Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ANAC58                                       --------->ANAC58                                      <------NtERF2                                     ------>NtERF2                                    ----------->HVH21                                    --------->DEAR3(1)                                 <---------SPL7                                --------->MYB46(3)                                --------->DEAR3(1)                                <---------MYB55(2)                                 <---------At4g35610                                <---------ATERF1(2)                                --------->At4g35610                                --------->ATERF1(2)                              <-----------RAV1(2)                              --------->MYB52(1)                               ----------->RAV1(1)                             --------->AtMYB61                                --------->DEAR3(1)                             <---------ALFIN1                                 ------->GAMYB  <-------                             --------->DEAR3(1)        ------>NtERF2          --------->ANAC46      <  <---------HSFB2a(2)       --------->MYB46(3)         --------->LBD16       --------->DEAR3(2)     <  --------->HSFB2a(2)     <-----------GT1              <------NtERF2         --------->MYB46(3)     < -------->AtLEC2        --------->ARR11(3)      --------->DEAR3(1)           <------------AtMYB77 <-- -->ARR14(2)      --------->ANAC58 --------->DEAR3(2) --------->DEAR3(1)     <---------MYB55(2)   <-- ---ARR14(2)      --------->ANAC58 --------->SPL7<---------ATERF1(1)        <---------At5g28300   <-- ---MYB.PH3(1)    ----------->GT1--------->ORA47(1)--------->ANAC46        --------->MYB52(1)<-------   ccatccagaagcattctgtaacgaaatatcaccaccggccgacgaaatcgccctcgccgcgaacaaatcgtcgagtctaaccgccagatgaagaggcgtt  22942300                                           ------>ZmHOX2a(2)                                       ----------->ARR10                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    <---------AGP1                                    <---------ARR14(3)                                           ----                                    --------->ARR11(3)                                          -----                                    <---------ARR11(3)                                          <----                                    --------->ARR14(2)                                          <----                                    --------->AGP1                                             <-----                                    <---------ARR14(2)                                         ------                                   <---------GLK1(1)                                           <-----                                   --------->GLK1(1)                                           ------                                  ----------->ARR10                                   ===============                                 <------NtERF2                                        ------>ZmHOX2a(2)                               <---------DEAR3(1)                                     ===============HOX2a_HOX2a                               <---------ANAC46                                      ================HOX2a_HOX2a                              <---------LBD16                                        <------ZmHOX2a(2)                            --------->ANAC46                                         ================  ----------->HVH21         --------->ANAC58 --------->LBD16                        <---------AGP1 --ANAC58                   <---------DEAR3(1)--------->ANAC46                      --------->ARR14(2) ---------ANAC46            --------->ANAC58--------->ANAC46                        <-----------ARR10 ---------ANAC58        --------->ANAC58   <---------LBD16                          <---------ARR14(2) ---------ANAC58        --------->ANAC58 <---------ARR14(2)                        <---------CCA1(2) -------ANAC46        ---------->DOF2--------->CCA1(2)                    --------->GLK1(2)    <----- -------ANAC58       --------->WRKY18(1) --------->ARR14(2)              --------->ARR14(2)    ------ -------ANAC58      <-----------HVH21<---------At4g35610                 <---------GLK1(2)    <------ZmHOX2a(1) --ANAC58      ----------->HVH21--------->LBD16------>NtERF2             <---------ARR14(2)   <------   tcgcgtgaaggaacgtcgcgacggtcaagcacggcggagatctgatccgcgactcgctcttgactcagtgagtcggattctgttcggatctgttcaggat  22942400            --------->ANAC58        <---------HSFB2a(2)        --------->HSFB2a(2)   --------->ZAT2   <---------ZAT2  <---------TOE1(2) ------>ZmHOX2a(1) -->ZmHOX2a(2)                               ------>ZmHOX2a(2) ---->GLK1(1)                               <---------GLK1(1) -----GLK1(1)                               --------->GLK1(1) --ZmHOX2a(2)                               --------->At4g35610 ----ARR11(3)                               <---------At4g35610 --->ARR11(3)                              <---------ARR11(3) ----ARR14(3)                              --------->ARR11(3)          <---------ZAT14 --->ARR14(2)                            <---------MYB52(1)            --------->ZAT18 =======HOX2a_HOX2a                <---------ZAT18          <---------ANAC46 =======HOX2a_HOX2a                --------->ZAT18         <------NtERF2 ----ARR14(2)                      <---------ZAT14        ------>NtERF2--------->ZAT14             <- --->ARR14(3)                      --------->ZAT14       <---------DEAR3(1)                 --------- ---GLK1(2) --------->ANAC58 <-----------HVH21         --------->MYB52(1)                 <---------LBD16   ctcctagcttcggcaaggaagagagaagacgagtcagtgcaccgtgatctcccaaaacgacggcgtaatgaactggactgtgagagtaatcttccggtct  22942500                    <------NtERF2                   ------>NtERF2                  --------->DEAR3(1)                 --------->ORA47(2)                 --------->ATERF1(1)                 --------->RAP2.3(1)         <---------HSFB2a(2)                ------>NtERF2                <---------ANAC46                <---------ATERF1(1)          --------->HSFB2a(2)          ------>ZmHOX2a(1)               --------->ANAC46       <---------WOX13(1)                 --------->TOE2(3)              --------->SPL7        --------->ATHB12             <---------MYB59              --------->ATERF1(1)   <---------ICU4               <---------MYB111(1)      <---------MYB46(3)           --------->ICU4                <---------MYB111(2)      <-----------RAV1(1)     --------->ANAC58                   <------------MYB.PH3(2)           <-     <---------MYB52(1)      <------NtERF2  <---------LBD16      <---------MYB52(2)             <----    <-------GAMYB<------NtERF2--------->ANAC58--------->LBD16    <---------MYB46(2)       <---------YAB1 --------WOX13(1)--------->DEAR3(2)<---------YAB1          <-----------ARR10         --------->ATHB12 >LBD16      <---------ATERF1(1)------------>ATHB5         --------->GLK1(2)  ---------->DOF2--------   aattgccgttgttgcagacgccgacgaaggccgagccatgattgtttccggagagattgagaatctaactaacttcctcaaaaagagtgattgtgattct  22942600            <<<<<<<<<TBF1         <<<<<<<<<TBF1  <<<<<<<<<TBF1      <<<<<<<<<TBF1  <<<<<<<<<TBF1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <<<<<<<<<TBF1  <<<<<<<<<TBF1                           --------->ANAC58 --------YAB1  <<<<<<<<<TBF1        ---------->ID1        --------->ANAC58               --------->ARR14(2) -----YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->At4g35610                   *TSS ->ICU4<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------At4g35610             <-----------GT1  <   tattcttcttcttcttcttcttcttcttcttctagttcgtcttcttcgattgaagctgaaacggaatgtttttggaaatgggatgttacagaattcgaag  22942700                            <---------AHL20(2)            <---------AHL20(2)                                                  ----------->TBP   <--            --------->AHL20(2)          <---------AHL20(2)               <---------AHL20(2)==========           <---------AHL20(1)          <---------YAB1                    --------->AHL20(2)----------           --------->AHL20(2)        --------->YAB1                  --------->AHL20(2)    <---------           <---------AHL20(2)       --------->AHL20(2)           <---------TOE2(3)        <----------      ------------>CBF <---------AHL20(2)       <---------AHL20(2) <---------GLK1(2)      =========== ---------AtMYB61  <----------DOF2  <---------AHL20(2)    <------------CBF--------->AHL20(2) <-------   ttgtggtgagcaatttaattccttttttatttcattcatttattatttgttttatttgtttattgtttagattatttaaaatataaaaactctctttatt  22942800                                    <---------RVE1(1)                                   --------->ARR11(3)                                   <---------ARR11(3)                                  <------ZmHOX2a(1)     <---------O2                ----------->GT1     <---------TGA1a            <---------TOE2(3)     <---------ANAC58          --------->YAB1     <---------ANAC46          <---------ICU4     <---------ANAC58         --------->ICU4    <------NtERF2        --------->YAB1                               <---------AHL20(2)  <---------DEAR3(1)     --------->ANAC55(2)                          --------->AHL20(2) -------LBD16            <---------ANAC55(2)              <---------ZAT14 ==============bZIP_DOF  ----------->GT1                  --------->ZAT14 ----->AGL15            <-------TEIL<---------CCA1(1) --------------->AtSPL8 -DOF2                 --------->GLK1(2)              --------------->AtSPL3                       <- -------AGL3          <---------GLK1(2)        <---------DAG2      <----------DOF2       ------------ ==================================================================================================== --AHL20(2)         ----------->ARR10          <----------DOF2<----------DOF2   <----------DOF2    <-   tggggaggcgtgagtgagagaagagattcgtaataaggatatttctgggctttttgtcagtactcttttcttttaatttcttctttgttttcttatttga  22942900       <----------DOF2                   <-----------RAV1(1)     ---------->ID1             <------------------------ANAC81 ---------DOF2                 <------------------------ANAC81 --->AGL15<-----------GT1<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 --------->AHL20(2) ====MADS_MADS          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               --------->YAB1        <----- --------DAG2           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------REM1(1)   --------->ATHB12   gctttttgtcttttacattatagttttttttttttttttttttttgttggattttaggtgtttttttgtaatgtagcataaattagaacatcatgggctt  22943000                                                                                  --------------->AtSPL8                                               <---------AHL20(2)                 --------------->AtSPL3                                              --------->AHL20(1)                  <---------------AtSPL8                                              --------->ARR11(3)               <---------ICU4                                              <---------ARR11(3)              --------->ICU4                                              <---------AHL20(1)            <---------ICU4                                              <---------AHL20(2)            --------->YAB1                                     <------MYB46(1)  <---------WOX13(1)   --------->ICU4                                <---------YAB1--------->AHL20(2)           <---------YAB1                    --------->ATHB51 <------MYB83   --------->ATHB12     --------->YAB1    --------->TOE2(3) -----DOF2         <---------YAB1--------->ATHB12  <---------AHL20(2) ----------->GT1   <----------DOF2   ttttttaaaacaaaaatacacattattgtatttgatgataggttgaaatatatttgattgatgtgaagaattttgttataattagtagtactttcttaaa  22943100                                                                           <---------YAB1                                                                         <--------HAHB4                                                                         <---------ICU4                                                                         <---------AHL20(2)                                                                         -------->HAHB4                                                                         --------->ATHB51                                                                         -------->ATHB1                                                                         --------->YAB1                                                                         --------->ATHB12                                                                        --------->ICU4                                                                        <---------YAB1                                                                        <---------ATHB51                                                                      --------->YAB1               <-----------GT1                                        <---------ICU4              ----------->HVH21                     --------->ATHB12 <---------AHL20(2)             <-----------HVH21                      -------->HAHB4   <---------ATHB51            <---------bZIP60(1)                     --------->YAB1   --------->ICU4            --------->bZIP60(1)                    --------->ICU4    --------->AHL20(2)          <---------At4g35610                    --------->YAB1   --------->AHL20(2)   --------->ATHB12                       <---------WRKY18(1)    --------->AHL20(2)   --------->ATHB51                      --------->WRKY38(1) --------->AHL20(2)             <--------   <---------AHL20(2)                 --------->ATHB12       <---------AHL20(2)         <---------YAB1   --------->AHL20(2)                <---------YAB1<---------YAB1<---------AHL20(2)   --------->YAB1  <---------AHL20(2)     --------->YAB1 <---------WOX13(1)   --------->AHL20(1)      <---------YAB1   caaaattatttgagatgtcacagtttatagtgatgactcatggttgactagtaatgatagaaataaaataaataattattagtgactatcatggttgtcg  22943200  Previous    Next  AGI:  At1g62050.1    Description:  similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G11740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21232.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 22939792    to: 22942689    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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