Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------GLK1(1)                                                         --------->GLK1(1)    <----------DOF2                                     ---------->DOF2 <---------ARR11(1)                              ------->GAMYB                                     <- --------->ARR11(3)                      ----------->GT1--------->ARR14(2)                         -- ---------CCA1(2)                 <---------ANAC58      <---------ARR14(2)                ------>MYB46(1) ---->TOE2(3)              <-----------GT1      <---------MYB52(2)                        ------>MYB83 --->YAB1       <----------DOF2   <---------ANAC58 ------->TEIL                         --------->MYB46(3) ---ATHB12    <---------YAB1  <----------DOF2 <-----------GT1     ----------->GT1       <---------MYB59   tcaaatctttagatttatctttgtgttttatacttttcttgggcagtataacgaaccagatagccgaagagaaatatggtcgtctcatgacccaacttat  23096200                                <---------ANAC58                                        --------->ICU4                               <-------TEIL                                           ===============                           --------->DAG2                                             --------->HSFB2a(2)                         ---------->DOF2                                              ---------------                     --------->TOE2(3)                                      --------->YAB1                   <---------ARR11(3)                                  --------->AHL20(2)                   --------->ARR11(3)                               <----------DOF2  ----------------                  <---------CCA1(2)                    --------->AHL20(2)  --------->AHL20(2)             <---------At4g35610<---------ANAC58      --------->AHL20(1)   <---------YAB1 --------At4g35610--------->GLK1(1)                   <---------AHL20(1)   <---------AHL20(2) ------->At4g35610<---------GLK1(1)             ----------->GT1  <-----------GT1 --------->At4g35610   cagctcttgcaatacatctgatatcttaaaaggtgcatgctcttaccatatagtaatatatatagattaacttttatataattatctgccagaattagtt  23096300                                                                       --------->ETT(1)                                                                     <-----------HVH21                                                                    <-----------RAV1(1)                                                             <---------AHL20(2)                <---------YAB1  --------->ZAT6         --------->TOE2(3) <------NtERF2               --------->AHL20(2)            ---------->DOF2 --------->AHL20(2)     --------->YAB1 <-----------GT1--------------->AGL15    <---------AHL20(2) ==================================================MADS_MADS<---------AHL20(1)               -------- >AGL15    ----------->GT1      <-----------GT1       --------->ANAC46 <---------ANAC46 ----------->GT1 ->AGL2<---------YAB1    <-------TEIL   --------->AHL20(1)  --------->AHL20(2)          <----------ID1   ctatatatcatatttgttaaaattacattcgtttatactacatatattaaagctctacgtaaattattttctgtcggggttttagctatggggaaaaaag  23096400                                                                                                 ----                                                                                              <------                                                                                              -------                                                                                            ---------                                                                                            ------>MYB83                                                                 --------->ZAT6             ------>MYB46(1)  <---------At4g35610           <---------ANAC58               <-----------GT1  ----------->GT1------  --------->At4g35610<---------TOE2(3)              <-----------TBP          XXXXXXXXXXXXXXXXXXXX>MIR319A/B -->DOF2 <-----------GT1        <---------ANAC58 <---------AHL20(2)   <---------YAB1     --------->ANAC46   tctgagctaattaaccatgtattaagtttttttttcttggtttttagttattttttttatatgaataacactctgatttgaactgaaaaaaacccaacga  23096500                    <----------DOF2                   <---------ANAC46                                           ----------->GT1           <------MYB46(1)                      --------->ICU4            --------->ARR14(2)      <---------HSFB2a(1)                  <---------ANAC58               <---------ARR14(2)      <-- --->TEIL  <------MYB83   <---------ANAC58 <---------ANAC55(2)       <---------ANAC58        <------- ---MYB52(2)       <---------ANAC58        --------->ANAC55(2)       ----------->GT1         <------- -->MYB46(3)       <---------ANAC58    <----------DOF2               <---------ANAC55(2) <---------ZAT18 >MYB52(1)<---------AtMYB61    ------->TEIL<---------ANAC46          <---------ANAC58    --------->ZAT18 ->GAMYB  --------->MYB59 <---------ANAC58 <---------ANAC58          <---------ANAC46--------------->AtSPL8   acttaagaaggtttggttatggcttatgggttgcatcttctctttgcgtaatgagttatctatcttcagtttcgtgaatatggctaatttgtgccctttt  23096600                                                                                             --------                                                      <----------DOF2                      ------>NtERF2                                                     <---------DAG2                        --------->LBD16                                                  <---------RAP2.6(3)                     --------->ANAC58                                                  ------>NtERF2                           --------->ANAC46                                                 ----------->HVH21                        --------->ANAC58     <---------ZAT14                             --------->DEAR3(1)                      <---------LBD16     --------->ZAT14                            --------->ATERF1(1)                    --------->ARR14(2) --------->ZAT6                                --------->At4g35610    --------->ANAC46 <---------ARR14(2) --------DOF2                                  <---------At4g35610 ------->TEIL  <----------DOF2 --DAG2                          ---------->DOF2--------->DEAR3(2) --------->ZAT18    --------->GLK1(1) ---DOF2              <---------MYB52(1)   ------>ZmHOX2a(1)       <---------ZAT18    <---------GLK1(1)   ctttcactacagcgtttgacaacccttattttcgacaaagcagtccttgagccgaccttttgccctatgtacgctcaattgtgctttgatatccgccaca  23096700                     --------->DEAR3(1)                                    --------->DAG2                    <---------At4g35610                                  ---------->DOF2                  ---------->CDC5                                    <-----------HVH21                <-----------HVH21       ------>ZmHOX2a(2)          <-------MYC3             ---------     <---------TOE1(2)                 <------ZmHOX2a(2)           ------->MYC3            ----------     <---------TOE2(2)------>NtERF2   --------->ARR11(3)  <---------At4g35610          <---------ZAT14 --->RAV1(1)<---------ALFIN1          <---------ARR11(3)  --------->At4g35610 --------->ALFIN1   aaatgcctaggtttccaccttcagcgcctaagactgatgagatctcattcaagagggttttgctgaacacatgtcaaaaggtgtttgagagaactgacga  23096800                                  <-----------RAV1(2)                                 <------ZmHOX2a(2)                                <---------ARR14(2)                                --------->ARR14(2)                            <------NtERF2                                                --------->ARR11(3)                           <-----------HVH21 --------->SPL7                              <---------ARR11(3)                           ------>NtERF2    <---------ARR14(2)                           <---------ARR14(2)                           ===================RAV                                        --------->ARR14(2)                           ----------->RAV1(1)                                          --------->GLK1(1)                          --------->ANAC46  --------->MYB52(1)               --------->LBD16       <------ZmHOX2a(1)  --------->ANAC58 <------NtERF2                   <---------LBD16       =================================HOX2a_HOX2a                     --------->MYB46(3)<---------HSFB2a(1) >MYB52(1)                --------->ANAC58 <---------SPL7              ------->TEIL     <---------GLK1(1) ->HVH21               ------->TEIL  <------ZmHOX2a(1)            <-------GAMYB       <------ZmHOX2a(1)   cttaagtgaggagattagaaagatgaacgcgccagatcaggaggccgaacgggaagacgaagtaagactgttgaacctccggactctaggaaatcttcgt  23096900                                                                    --------->At4g35610                                     --------->DAG2                 <---------At4g35610                                   ---------->DOF2               <------ZmHOX2a(1)           <-------                    <---------At4g35610                        --------->MYB59             <---------ARR14(2)          <----------DOF2<---------MYB46(3)                  <--------P                    --------->ARR14(2)          <---------DAG2<---------ARR14(2)               <-----------RAV1(2)      <----------DOF2        <---------At4g35610 --------->ETT(2)           <-----------HVH21       <-----------GT1     --   ttttgtggtgagctttttttgaagcggatgttgacagaaaaggttgttttagccattggtcaggttaggaagatgactgtttaactttctctagttccgg  23097000                                                       <-----------GT1                                                 <-----------GT1                <---------At4g35610                                           <---------AHL20(2)                   --------->At4g35610                         <---------ZAT6    --------->AHL20(2)                 <---------ARR14(2) <--- --LBD16       <---------MYB59        <---------YAB1<----------DOF2          <------ZmHOX2a(1)  ----- --------->HVH21   --------->ZAT6----------->GT1 <---------AHL20(2)  <----------DOF2           ------   tctgatgggactacatgcctaacacttgtgttagtgtgttataatttaaatttacttttaccatacagaagcttttggaggatgctgagcaaatgtgtcc  23097100  Previous    Next  AGI:  At1g62410.1    Description:  MIF4G domain-containing protein. similar to eukaryotic translation initiation factor 4F, putative / eIF-4F, putative [Arabidopsis thaliana] (TAIR:AT5G57870.2); similar to eukaryotic translation initiation factor 4F, putative / eIF-4F, putative [Arabidopsis thaliana] (TAIR:AT5G57870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70546.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66650.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain MIF4-like, type 1/2/3; (InterPro:IPR016021); contains InterPro domain MIF4G-like, type 3; (InterPro:IPR003890) Range:  from: 23096580    to: 23097534    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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