                --------->ZAT2         <---------ANAC58               --------->TOE2(3)                                <---------At4g35610   ------>ZmHOX2a(2)            <---------ALFIN1                                    <---------ZAT2       <------ZmHOX2a(2)            --------->ANAC46                            <---------ZAT14             <---------ARR14(2)          --------->ANAC58                              --------->ZAT14             --------->ARR11(3) ------>ZmHOX2a(1)                               <---------MYB52(1)                 <---------ARR11(3) ->ANAC58 --------->ANAC46                       --------->ARR14(2)                 --------->ARR14(2) ->ANAC46 <---------ALFIN1                       <---------ARR14(2)                --------->GLK1(1) ->ANAC58 --------->ANAC58                     ----------->GT1  --------->At4g35610<---------GLK1(1)   atcctctctcacacacaccttaatttcgaatttttgtcaattggtgatgcagttactctgaactcgagctgagagagaggcatagagatccttgcgattc  23196100      --------->LBD16     --------->ANAC55(2)     --------->ANAC46                                      <<<<<<<<<ARR2     <---------ANAC55(2)                                 --------->WOX13(1)          --------->ZAT14  <---------ARR14(2)                                    --------->MYB46(3) <---------At4g35610  --------->ARR14(2)                              --------->YAB1           ----------->RAV1(2) <---------CCA1(2)           <------------------------ANAC81--------->YAB1 --------->At4g35610 ------ --TEIL        <-----------GT1               ------>ZmHOX2a(1)            ------->TEIL        -------   gttgtatccgtaacatttaacaatctcgttttgtttttcttctgttcctctattatcaacaatcaaatggctaatgcatctgggttcttcactcatcctt  23196200                                                ------>ZmHOX2a(2)                                              <---------ARR14(2)                                              <---------ARR11(3)                    <---------ARR14(2)     <---------HSFB2a(2)                    --------->ARR14(2)     --------->HSFB2a(2)           <---------ANAC58               <-----------------AGL2        --------->TOE1(2)                 <---------LBD16                                         <--       <---------ANAC58                 --------->GLK1(2) <---------ANAC46                        <--       <---------ANAC58        --------->LBD16--------->ARR11(3)      <---------GLK1(2)          <---    ------>ZmHOX2a(1)         <---------ANAC46<---------AGP1 <---------ARR14(2)                  <---   <---------MYB59  --------->GLK1(2)   <---------ARR14(2)<---------ANAC58                  <-------- >ZmHOX2a(1)   --------->At4g35610      --------->ARR14(2)<---------ANAC58                --------->ZAT18 -->TOE2(3)<---------ANAC58  <---------LBD16  --------->ARR14(2)   <---------ATHB12       <---------ZAT18   caattcctaacttgcgaagcagaatccatgttccggttagagtttctggatctgggttttgcgtttccaatcgattctctaagagggttttgtgctctag  23196300         <---------ETT(2)      <---------ANAC46  --------->At4g35610  --------->ZAT2   <---------HSFB2a(1)               --------->At4g35610  <---------ZAT2   --------->HSFC1(2)                --------->ZAT2  <---------At4g35610                                <---------ZAT2 ---------HVH21    --------->HSFB2a(1)         ------->GAMYB   <---------ICU4 ---------TGA1     <---------HSFC1(2)         <---------MYB52(2)        --------->AHL20(2) ------ANAC58   <------ZmHOX2a(1)             --------->MYB46(3)  <-----------GT1 ------ANAC58 <---------TOE2(3)          <---------ARR11(3) --------->YAB1 --DOF2--------->LBD16           ------>ZmHOX2a(1) <-----------RAV1(2)  <---------AHL20(2)        ---   cgtcagctccgtcgataaggatgcttcgtcttctccttctcaatatcaacgacccaggtgaataaaaatcacatttttatgtctctcttcacttatccat  23196400  Previous    Next  AGI:  At1g62640.1    Description:  KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III); 3-oxoacyl-[acyl-carrier-protein] synthase. Identical to 3-oxoacyl-[acyl-carrier-protein] synthase III, chloroplast precursor [Arabidopsis Thaliana] (GB:P49243;GB:P93722;GB:Q9SI84;GB:Q9SXD3); similar to beta-ketoacyl-ACP synthase III [Jatropha curcas] (GB:ABJ90470.1); contains InterPro domain Thiolase-like; (InterPro:IPR016039); contains InterPro domain 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III (InterPro:IPR013751); contains InterPro domain Beta-ketoacyl-acyl carrier protein synthase III (FabH); (InterPro:IPR004655); contains InterPro domain 3-Oxoacyl-[acyl-carrier-protein (ACP Range:  from: 23195893    to: 23198768    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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