Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------AHL20(2)                                                                --------->AHL20(2)                                                             <---------ICU4                                                          ------>MYB83                                                          ------>MYB46(1)                                                        --------->AtMYB61                                                        <---------MYB59   --------->ARR11(3)                              <---------------AtSPL8 ------->GAMYB        <---------ARR11(3)                              --------------->AtSPL8--------->MYB46(3)   --------->GLK1(1)          -                            <---------GLK1(2)    <---------WRKY38(1)     <---------GLK1(1)       ----      ---------->DOF2     ----------->ARR10------>ZmHOX2a(1)<---------ATHB12          <-----------HVH21   tttttgagtaaagaagaagttttgagactagatttgtacataatcctctgatcaacgaccaaatcattttatatgatatcttctcaaatgtcactcgaac  22822900                                       <---------ICU4                                      <---------YAB1                                    --------->YAB1                              ------>MYB46(1)                              ------>MYB83<---------ICU4                            <---------MYB59                    --------->YAB1                         --------->MYB52(1)  <-----------GT1  <---------YAB1                 <---------ICU4    <---------YAB1  <---------AHL20(2)         <---------MYB52(1)    -        <-------TEIL--------->MYB52(1)--------->ICU4      ------->TEIL<---------ICU4             <--- -------->REM1(2)--------->YAB1  --------->YAB1 --------->TOE2(3)<---------YAB1     <---------AHL20(2) ------->GT1    <---------ATHB12--------->MYB46(3) --------->AHL20(2)<---------ATHB12<---------AHL20(2)   tgtgtaaacattcgtttaatcataacgaaaccgaaccatcataattttcacattaaaatgaaccattataaatcatttctgttttttttattttctctaa  22823000                           <---------AHL20(1)                           --------->AHL20(2)                           --------->AHL20(1)                           <---------AHL20(2)                          <---------AHL20(2)               --------->ARR11(3)               <---------GLK1(2)              --------->ANAC46               <---------ARR11(3)             --------->ANAC58                          --------->YAB1    --------->ANAC46      --------->AHL20(2)  --------->ANAC58                      <---------MYB46(3) -------->DOF5.7(2)     --------->YAB1    ------>ZmHOX2a(1)                        --------->ALFIN1 ------ATHB12<---------TOE2(3)           --------->TOE2(3)   <---------DAG2      <---------ANAC46  <-   tcgtttacgaaaatttagatttttaaaaataaattgctaaattcctaaacgcattctagtccaatttttgaacagttgtattggagtggatgataactag  22823100                <-------GAMYB               --------->MYB111(1)               --------->MYB52(2)                   <----------DOF2               --------->MYB111(2)                 --------->TOE1(3)               <---------MYB46(3)                  --------->TOE2(3)               --------->MYB55(2)            --------->TOE2(3)                --------->ANAC55(2)              <--------P                    <---------ANAC55(2)               --------->ANAC46 --------DOF5.7(2)                       <------ZmHOX2a(2)       <---------YAB1                    --   taaacgaatggaattggtagttgaactaaaactcgtggaatggatcacctaaacctttaactaatttcttattgtcttatacataacatcggtaaacaaa  22823200                                                                                           <---------WOX13(1)                                                                                          <----------                                                                                         <-----------                                                                                         --------->ATHB12                                                                                         <---------ICU4                                                                                         --------->ATHB51                                                                                         --------->YAB1                                                                                         -------->ATHB1                                                                                         <--------ATHB1                                                                                        <---------ATHB12                                                                                        <---------ATHB51                                    <---------GLK1(1)           <---------ARR11(3)      --------->ICU4                                    --------->CCA1(2)           --------->AHL20(1)   ------------>ATHB5                                   --------->ARR14(2)           --------->ARR11(3)  ------------>CBF                                   <---------ARR11(3)      --------->AHL20(2)  --------->ARR14(2)                                   --------->ARR11(3)    <---------MYB52(1)    <---------ARR14(2)             <---------YAB1      ----------->ARR10      <-------GAMYB         <---------CCA1(2)         --------->ZAT14   --------->ETT(1)             --------->LBD16    <---------AHL20(2)     --------->ZAT6      <-----------HVH21             ----------->GT1    --------->AHL20(2)     *TSS --------->GT1        ------>ZmHOX2a(1)      <-----------GT1   --------->AHL20(2)  ------>ZmHOX2a(1)   actgtaaacactattctccttgtccttggtcggataagatattcgtttttctgttttccgttaaaatatatacaaattttatatcctccaataattgatc  22823300                    <---------AHL20(2)                   <---------YAB1 --------->ZAT6    --------->AHL20(2)         <-----------GT1   <---------ARR11(3)      <---------AHL20(1)                         ---------->ID1   <---------AHL20(1)   <---------AHL20(2)                        <----------DOF2                 ---   --------->ARR11(3)   --------->AHL20(2)                     <-----------GT1                  ----- --CBF            --------->AHL20(2)      <----------DOF2   <---------DAG2                      ----- -ATHB5    <----------DOF2 --------->AHL20(1)         ------>ZmHOX2a(1)                   --------->TOE2(3)   aagaatatatatactttcatttttatttatatattaccactactctttcatgtctccttccaatttttctttgtcttcaaatactattccaatctcaaac  22823400                                                                                                   --                                                                                                 <---                                                             <---------GLK1(2)              <--------           ---------->ID1                            <---------ICU4                    <---------ANAC46     <---------ARR14(2)                              --------->YAB1                    <---------ANAC58 ------->DOF2              <<<<<<<<<TBF1          --------->WOX13(1)                   <---------ANAC58 ---->ANAC58          <----------DOF2        ------>ZmHOX2a(1)   <----------DOF2  --------->ATHB12 -- ---->ANAC58   <----------DOF2       --------->YAB1 <---------ATHB12             <-------TEIL <------   gaaagagtattttgtctcttttctctttcttcttcattttcatcatcctcttcaatcatctctgattcttttcttctgttcgattcattgcgttctttac  22823500                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                   <-----------RAV1(1)                                                                                  <---------YAB1      <----------DOF2                                                          <---------YAB1 ---->MYB83                                                                    <---------AHL20(2) ------MYB59                            <---------YAB1      <----------DOF2 <---------RVE1(1) --DOF2                  --------->ARR11(3)<---------HSFB2a(2)             --------->ARR11(3) ------- ---->MYB46(1)           <---------ARR11(3)--------->HSFB2a(2)             <---------ARR11(3) <------ -----GT1<---------AtMYB61   --------->At4g35610 --------->ALFIN1          <---------GLK1(2)  <------   caaattttcttttggtcttgttaacaatatcatcttacattttttatagaagtgtttcagttctttataagtagacagatttttattgttgcgtcggatt  22823600                                                                ----------->GT1                                                        <-----------------AG                                                        =============================================                                                      --------->ANAC46   <---------AtLEC2                                   ----------->HVH21 -->ARR14(2)              <----------DOF2             <---------ETT(1)   >>>>>>>>>GATA-1 ---GLK1(2)      <-------TEIL        <---------ARR11(3)------>NtERF2   ----------->GT1 ---ARR14(2)    --------->CCA1(2)    --------->ARR11(3)----------->RAV1(1)      --------->TOE2(3)   cttgagcatggctacaagattcaaggggctttataacaagagcttcaaatgtttctccgacatttttggtaaatagataaaacctctaatcttgtttagt  22823700                                -------->HAHB4     <---------AHL20(2)         --------->ATHB12     --------->AHL20(2)         <---------ICU4                             <------ZmHOX2a(1)   --------->TOE2(3)            --------->YAB1                          <------ZmHOX2a(1)   <----------DOF2             <---------ATHB12                       --------->ALFIN1   --------------->AGL15       <---------YAB1   <---------AHL20(2)   <------ZmHOX2a(1)   <---------------AGL15       --------->ICU4   --------->AHL20(2) --------->ALFIN1  <-----------------AGL3<----------DOF2    ----------->GT1   --------->ALFIN1                 ------- ==================MADS_MADS  <---------TOE2(3)--------->AHL20(2) <------ZmHOX2a(1)       <---------GLK1(1)   tttatctttaaatggacatgaataagctttctaatgattacaaaatggattaaatttgtagatgtggaggaggaggaggagatggaaattggttatccga  22823800  Previous    Next  AGI:  At1g61795.1    Description:  similar to RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10) [Arabidopsis thaliana] (TAIR:AT4G04900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69681.1); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 22823297    to: 22824694    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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