Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->YAB1                       --------->At4g35610                               --------->AtMYB61                   ---------->DOF2      ----------->GT1       --------->ANAC46                      --------->AHL20(2) ----->P                 <------ZmHOX2a(2)                    <---------------AGL15        <---------TOE2(3) ----->WOX13(1)         <-----------HVH21            <-------TEIL<---------ATHB12          <---------TOE1(3) ----ATHB12            <---------At4g35610   --------->ANAC46----------------->AGL3  <xxxxxxxxxxxxxxx   aaccagttcggaaaaacaagattacagatcacaccaatactaactccaagaagcatacatggttccaataaaagagctaaatcgaagtcgattagggttt  22804300                                                    <------ZmHOX2a(2)                                                   --------->ARR14(2)                                            --------->At4g35610                                           --------->MYB52(2)                                         --------->DOF5.7(2)                                         <---------MYB52(1)                                       --------->ANAC46                                       ========================================bZIP_DOF                                       --------->bZIP60(2)                                       --------->ANAC58                                       <---------TGA1a          --------->TOE2(3)                                       --------->TGA1a          --------->YAB1                                       <---------O2--------->ARR11(3)           <---------TOE1(3)           --------->ANAC58         --------->TOE1(3)           <---------TOE2(3)           --------->O2<---------ARR11(3)       --------->CCA1(2)              <---------TOE2(2)   --------->ANAC46      --------->ARR14(2)        <---------ANAC58   --------->AGP1   ---------->DOF2   --------->At4g35610      <---------ARR14(2)        <---------ANAC58   <---------ARR14(2)                 <---------At4g35610 ------>NtERF2      <---------TOE2(3) <---------TOE1(2)----------->RAV1(1)    --------->GLK1(2) xxxxxsmallRNA(se3)--------->MYB52(1)<---------ALFIN1--------->MYB46(3)--------->At4g35610  <--------   tgccaccagatttagggtttctaacgaatagattgcatcccacgttagctatagatccaccagtaaccataaaagctgagaagcttgaagctgtctttag  22804400                                                        <---------DEAR3(1)                                                        --------->ATERF1(2)                                                        <---------ATERF1(2)                                                        --------->DEAR3(1)                                                  --------->ARR14(2)                                                 <---------ARR14(2)                                               --------->DEAR3(1)                               <----                                             --------->ABI4(1)                                  -----                                             ------>NtERF2                                      <----                                            ------->GAMYB   ------>NtERF2                       -----                                            --------->DREB2C(2)                                <-----                                            --------->DEAR3(1)                    ---------->DOF2<---                    <---------YAB1         --------->MYB46(3)                    <------ZmHOX2a(1)<--                    --------->ICU4         --------->DEAR3(2)       <---------WOX13(1)         ------                 <---------YAB1           <---------ATERF1(1)<-------GAMYB   --------->TOE1(2) ------      --------->ANAC46                   --------->AtMYB61  <---------MYB46(3)   ====================    --------->DEAR3(2)                   <---------ALFIN1--------->LBD16<---------REM1(1)      <----- --DOF2    <---------YAB1             --------->AtMYB61--------->DEAR3(2)  ------->TEIL       <------   atcgagaccggccacgattgtcattatcggaacatataaacctccaccgccgattccaccggcgcttgagattgatgaagctaggaaagagagtaagccg  22804500      <-------GAMYB     <---------MYB46(3)     ------>ZmHOX2a(2)             <---------ANAC46    <---------YAB1                 <-------GAMYB <---------YAB1                   <------MYB83 --------->ICU4                   <---------MYB46(3) -----ATERF1(1)                   <------MYB46(1) ->NtERF2                         --------->MYB55(2) -----DEAR4(2)                   --------->MYB111(1) ---->LBD16                      <---------MYB46(3) ----ATERF1(2)                   <---------AtMYB61 ---NtERF2                      <--------P -------DEAR3(1)               <-------GAMYB --->ATERF1(2)                --------->ATHB12                                            <---------LBD16 --->DEAR3(1)     --------->MYB52(2)                                                    ------>ZmHOX2a(2) ===========HOX2a_HOX2a <---------GLK1(2)                                               --------->ETT(2) ----DEAR3(1)   <---------MYB52(1)--------->MYB52(2)                            ===============HOX2a_HOX2a ---LBD16 <---------TOE2(3)   <---------MYB46(3)            --------->CCA1(2)   <------ZmHOX2a(1)   gcgatgatcgttgatgttgttagttcgattcttggttggttgaattttgttgaaaaatcgaggtatgagcttgttttgttgaggagttgatcgacgggag  22804600            <---------ANAC58            <---------ANAC58           <-------TEIL                                           --------->ANAC58          --------->ARR11(3)                              --------->YAB1        <---------HSFC1(2)                                --------->ATHB12        --------->HSFB2a(1)                              <---------YAB1        --------->HSFC1(2)                        <------ZmHOX2a(1)       <---------TOE2(3)  --------->ATHB12   <---------YAB1       --------->ANAC58          <--------       <---------TOE1(3)<---------WOX13(1)   <---------REM1(1) <----------ID1      <---------AHL20(2)   aaagaattgaaggttcttgttctgcgattgatggagtcaagaagatgatgaaggagagaattatagggacgaaattgtttctcatttttttgtttggggg  22804700                                                                                <-----------TBP                                      *TSS                                    --------->AHL20(2)                                    --------->ARR11(3)                        <-----------TBP                                    <---------ARR11(3)                      <----------DOF2                                 <------ZmHOX2a(1)                       --------->ZAT6        <----------DOF2   --------->ARR11(3)                 <-----------GT1<---------DAG2          - -LBD16 <---------DAG2    <---------ARR11(3)          ------->TEIL     <-----------GT1         <-----   ttttggttaactttttaaaagtttgggagattttaggagatgttgggatttttatgtatgttatttctgtttataacactttatatatagccatatagga  22804800                                              <---------AHL20(2)                                         --------->AHL20(1)                                         --------->AHL20(2)                                         <---------AHL20(1)         <---------ANAC46                <---------AHL20(2)         <---------ANAC58                --------->ARR11(3)         <---------ANAC58                <---------ARR11(3)        --------->ATHB12                --------->AHL20(2)                          ---------->DOF2       <---------YAB1                 --------->AHL20(2)                       ----------->GT1     -- -------->ALFIN1            ----------->GT1  --------->AHL20(2)               ----------->GT1  <----- -ZmHOX2a(1)  <------------CBF      --------->AHL20(2)                ---------->DOF2   <----------ID1   gagtgtgtgatgcttggattgtcaagtagaaagaaaaaaaaaatatattaaatagaaatagaaatagaaatagaaagaagaagataaaaagagacaaatc  22804900                                                        <---------YAB1       <---------ANAC55(2)                                                     --------->ICU4          --------->ANAC55(2)                                                    <----------DOF2     <---------ICU4                                               --------->ALFIN1         --------->AtMYB61                                             <-----------RAV1(1)     --------->ANAC46                                       --------->ARR11(3)   --------->MYB52(2)          --------->ALFIN1   <-----------GT1 <---------ANAC58        <---------ALFIN1 ------->MYB46(3)     --------->AHL20(2)     <---------ANAC58       --------->MYB46(3)          ----- ----ATHB12----------->GT1 --------->YAB1    <---------ANAC46     --------->PCF2     <----------DOF2   aacaattggcaagtggtgagaaaatgaaataataccacatagaacttgtgtgggcattatgttatttgctcccaccattacctattactttctcatactt  22805000                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                         <------ZmHOX2a(2)                                                         --------->CCA1(2)                                                        --------->ARR14(2)                                                        <---------ARR11(3)           ----------->GT1                              --------->AGP1        <---------YAB1                          <---------AHL20(2)    ---------->DOF2     <---------AHL20(2)                         --------->AHL20(2)------>ZmHOX2a(2)     <---------YAB1                      <----------DOF2--------->ARR11(3)   <---------ICU4               ================================HOX2a_HOX2a ------>GT1<---------ANAC55(2)  <------ZmHOX2a(1)       <---------ARR14(2)      <----------DOF2   gttaaatattattatgtaaaaccagaataacttaggagcgagacttttatttaaataagatccactgatcttaaaagtgagacttttgtattttttaaaa  22805100                                                        <-----------GT1                                                     <---------ARR11(3)                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                                <---------YAB1                                             --------->AHL20(2)                                             <---------AHL20(2)                                            --------->AHL20(2)                      --------->ICU4        --------->AHL20(1)                    ----------->GT1        --------->YAB1                                    <-------               --------->AHL20(2)      --------->AHL20(2)                                    <-------           <---------AHL20(2)      --------->AHL20(2)--------->ARR11(3)                   <---------AHL20(1)         <---------RVE1(1)    <---------AHL20(2)--------->ICU4                            --------->AHL20(1)        --------->ARR11(3) <---------AHL20(2)<---------YAB1                            --------->AHL20(2)        <---------ARR11(3)--------->AHL20(2)<---------AHL20(1)              <---------MYB52(1)      -        <---------GLK1(2)<---------YAB1<---------AHL20(2)       <----------DOF2  --------->TOE2(3)<--   atatgctacagatttttttatatagttattatataaaaaatataaatataattaatatctacaatacttttgaaaactgttagcctcaaaaaaatattat  22805200  Previous    Next  AGI:  At1g61740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38814.1); contains InterPro domain Protein of unknown function DUF81; (InterPro:IPR002781) Range:  from: 22801734    to: 22804738    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version