Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------MYB59                                                                                    <---------DAG2                                                                                    --------->TOE2(3)                                                                                  -------->P        <                                                                               --------->At4g35610 --                                                                               <---------At4g35610<--                                                                               --------->HSFC1(2) ---         --------->ANAC58                                                      --------->HSFB2a(1)---         --------->ANAC58                                                      <---------HSFB2a(1)<--      ----------->HVH21                                              ----------->HVH21 -------->P <--    --------->bZIP60(1)                                        <---------ALFIN1<---------HSFC1(2) ---    <---------bZIP60(1)                                        <xxxxxxxxxxxxxxxxsmallRNA(si3)     --- ----------->HVH21             <---------ANAC58                <xxxxxxxxxxxxxxxxxsmallRNA(si3)    <-- ------->At4g35610             <---------ANAC58         --------->ARR14(2)    --------->ANAC58    --- --------At4g35610         <----------DOF2          --------->At4g35610    --------->LBD16        <-- ->GLK1(2)             <-----------GT1      <<<<<<<<<TBF1    <-----------HVH21--------->ANAC58  ----- ->ARR14(2)        ------>ZmHOX2a(1)     <<<<<<<<<TBF1  <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxsmallRNA(si3) --ARR14(2)        <----------DOF2   ------>ZmHOX2a(1) <------ZmHOX2a(1) <---------LBD16       <-----   gagatgacctcacgctcaatccttttttcctttgcggtccttcttcttcttctcagaggaacccttcacccttgatgcggaagctaccttaccctttgca  22950200         --------->At4g35610         --------->ZAT2      <---------At4g35610      --------->At4g35610     ----------->RAV1(1)   <---------At4g35610   <---------ZAT2   --------->At4g35610   --------->ZAT2  ----------->RAV1(1) -------TEIL ------->ALFIN1 -----MYC4                    --------->At4g35610 ---->MYC4                    <---------At4g35610 ---->MYC3                 ----------->RAV1(2) -----MYC2                 <---------ZAT2 -----MYC3                 --------->At4g35610 ---->PIF4                 <---------At4g35610                                                   <--- ---->PIF5              <---------ZAT14<-----------------AGL1                                    <--- -----PIF4     <---------ANAC58        ----------->RAV1(2)   <---------HSFB2a(2) <---------ANAC58<--- ---->MYC2     <---------ANAC58  ------>NtERF2               --------->HSFB2a(2) <---------ANAC58<--- -----PIF5 <----------DOF2 --------->ZAT2       --------->At5g28300              ----------->HVH21  < ------->OsbHLH66       --------->ZAT14--------->At4g35610------->PIF5       <---------ANAC58 ------- -------OsbHLH66  <-----------HVH21  <---------ALFIN1     <-------PIF5       <---------ANAC58--------   cgtgcagcagcagctttgcgagtcactgcagctgcagcctcacctgtagcggtagaagcacttgcagaagaaactcttgccttgcgacccttggcagtga  22950300                                                                                              <------                                                                                              -------                                                                                           <---------At4g35610                                                                                           <---------ZAT2                                                                                           --------->At4g35610                                                                                          <----------    <---------At4g35610                                                                 --------->At4g35610    <------NtERF2                                                                       <---------ZAT2    --------->At4g35610                                                                 <---------At4g35610  --------->ZAT18                                                                   <---------ALFIN1 ------bZIP60(2)                                                                 --------->ANAC58 ------ANAC58                                                                    --------->ANAC46 ------ANAC46           <----------DOF2                  ----------->GT1         --------->ANAC58 ------ANAC58        <---------ALFIN1            <----------DOF2               <---------DOF5.7(2) -----------HVH21 --------->TCP20               <----------DOF2                --------->MYB52(1) ---->HVH21       --------->TCP16(1)     ----------->RAV1(2)           <---------YAB1  <-----------RAV1(1) ->At5g28300   --------->ALFIN1          <------NtERF2   <---------MYB46(3)  <---------MYB52(2)   ---   cttgtccgctggtaaatgtggagccactttcgaatgcattggcccctgggcctttgggattgttaaaaccattagcatagctaacgacactgctgctgct  22950400                                                                                                    <                         --------->ZAT2                                                             <                         <---------ZAT2                                                             <                         <---------At4g35610                                                   ------                    <---------At4g35610                                                        <-----                    --------->At4g35610                                                        <-----                    --------->ZAT2                                                             <-----          <---------At4g35610                                                                <-------          <---------ZAT2 --------->At4g35610                            <------MYB46(1)     ---------          <-------GAMYB  --------->GLK1(1)                      <-----------------AGL1      ---------       ----------------->AGL2                                   <------NtERF2               --------- ---At4g35610       <---------ZAT2                            --------->ZAT18    <---------ETT(2) --- -->At4g35610    ---------->DOF2                            <---------ATERF1(1)  <---------ZAT18  --- -RAV1(1) --------->At4g35610                      --------->HSFB2a(2)  <------MYB83   --------->ARR11(3) ------->DOF2 <---------HSFB2a(2)   <----------DOF2<---------HSFB2a(2) --------->MYB59 <---------ARR11(3)   gaaagttgagccagttgcagaaagctgagctccaatgcctttggtagtcgtttttggaagagaggcccctaatttggtctctgtggacaaatctttgacc  22950500       ----------->HVH21      --------->At5g28300    <---------ANAC46 ---------ANAC58 ---------ANAC58 ----------DOF2 --->At4g35610 ----ANAC58                     --------->YAB1 ----At4g35610                 <---------ATHB12 ----ANAC58                  --------->WOX13(1)        ---------->ID1 --WRKY18(1)             --------->ANAC58          <----------DOF2   <---------YAB1 -->HVH21                --------->ANAC46        <xxxxxxxxxxxxxxxxxxsmallRNA(si3) >WRKY38(1)              --------->ANAC58    --------->ANAC58     <----------DOF2 >WRKY12            --------->ANAC46         --------->ANAC46 --------->YAB1 --->MYB83        --------->ANAC58           --------->ANAC58<-------TEIL --->MYB46(1)     --------->ANAC58   ---------->DOF2 <-----------RAV1(1)                 <---------YAB1   tgccttgcggtgacaatggcacacaaaacgccaatcacgagaagcacaagaaactttgtggcattcatcttttgattttttggattagattgtgtttgtg  22950600                                                                             <-------TEIL                                                                         <---------YAB1                                                                       --------->YAB1                <<<<<<<<<TBF1                                         <---------YAB1              *TSS                     <-----------TBP              <---------AHL20(2)         ------        <---------ANAC46   --------->YAB1                          --------->AHL20(2)          ------     <-----------RAV1(1)  <---------ATHB12                         --------->ICU4  ------->TEIL------   gtgagttatgttgtgttcttcttcccaaatcatagacctctatatatacaaaaactcgatacacttgtatttattatgatacatgaacatttcttacaag  22950700          --------->TOE1(3)                                                                  <-------          --------->TOE2(3)                                                              <---------AHL20(2)         --------->At4g35610                                <-----------GT1             --------->AHL20(2)   <-------TEIL            --------->YAB1                  <-----------GT1   <------ZmHOX2a(2) --->ANAC58        <----------ID1    ------>MYB83         <---------AHL20(2)--------->ARR11(3) --->ANAC58        <---------YAB1    ------>MYB46(1)     --------->YAB1     <---------ARR11(3)      < --->ANAC46      <-----------GT1     -------->P <---------YAB1<---------ALFIN1    --------->YAB1    -   aaatatacataagcttaaattacgactaatagtcataccaacatgtcaacatgatactattttaacacctcttgccaagatcaaacacaattttatctaa  22950800                                       <---------ZAT14                                --------->AHL20(2)                                <---------AHL20(2)                                <---------ICU4                               <---------ATHB12                               --------->AHL20(2)                        <---------GLK1(1)       <---------YAB1<---------YAB1    --------->ZAT14 ------>ZmHOX2a(2) --MYB59  <---------YAB1--------->GLK1(1)    <---------YAB1 ---------STY1(2)  ----------->GT1 <-----------GT1   --------->ARR11(3)             <-----------GT1 -------->STY1(2)<---------GLK1(2) --------->ZAT6    <---------ARR11(3)       <---------AHL20(2)   ctagctaatattatgaatagattgtgatatccaattaatactatactataactgtgatctcttattcgaaaacctcttaattcatttttccaacttctga  22950900                                                     --------->ANAC46                                            --------->MYB46(3)                                            <---------MYB111(2)                                            <---------MYB111(1)                 --------->ARR14(2)                                           ------>MYB83---------->DOF2          <---------ARR14(2)                                           ------>MYB46(1)                 <---------YAB1                                         --------->AtMYB61                --------->TOE2(3)                                         <---------MYB111(2)             <--------HAHB4                                         --------->MYB46(3)              --------->YAB1                                         <---------MYB111(1)             <---------ICU4      <-------                                   --------->ANAC46  --------->ANAC58   ===================HOX2a_HOX2a                           --------->AHL20(2)        --------->ANAC58   <------ZmHOX2a(2)--------->YAB1                           <---------AHL20(2)------->GAMYB--------->HSFB2a(1)   --------->ARR11(3)                 <-------TEIL  <-----------GT1--------->MYB52(1)        <---------YAB1--------->WOX13(1)          ----------->GT1 <---------AHL20(2)<---------MYB52(2)        ------->GAMYB--------->TOE2(3)         ----------->GT1  <---------AHL20(1)<---------MYB46(2)        --------->YAB1------>ZmHOX2a(1)     --------->YAB1       --------->AHL20(2)<------------MYB.PH3(2)  --------->MYB46(3) <---------ATHB12    <---------ATHB12  --------->AHL20(2) <---------MYB55(2)<---------GLK1(2) --------->AHL20(2)  --------->WOX13(1)  <---------AHL20(2)--------->MYB46(3)<---------HSFB2a(1)<---------AHL20(2)    <-   ctctcaatcaagagttaaatacatataatttttttacaatccaccaactaactacaagaaaggttctcacaacgatcattaaaatcctcaatcagggtca  22951000                                                                                                  <<<                                                                                                <----                                                                                                -----                                                                                              -------                                                                  --------->ANAC46           <-------                                                                 --------->LBD16             <-------                                                       --------->YAB1                      --------->WOX13(1)                           <---------WOX13(1)          <---------ICU4                   --------->ANAC58    <---------YAB1      ------>ZmHOX2a(1)         <---------AHL20(2)                    --------->ANAC46  <----------DOF2      <---------MYB59 ------->TEIL   <---------ATHB12                  --------->ANAC58 ----HVH21   <---------MYB52(2)        --------->GLK1(2)       <---------LBD16        ---------->DOF2 --------ALFIN1---------->DOF2      <---------YAB1--------->AHL20(2)       --------->GLK1(2) --------   tccactttgattccaactaaagcttcctaattgaaaatatgaatctgaaaatataaatcataacttccgcacaatagaatccaaacagacaagcaattat  22951100  Previous    Next  AGI:  At1g62080.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G62000.1) Range:  from: 22949907    to: 22950614    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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