Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)       <---------At4g35610                                                     ------>ZmHOX2a(2)       --------->At4g35610                                                    <------ZmHOX2a(2) ------>At4g35610                                                          --------->LBD16--------->ARR11(3) ----->ANAC58                                                             <---------HSFB2a(2) ----->ANAC58                                                             --------->HSFB2a(2)<------- ----->ANAC46                                                            <---------LBD16  <---------ARR11(3) ---->RAV1(1)                     --------->ZAT18                    <----------DOF2      <---------ARR14(2) ->AtMYB61                        <---------ZAT18                <---------GLK1(2)        --------->ARR14(2) --ALFIN1          --------->ANAC58                           <---------HSFB2a(2) <---------DAG2 >MYB46(3)         --------->ANAC58          ------>ZmHOX2a(1)--------->HSFB2a(2) <----------DOF2<---   agcaaactcggctgaactcgaacccaattcactgagtcgactcgttcctatcgagttaactcgtccagaagcttttcccgatcgctttctccgatctttc  23104300                                                                    <---------ANAC58                                                                    --------->O2                                                                    <---------ANAC55(1)                                                                    --------->TGA1a                                                                    <---------TGA1a                                                                    --------->bZIP60(1)                                                                    <---------bZIP60(2)                                                                    <---------bZIP60(1)                                                                    <---------O2                                                                    <---------ANAC55(2)                                                                    --------->ANAC55(2)                                                                    <---------ANAC46                                                                    <---------ANAC58                                                                   ----------->bZIP911(2)                                                                   ----------->bZIP910(1)                                                                   ----------->STF1                                                                  <---------TGA2(2)                                                                 ----------->TGA1                                                                 ----------->HVH21                                                                <-----------HVH21                                                              <---------DEAR3(1)                                                           <------NtERF2                                                          <---------ATERF1(1)                                                        --------->ATERF1(1)                                                        <------NtERF2                                           <---------ANAC46--------->ATERF1(1)                                         ------>ZmHOX2a(2)<---------RAP2.3(1)  ----------->HVH21                       --------------------->WRI1      <---------ATERF1(1)   --------->At4g35610          --------->At4g35610--------->ANAC58         <---------DEAR3(1)     <---------At4g35610    <<<<<<<<<TBF1   --------->ARR11(3) --------->ARR11(3) ------>NtERF2<-----------HVH21 ---DOF2  <---------At4g35610--------->ANAC58         --------->ALFIN1--------->ALFIN1 -------DOF2        <---------ARR11(3) <---------ARR11(3)<---------RAP2.3(2) ----------->RAV1(2)   --   tttttcttcttcatctccaaactatcttcgtaagcatcgatgatctcgtgaatgagttggcgcctcggtgacgtgtcccatctgacccagtaactcgtgt  23104400                                                                      <-------TEIL   --------->LBD16                                                                     --------->ARR14(1)                                                                     --------->CCA1(2)                                                                    --------->ARR14(2)        <------                                                                    --------->ARR11(1)        -------                                                                    <---------ARR14(2)<------NtERF2                                              ==========================bZIP_DOF   --------->ATERF1(1)                                        --------->ARR11(3)         --------->CCA1(2)--------->DEAR3(1)                                        <---------ARR11(3)    <---------TGA1a      <---------LBD16               ---------->DOF2      <---------ICU4            =======================================            --------->YAB1         --------->ICU4      <---------ANAC58            <------NtERF2  <--         --------->WOX13(1)<------ZmHOX2a(1)  <----------DOF2 <---------O2       <---------DEAR3(1) ------->MYB46(3)  ---------->DOF2 <---------YAB1      <---------ANAC58         --------->ATERF1(1)   aacaactaaaacaatcacaaagaaagagaggagagtgatgattatcttctttgtttttcttgagacgagagatacgatttgagtcgccggagtttgagat  23104500                                         --------->ANAC58                                         --------->ANAC58                                         --------->O2                                         --------->TGA1a                                      <------NtERF2                                     ------>NtERF2                                     <---------ATERF1(1)                                     --------->ABI4(1)                                    <---------ATERF1(2)                                    --------->RRTF1(2)                                    --------->ANAC58                                    --------->RRTF1(3)                                    --------->ATERF1(2)                                    --------->RAP2.3(3)                                    --------->RAP2.6(2)                                    --------->ANAC46                                   --------->ORA47(2)                                   --------->DEAR4(2)                                   --------->RAP2.3(1)                                   <------NtERF2                                   --------->ATERF1(1)                                   --------->RAP2.6(1)                                   --------->ERF1                                                   -                                   --------->RRTF1(1)                                               <                                  <---------ATERF1(1)                                               <                                  <---------DEAR4(2)                                                <         --------->ARR11(3)       <---------RAP2.3(1)                                               <         <---------ARR11(3)      <---------DEAR3(1)                                                 -       --------->ANAC58         --------->ZAT18                                                    <-       --------->ANAC58         <---------ABI4(2)  <------ZmHOX2a(1)                               <-   --------->ANAC58     <---------ALFIN1 <---------TGA1a                                           --   --------->ANAC58    --------->MYB46(3)<---------O2                                              -- <--------P           ------>ZmHOX2a(1) ------>NtERF2                                              <- ==================================================MYC_MYB                                        <-- ---At4g35610      <------ZmHOX2a(2)--------->DEAR3(1)                                            --- -->At4g35610     <---------ARR14(2)--------->RAP2.3(2)                                       XXXXXXX =========MYC_MYB --------->ARR14(2)--------->ANAC58       <---------ANAC46                <--------- -------TOE2(3)   <---------ARR11(3)--------->DREB2C(2)   <---------LBD16              <---------DEAR3(2)   gaggtaagcaagaacttcacgatcctccaccgagagcgccgccacgagagagaggatagctacggggagaagagatagaaactgttcgtcggtctttatc  23104600           <---------ANAC46          --------->ATERF1(1)          <------NtERF2         ------>NtERF2        <---------DEAR3(1)        --------->ETT(2)        ----------->HVH21       --------->ATERF1(1)       <------NtERF2      <---------ATERF1(1)     --------->ALFIN1     <---------DEAR3(1)    --------->ATERF1(1)    <------NtERF2    <-------GAMYB    <---------ABI4(1)   <---------ATERF1(1)   <---------DEAR4(2)   <---------MYB46(3)   <---------DEAR3(2)  <---------DEAR3(1)  <---------DREB2C(2)  --------->ALFIN1 <---------ABI4(1) <------NtERF2 --------->ATERF1(1) ----->NtERF2                          <----------DOF2 ---------ATERF1(1)               ---------->DOF2 ---------DEAR4(2)             ------>NtERF2 ---------RAP2.3(1)            --------->LBD16 ---------ERF1                <---------ETT(1) -------->LBD16              <---------LBD16 --------DEAR3(1)            --------->RAP2.6(3) --------ATERF1(2)        <----------DOF2 ------->DEAR3(1)        <---------ANAC58 ------->ATERF1(2)     <-----------------AGL1 --------RAP2.3(2)    --------->ARR14(2) -------LBD16     ------->TEIL<---------LBD16 ------>ATERF1(1)--------->MYB52(1)    <---------DAG2   ---------->DOF2  <---------ANAC58 XXXXXXXXXXXXXXXX>MIR404 <---------ANAC58          ----------->GT1       <---------ANAC58         *TSS -DOF2------>NtERF2   <---------ARR14(2)   <---------YAB1             <----------DOF2            <---   gccggcggtggcgacggatgaacggttcctttccggcaaagctttttcatagagagagaaaagagagtgagtctttcttgaagaatgagtttgatgagac  23104700                                    <------NtERF2                                   ------>NtERF2                                  <---------bZIP60(1)                               ----------->HVH21                               ----------->TGA1                             <---------ANAC58                       --------------------->WRI1                       <----------DOF2                    ---------->DOF2           ----------->GT1   <---------ANAC58     --------->ARR11(3)      <---------YAB1---------->ID1<---------ANAC46<---------ARR11(3)             <---------AHL20(2) -------DOF2     --------------->AtSPL8       ---------->DOF2                <----------DOF2   tttgaattttgaaaggttttttgttctttattcgtgacgccgaatttcgaaaggtctaagaaaagtccaactatgttttctttttatttgttaattttct  23104800                                                                                                 <---                                                                                                 ----                                                                                          -----------                                                                                         ------->MYC3                                                             <---------TOE2(3)           <-------MYC3            --------->ANAC46                      ----------->GT1       ----------->RAV1(2)     <----       --------->AHL20(2)    <---------AHL20(2)   <------MYB46(1)----------->GT1  <---------ARR14(2)       <---------AHL20(2)   --------->YAB1        <------MYB83 <------ZmHOX2a(1)  --------->ARR14(2)   aagttgtattttattcgccattgaaggaaataaaaatgtatggataatggataggtttatattgaggaggtatctactgagccaaatcccacatgtaaat  23104900                                                  --------->ANAC55(2)                                                  --------->ANAC58                                                  <---------ANAC55(2)                                           --------->ANAC58                                           --------->ANAC46                                           <---------ANAC55(2)                                           --------->ANAC55(2)                           --------->At4g35610    --------->ANAC46                          <---------ARR11(3)  --------->SPL7                          --------->ARR11(3)--------->LBD16                     --------->GLK1(2)     ----------->GT1                    <---------GLK1(2)      --------->ANAC58          <---------AHL20(2)              <---------LBD16 ------ICU4      --------->HSFB2a(2)--------->ZAT14 ----->YAB1    --------->MYB52(1)   <---------ZAT14 >GT1     --------->AHL20(2)------>ZmHOX2a(2)----------->HVH21                                   <--- -----ATHB12  <-----------GT1 <-----------HVH21   --------->ANAC58     <---------YAB1            ----   cataacatttgtttaattaccagaatatgatctgtcattgcagtcccgtaacacgtagttgttttcaattctcatcaatgttactagagctacacaataa  23105000                              <---------ICU4                             <---------AHL20(1)          <---------------AGL15          =========================================================================================MADS_MADS          --------------->AGL15     --------->HSFB2a(2)                                            <-        ----------->GT1      --------->AHL20(1)                                             <--------P ------->TEIL    ----------->GT1    <---------HSFB2a(2)    <--------P                     ----------- ------------AtSPL8     <---------AHL20(2)               ----------->GT1           <---------------AGL15 ----------->AtSPL8     --------->AHL20(2)     --------->AHL20(2)                  --------------->AGL15   atgtaccatgtagtatatatagaaaattaaaaatattactcgaagaaaaaaaaatgaaatggtaagtttttttttttttttttttgtctaaatggtaagt  23105100                                                  <---------ZAT6                                        <---------YAB1                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     <---------AGP1                                     --------->AGP1                                              <---                                     <---------ARR14(2)                                         <----                                     --------->ARR14(2)                                         <----                                     --------->ARR11(3)                                       <------   <---------YAB1      <----------DOF2--------->CCA1(2)                                    <---------ICU4 --------ANAC46  <---------TOE1(2)   <---------ARR11(3)                                   <---------YAB1 >GT1      <---------CCA1(2)       ----------->ARR10                                   <---------AHL20(2)   ttcttataaatgtttatcttatgttctttttgttgataagatctgattagtagtgttttcaaaatacttcatatgcaatactatttgatataatttttgc  23105200  Previous    Next  AGI:  At1g62422.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G12020.1); similar to unknown [Brassica rapa] (GB:ABL97977.1) Range:  from: 23103804    to: 23104698    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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