Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ARR14(2)                       --------->ARR14(2)                       --------->GLK1(2)      <---------ANAC58       --------->AtMYB61                      <---------ANAC58       ------->GAMYB   ------->TEIL     <----------DOF2             <-------TEIL      --------->MYB46(3)          --------->ARR14(2)               --------->CCA1(2)    --------->YAB1 ------->At4g35610  <---------YAB1<---------GLK1(2)       <---------AHL20(2)   <---------YAB1 ---->ZmHOX2a(1)  --------->YAB1  <---------ARR14(2)      --------->AHL20(2) --------->YAB1   cctctgcaacctccagtctctcatgaatctggttcggattctctttttccttgtttctatataatttagatacatggttttataattctatcatatgtct  23172400                                                                        --------->TOE2(3)                                                                       <--------HAHB4                                                                       --------->ATHB12                                                                       --------->YAB1                                                                       <---------ICU4                                  <---------------AGL15               --------->ICU4                           <---------AHL20(2)                         <---------ATHB12                          --------->AHL20(1)                          <---------YAB1                          <---------AHL20(1)                        --------->YAB1                         <---------AHL20(2)                        <---------YAB1                       --------->AHL20(2)                        --------->YAB1                      --------->AHL20(1)                         -------->HAHB4                      <---------AHL20(1)                        <---------YAB1                     --------->AHL20(2)                    --------->YAB1                   --------->AHL20(2)         <---------AtMYB61<---------TOE2(3)              <---------AHL20(2)  --------->YAB1           --------->TOE2(3)   <----------DOF2   attttggatatagtattttaaaaatatatatatttttcataaatggttatggtctattctatgttaatgataatcattagtctttttgtcaactatgttt  23172500                                                        <-------GAMYB                                                       <---------DEAR3(2)                                                       <---------MYB46(3)                                                      <---------DEAR3(1)                                              --------->AHL20(2)          --------->LBD16                                   <-----------GT1  ------------>AtMYB77<---------LBD16                                <-----------GT1<---------AHL20(2) <------ZmHOX2a(2) ----------->RAV1(1)                         <----------DOF2  --------->AHL20(2)     --------->AGP1  --------->ZAT6  <---                         <---------DAG2 <---------MYB52(1)      --------->At4g35610--------->ANAC46 <   ttttttccaacaaatttagtatgtaaacttttttttactaccgttttattaaatcgacggttgatcagatcaactccggtataacacaacataagtttcg  23172600                                                                        ----------->GT1                                                                 --------->ANAC58                                      --------->MYB52(1)  <---------O2  --------->LBD16                                      ==============================MYC_MYB                                     ===============================MYC_MYB                                     ------->GAMYB        --------->TGA1a                                    --------->MYB46(3)    <---------ANAC58                 --------->ARR14(2)                                    <---------MYB52(2)    <---------bZIP60(2)              ------->TEIL                                    <---------MYB111(1)   --------->O2<---------LBD16      <---------ARR14(2)                                    <---------MYB111(2)   <---------TGA1a               --------->ANAC55(2)                                    <---------MYB55(2)    <---------ANAC46              <---------ANAC55(2)                                   <---------At4g35610    --------->ANAC55(2)         <-----------GT1                                   --------->At4g35610    <---------ANAC55(2)     --------->AHL20(1)                        <---------AHL20(2)                <---------ANAC58        <---------AHL20(1)                      <---------RVE1(1)                   <---------ANAC55(1)--------->AHL20(2) --------->YAB1      <---------ARR11(3)       <---------YAB1     --------->ANAC58--------->AHL20(2) ------MYB52(1)      --------->ARR11(3)       --------->ICU4 <-----------HVH21 --------->AHL20(2)  -- ---------YAB1       <---------GLK1(2)-------->P     <---------ZAT6  --------->MYB52(1)<---------TOE2(3)   ttatcaaaacaaaaacaaaaacagatttttttttgtcaactaccagtgaagattagtcttacgtgtcaagaaaccggataaaaatatataacgtatttgg  23172700                      <---------LBD16                   --------->MYB52(1)                 --------->MYB46(3)               <-----------GT1           <---------CCA1(1)         <---------AHL20(2)           <---------RVE1(1)     <---------ICU4          <---------AHL20(1)     <--------HAHB4          --------->ARR11(3)     --------->ATHB51          --------->AHL20(1)    --------->ICU4                                   --------->HSFB2a(2)          <---------ARR11(3)    <---------YAB1                               <---------O2        ----------->ARR10    <-------TEIL                                    <---------TGA1a        <---------TOE2(3)  --------->GLK1(1)                                 --------->O2    --------->ZAT2 ---------->DOF2   --------->AHL20(2)                      --------->TGA1a    --------->At4g35610  <------NtERF2                                <---------AHL20(2)    <---------At4g35610 --------->LBD16                               --------->AHL20(2) <---------ATHB12<---------MYB46(2) --------->YAB1--------->YAB1    ----------->TBP                 - ------->WOX13(1)<---------MYB52(2)<---------YAB1--------->ICU4   --------------->AGL15           ---   gcaatcagctaagatattaactaacgcggagttcattattaaaatggagtaatgatgttttcagttttctatataaatcacgtcgagaccgtagagtctt  23172800                                                                                  ------>ZmHOX2a(1)                                                                             <---------At4g35610                                                                             --------->At4g35610                                                                             --------->ZAT2             <-----------GT1      --------->ANAC46                           <---------ZAT2   --------->MYB46(3)     ------>MYB46(1)                                  <---------ALFIN1 *TSS    ------>ZmHOX2a(1)------>MYB83                                    <------NtERF2   <---------ATHB12 -------->ANAC46         ----------->RAV1(1)          --------->YAB1      <---------At4g35610       < ------>ANAC46         --------->MYB46(3)    --------->YAB1              ------>NtERF2  --------->WOX13(1)   acacaacaatccttcttacatttctaccaacaaaacacaaaacacaaacatagcattcaaaactttgaaaaatggcaccagctcctagtccaatcaattc  23172900           ----------->HVH21          <------NtERF2          --------->At5g28300        <---------ANAC46        <---------DREB2C(2)        <---------DEAR3(1)       <------NtERF2       <---------ABI4(1)     ----------->HVH21     --------->ALFIN1    <-------MYC4    ------->PIF5    ------->MYC4           --------->DEAR3(1)    <-------PIF5          --------->ATERF1(1)    <-------MYC2         <---------At4g35610    ------->MYC2         --------->ZAT2    -------->ABF1        <---------ZAT2    <-------MYC3         <---------ATERF1(1)    ------->MYC3    <------NtERF2   --------->O2     <---------LBD16                                                    -------->ZAP1   <---------TGA1a  --------->ATERF1(1)                                             --------->WRKY12   --------->ANAC46<---------ATERF1(1)                                              --------->WRKY38(1)   <---------ANAC55(2)   --------->At4g35610                                        ----------->HVH21   --------->ANAC55(2)--------->LBD16                     <---------ANAC46    --------->WRKY12   --------->TGA1a ------>NtERF2                      <-------TEIL          <-------GAMYB   <---------O2------>ZmHOX2a(2)                  --------->ARR11(3)       <---------MYB46(3)  ------------>OsbHLH66<------NtERF2              <---------ARR11(3)    --------->DEAR3(1) <---------ALFIN1 <---------ARR14(2)    <---------At4g35610          <---------ALFIN1<---------WRKY18(1) ---------REM1(2) --------->ARR14(2)    --------->At4g35610      <-----------HVH21 ------>ZmHOX2a(1)   tcaacacgtggcggtgatcggagccggagcagccggtttagtagcagccagagagcttcgtcgtgaaggtcacaccgtcgttgtccttgaccgagagaaa  23173000                                                                          --------->ZAT14                                                               <---------ETT(1)                                                              --------->MYB46(3)                                                         --------->MYB46(3)          <----------DOF2                                --------->DEAR3(2)   <------MYB46(1)                                    <---------WRKY18(1) <---------ZAT14   <------MYB83           ----------->HVH21          ----------->HVH21    --------->ZAT18  --------->MYB111(2)   --------->At4g35610     <------MYB83  --------->DEAR3(2)  --------->MYB111(1)   ----------->RAV1(2)     <------MYB46(1)----------->HVH21        <---------REM1(2)  --------->MYB46(2)  --------->ANAC46      --------->ZAT2----------->HVH21  --------->ANAC46 <--------P           <---------ALFIN1      <---------ZAT2<---------ETT(1)<---------ZAT18  --------->ANAC46   caagtaggtggtctttgggtttacacacctgaaaccgagtccgacgagcttggtcttgacccgacccgacccatagtccactcgagcgtctacaagtctc  23173100                                                             ----------->ARR10                                                         <------NtERF2                                                       --------->ALFIN1                                                      ------->MYC4                                                      <-------MYC2                                                      <-------MYC4                                                      <-------MYC3                                                     <---------TGA1a                                                     <---------O2                                                     --------->O2                                                     <<<<<<<<<<HY5                                                     >>>>>>>>>>HY5                                                     --------->bZIP60(2)                                                     <---------bZIP60(2)                                                     --------->TGA1a                                                     <---------PIF3(3)                                                     --------->PIF3(3)                                                   <---------ALFIN1                                                 <----------------PIF3(2)                     -------                                              <---------ANAC58   ------>ZmHOX2a(2)          ---------                                              <---------ANAC46 --------->ARR14(2)          --------->LBD16                                              <---------ANAC58 <---------ARR14(2)      --------->ARR14(2)                                           <----------DOF2<---------ANAC46             <---------ARR14(2)                                           ====================bZIP_DOF        --------->HSFB2a(2) --                                       <-----------GT1------->MYC2             <---------HSFB2a(2) --      ------>MYB83                   --------->GLK1(1)<-------PIF5          --------->GLK1(2)<-------      ------>MYB46(1)                <---------GLK1(1)------->PIF5  <---------MYB52(1)<---------GLK1(1)   --------->MYB46(3)               --------->ARR14(2)------->MYC3 <-----------HVH21  --------->GLK1(1)   tccgaaccaatctccctagagaatgtatgggttacaaggatttccctttcgtgccacgtggcgatgatccgtcaagagactctagaaggtatccgagtca  23173200              --------->SPL7              <---------ARR14(2)              --------->ARR14(2)              ------->TEIL             <---------CCA1(2)           <---------ANAC46           <---------ANAC58       <---------ANAC58       <---------ANAC58     <---------ARR11(3)                                         --------->HSFB2a(2)     --------->ARR11(3)                                  ------>ZmHOX2a(2)   <---------HSFB2a(1)                                   <---------LBD16   --------->HSFB2a(1)                                  --------->ARR14(1)     <---------ANAC46   ----------->ARR10                                   <---------ARR14(2) <-----------ARR10 ---->HVH21<---------ANAC58                          ----------->ARR10    --------->ARR14(2) >ANAC46   --------->ANAC55(2)                   ===============HOX2a_HOX2a<-------TEIL           --- ------->ANAC58          <----------DOF2         <------ZmHOX2a(1)     <---------TOE2(3)         ---- ------->ANAC58 --------->TOE1(3)        >>>>>>>>>MYB98--------->ARR14(2) <---------ARR14(2)     ---- ----HVH21--------------->AtSPL8         <---------TOE2(3)      <---------HSFB2a(2)       -----------   cagggaagttcttgcgtaccttcaagactttgctacagagtttaacatagaggagatgatccggttcgagactgaggttcttcgtgttgaaccggttaat  23173300  Previous    Next  AGI:  At1g62570.1    Description:  flavin-containing monooxygenase family protein / FMO family protein. similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G62560.1); similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G62540.1); similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G65860.1); similar to FMO-like protein [Thellungiella halophila] (GB:ABJ98059.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain Flavin-containin Range:  from: 23172801    to: 23175770    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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