Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                           <---------ANAC46                         -                                               --------->ANAC58                                    --                                               --------->ANAC46                                  <---                 <-----------GT1               --------->ANAC58           <-----------GT1        ----            --------->TOE2(3)                 ------>MYB83 <---------ANAC58                    ------            --------->TOE1(3)                 ------>MYB46(1)         <---------YAB1 ------>ZmHOX2a(1)           --------->At4g35610               --------->MYB52(1)       --------->AHL20(2)       <-----       <---------KAN4(2)                    --------->DEAR3(1)        <---------AHL20(2) <---------At4g35610     <------ZmHOX2a(1)                      --------->AtMYB61      <----------DOF2  --------->TOE2(3)   <---------TOE1(2)                    --------->ZAT18    <---------ANAC58         --------->TOE1(3)   actcttaggaataagcttaataccattctcgtattgttcaagagcaccaacgtaatctcttgcttgaaactttttattaccttcttccttaagctcatgt  23090400 ------->MYC2 ------->MYC3 <-------MYC2                                      ------------>AtMYB77 <-------MYC3                                     ----------->HVH21 -------->ANAC58                   ----------->RAV1(1) -------->ANAC58  --------->HSFC1(2)              --------->WRKY38(1)                   <---------ANAC58 ----->TEIL       --------->HSFB2a(1)             --------->WRKY12                      >>>>>>>>>>WRKY18 ------ZAT18      <---------HSFB2a(1)      --------->MYB46(3)                 <---------At4g35610 ----->ZAT18      <---------HSFC1(2)     --------->YAB1    ----------->GT1    --------->At4g35610 --- ->MYC3  --------->YAB1           --------->AtMYB61<---------DOF5.7(2)      <-----------RAV1(2)   <-- --MYC3  <---------GLK1(2)     --------->ANAC46  --------->DOF5.7(2)------>ZmHOX2a(1)   <---------ANAC58   gcacgtttcaagaatatcgaagcatcgaaatcaacaccaccattaacaatcgttgacggtttggataatcctgaagtttcagatgaattgacttgactcg  23090500               <---------ALFIN1               --------->AtMYB61              --------->MYB46(3)            --------->AtMYB61           <---------GLK1(1)                                   <--------           --------->MYB46(3)           --------->GLK1(1)                          <---------AHL20(1)           <---------MYB55(2)          <---------ARR14(2)                          <---------ARR11(3)    <---------ARR14(2)                 --------->ARR14(2)               ---------->DOF2     ---------    --------->ARR14(2)                 <-----------ARR10           <---------------AGL15    <-------- ------>ARR14(2)                  ------>ZmHOX2a(1)               ----------------->AGL3--------->YAB1 -------ARR14(2)        <<<<<<<<<TBF1  <---------GLK1(2)    ------>ZmHOX2a(1)      --------->AHL20(1)   aattcgaattcgaaccaccactcttcttcttccttcctccagatttccccattttcaatctcctctatcccaaaaaaagcttcaaaatattcaaaatcta  23090600                                              ---------->DOF2                                        <---------GLK1(2)                                     <-----------RAV1(2)                                 --------->GLK1(1)    <---------ARR14(2)           --------->CCA1(2)   <----------TaMYB80           --------->ARR14(2) <------ZmHOX2a(2) ---ARR10--------->At4g35610    <---------ARR14(2)--------->ARR11(3) >GLK1(2)<---------At4g35610   <----------TaMYB80 <---------ARR11(3)      <------NtERF2 -ARR11(3)              ---------->DOF2<---------At4g35610    ----------->GT1               ---------   agcgcaaattccgatgaatagatggagaaagggagatacccagatgcttaaagatcgaaatgaagggaaattagtcggagaaatgaagagaaaatggtca  23090700                                                        --------->MYB52(1)                                                       ----------->TGA1                                                       ----------->HVH21                             >>>>>>>>>TBF1           ----------->RAV1(2)                           --                  <----------DOF2                   ------->TEIL                                  ---      ---------->DOF2 <---------TOE2(3)<---------HSFB2a(2)<---------ANAC46                  *TSS <--- -->GT1--------->DAG2 <---------TOE1(3)--------->HSFB2a(2)<---------bZIP60(2)            ---------->DOF2   aattcagataaagttgaatactttaagggaagaagaaggtgctagaagaagatgagcctgacggggttttgaaaaactagaaaccctagctcaaagggga  23090800                                                                                         ------------                                                                                       <---------At4g35610                                                                                --------->ARR11(3)                                       ----------->GT1                          <---------ARR11(3) ------->YAB1                     <---------ANAC58               --------->ARR11(3)    --------->At4g35610 ------>ICU4              <-----------GT1 --------->AHL20(2)     <---------ARR11(3)<-----------GT1 ------KAN4(2)   --------->ZAT14  <---------ANAC58    <------NtERF2             <---------GLK1(2)   atcatcaacttgttgtctctccactattttaccaagtcgtgagataaattttgggccgaagatggaagataatgggcctagagattttcagcccaatggc  23090900                                                  <---------ATHB12               <---------AHL20(2)               --------->ATHB12              ------>MYB46(1)            <------ZmHOX2a(2)            <---------AtLEC2                 ------>MYB83              --------->ARR11(3)          <---------YAB1----------->GT1      --------->AtLEC2          <---------ARR11(3) >CBF  <---------AHL20(2)                 --------->MYB46(3) <---------REM1(1)  --------->AHL20(2)   tgaaaacattttatgcatgaatggatttgtaactagtatcggaaaccatccaaacatgtgatgttgtagactagatcatctataaaattgtatggtctaa  23091000                                                                    --------->AHL20(2)                                                               --------->AHL20(2)      ------->TEIL                                                            --------->TOE1(3)       <---------ATHB12            <---------AHL20(2)                              --------->TOE2(3)   --------->MYB46(3)     --------->ANAC46                                      ----------->GT1    <-----------GT1     --------->ANAC58                                  <---------ARR11(3)  --------->YAB1     --------->ANAC58           --------->ZAT6         --------->ARR11(3) <---------YAB1        -----   actatacaagctatgtaaatggtgtctgtttctaatactatgtaaactagttaacaagatttcgttaaaataaactataataaccaatgaatcaaatcgg  23091100                                                                <------ZmHOX2a(1)                       ------->GAMYB       <---------CCA1(2)   <----------ID1                    <---             <---------ANAC58       ------>MYB46(1)         ---------->DOF2                     -----             <---------ANAC58       ------>MYB83         ------>MYB83                      --------->ANAC58             <---------ANAC46---------->DOF2             ------>MYB46(1)                   --------->ANAC58 ---->At5g28300 --------->ZAT18     -------->P         --------->TOE1(2)            ----------->GT1   taattggaactaattgagtgtccaacgctcacaaagccaacccctaaatctcataaacctacaaaaggacaaaatgtattagaagattgtgaatcgcaat  23091200                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                    ----------->GT1 ------ICU4          ---------->DOF2            --------->ZAT6 ------>ZmHOX2a(2) ---->ICU4---------->DOF2              <---------YAB1  <---------AHL20(2)                    <-------   tttgacaaaaaaaaaagagtgagaaaagaagaagtatagttatctttctaagtctagttaaatgatctacttgttggaacttcaattctaaaccaatgac  23091300  Previous    Next  AGI:  At1g62390.1    Description:  octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT2G25290.1); similar to hypothetical protein OsI_029456 [Oryza sativa (indica cultivar-group)] (GB:EAZ08224.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 23087958    to: 23090792    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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