Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------TOE1(3)                                                <---------LBD16                                              ------>ZmHOX2a(2)                                             <---------HSFC1(2)                                             --------->HSFB2a(1)                                             <------ZmHOX2a(2)                                             <---------HSFB2a(1)                                            <---------ARR14(2)                                            <---------ARR14(3)                                            --------->ARR14(2)                                            --------->ARR14(3)                                     <-                                            <---------ARR11(3)       --------->GLK1(1)            ---         ---------->DOF2                    <-----------ARR10        <---------GLK1(1)          <----       <---------AHL20(2)                   --------->ARR11(3)   ------>ZmHOX2a(2)            ------- --------YAB1        --------->GLK1(2)  <---------LBD16  <---------TOE2(3)                  <-------- -------->AGL15  <---------ALFIN1      <---------LBD16  ---------->DOF2             <---------ARR11(3) ---------AGL15 <---------ZAT14  --------->CCA1(2)     <---------AHL20(2)----------->HVH21 <---------   tatgagtatataaaagcctgcacattctgttcaagatagacctcgggatcttcggatttaaagttgatcggagttgcgacatggaagatgtattcacagc  22796100                                                 ------>ZmHOX2a(2)                                                 ====================================HOX2a_HOX2a                                                =====================================HOX2a_HOX2a                                                <------ZmHOX2a(2)                                               <---------ARR11(3)                                               <-----------ARR10--------->ARR11(3)                                               <---------ARR14(3)         <---------ARR14(2)                    --------->ARR14(3)         --------->ARR14(2)                    --------->ARR11(3)        <------ZmHOX2a(1)                      --------->ARR14(2)     --------->YAB1                     <---------ANAC58        <---------ARR11(3) -----NtERF2                            <---------ANAC58      --------->ANAC58 ------>LBD16                           <---------ANAC46      --------->ANAC58        <---------At4g35610 -----LBD16                       <-----------ARR10        <------NtERF2--------->HSFC1(2) -->DEAR3(1)                      <---------ARR14(2)     <---------ETT(2)       --------->DAG2 -At5g28300                       --------->ARR14(2)     --------->RAP2.6(2)  ------>ZmHOX2a(1) --GT1<---------TOE2(3)     --------->WOX13(1) <---------ARR14(2)       <---------HSFC1(2)  <--------   cggagaatgaggattcgaaactgtcttcatcagtcaaatctgccttgaagatcttcaggtcgccaagctcttgaagtttcctaaggtgagctattttctt  22796200                                                                                                    -                                                                                            ------>ZmHOX2a(2)                                                                                           --------->GLK1(1)                                                                                           <---------GLK1(1)                                                                                          <---------ARR11(3)                                                                                          --------->ARR11(3)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                          <---------AGP1                                                                                         <---------CCA1(2)                                                                                     ----------->RAV1(2)                                                                                    --------->GLK1(2)                                                                                    ------->TEIL    <                    --------->AHL20(2)                                             --------->ARR11(3)       --------->ZAT14                   --------->YAB1                            --------->ARR14(2)       <---------At4g35610       --------->AHL20(2)             ---------->DOF2    <---------ARR14(2) ---GT1<---------ZAT14  --------->AHL20(2)                  ---------->DOF2    <---------ZAT14    ---   ctcgttttctgcagtttcagaataaaaaaaatccattaaacattcaaaatgccttcagagaaaaaagaaagaagaagagagtgaagaacctggatctcta  22796300                                                                                                   --                                                                                                   <-                                                                         ----------->HVH21     ------                                                                         <---------ATHB12    <-------                                                                      --------->AtMYB61      ------>ZmHOX2a(2)                                                                     --------->MYB46(3)     <------ZmHOX2a(2)           <----------DOF2                                          ------>NtERF2          <---------ARR14(2)    <---------ZAT6                                               --------->SPL7            --------->ARR14(2) -------->ZAT14                    <---------ANAC58            --------->LBD16  --------->ANAC46 ---- ---------ZAT14                    <---------ANAC58           <---------ANAC58  --------->ANAC58 <--- ------>ZAT6          <----------DOF2                         <---------ANAC58  --------->ANAC58<----   actgtagtgttaactttgtagccactttgaagcaaatgcttgatgagaatagaggctaagtttcccgtgccaccaatgacacaagccttcttcgatccgg  22796400 ------->ALFIN1      --------------->AtSPL8 --------ANAC46    <---------ICU4 --->LBD16         --------->ATHB12 --LBD16--------->GLK1(2)  <----------DOF2 ----->ALFIN1     <---------YAB1                                                                    - ------ANAC46     --------->ICU4                                 *TSS                        -------- -----MYB52(1) ------------>ATHB5                            <---------YAB1           ----------->TBP   tgtgtgtaagagtctggtccatgattgtacttttgaaattacagagatagagatttagttgttatgagtttatcgtcttgagacttctatataagaagta  22796500                                                                          <---------YAB1                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                      <-------MYC3                                                                      ------->MYC4                                                                      ------->MYC3                                                                      <-------MYC2                                                                      ------->PIF4                                                                      <-------PIF4                                                                      <-------MYC4                                                                      ------->PIF5                                                                      ------->MYC2                                                                      <-------PIF5                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     <---------TGA1a                                                                     --------->TGA1a                 ------>ZmHOX2a(1)                                   =============================MYC_MYB                <---------ANAC58                                     ==========================MYC_MYB   --------->CCA1(2)           --------->REM1(1)                     ==================bZIP_DOF  --------->ARR14(2)          <-------TEIL              --------->HSFB2a(2) <----------DOF2  <---------ARR11(3)       <------MYB46(1)     <---------TOE2(3)     --------->ANAC55(2) ------>MYB46(1)  --------->ARR11(3)       <------MYB83  ------------>CBF            <---------ANAC55(2) -------->P  <---------GLK1(2)       --------->MYB111(1) ---------->DOF2      <------------OsbHLH66 ------>MYB83  --------->ARR11(1)      --------->MYB59<------ZmHOX2a(2)       --------->ANAC58     --------->MYB46(3)  <---------ARR14(2)      --------->MYB46(2)  =================================bZIP_DOF------->GAMYB ---------->ARR10===============================HOX2a_HOX2a      --------->ANAC58   <-----------GT1 --->GT1        <---------ANAC58----------->RAV1(1)     <---------HSFB2a(2)------>ZmHOX2a(2)   aaaagatttgcaaatagtccttgctcattaggtacaacagtagatcaataaggctgttttagaaggtaagcacgtgatctttgaaataaccaacttgtct  22796600                                                         --------->YAB1                                                         <---------ICU4                                                      ------>MYB46(1)                                                      ------>MYB83                                  <---------YAB1    <---------MYB59                    <---------WRKY18(1)     <---------YAB1 <---------YAB1    <-----------GT1                  <---------WOX13(1) --------------------->WRI1          <---------YAB1             ---------->DOF2  <---------GLK1(1)   -------->P--------->YAB1<---------ICU4         --------->YAB1       --------->GLK1(1)--------->At4g35610    <---------YAB1          -------   tcacctaagaatcaaaaaagattgaccttcagagttctgatttgttatcatctaccaaattatcacaagagtttgattatttctgtctctaaacaatata  22796700                                                                ------>ZmHOX2a(2)                                                               <------ZmHOX2a(2)                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                  --------->GLK1(2)           <---------ARR11(3)                               <---------TOE2(3)       <----------DOF2         <---------ZAT6   --------->ZAT6            <-----------GT1                          <-------    <----------DOF2  <---------ZAT6    <---------MYB52(1)     --------->ARR11(3)         <----------DOF2 -->AHL20(2)--------->MYB52(1) --------->MYB59   --------->AHL20(2)             ---------->DOF2   acacagctttagagtaacgaatagtgttacagtaaggttctgttacttcaattttttctttgccgatcttaaaatgagttgcaaaagaatgctttttact  22796800             <---------GLK1(2)    ------>MYB46(1)    --------->GLK1(2)          --------->ANAC46                       --------->ANAC46    ------>MYB83    --------->ZAT14                          --------->ANAC46                      <-   --------->WOX13(1)          --------->ZAT6                --------->ANAC58                      <-  --------->AtMYB61 <---------ZAT14                          --------->ANAC58           <---------ANAC58 ----GT1<-----------HVH21    <-----------GT1               <-----------GT1              <---------ANAC58   tccaccaatctgtcaaattctctgcagtttttaacacaacttggacttgctatgttctgtttcacgaattacacgagtcaattcaacataacttgctctg  22796900                             --------->ANAC58                             --------->ANAC58                  <-----------ARR10                  --------->ARR14(2)    --------->YAB1                                            <--                  <---------ARR14(2)   <---------YAB1                                 <-----------GT1              --------->ANAC46       <-----------GT1                       ---------->DOF2    ------- --------ANAC58   --------->GLK1(2) <---------AHL20(2)        --------->MYB52(1) --------->AHL20(2) --------ANAC58  <---------GLK1(2) --------->AHL20(2)      --------->TOE2(3)  --------->YAB1---------   ttcttgtccatgtttcacagaatctggccttaagcaattttatcatatttaagctacaaatccataacagagtttaacaaagataaaataaccagaaagt  22797000  Previous    Next  AGI:  At1g61720.1    Description:  BAN (BANYULS). Identical to Leucoanthocyanidin reductase (BAN) [Arabidopsis Thaliana] (GB:Q9SEV0;GB:Q680A7;GB:Q9SYA8); similar to DFR (DIHYDROFLAVONOL 4-REDUCTASE), dihydrokaempferol 4-reductase [Arabidopsis thaliana] (TAIR:AT5G42800.1); similar to anthocyanidin reductase [Vitis vinifera] (GB:BAD89742.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 22794833    to: 22796465    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g61730.1    Description:  DNA-binding storekeeper protein-related. similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT4G00390.1); similar to unknown [Populus trichocarpa] (GB:ABK93310.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 22796884    to: 22798368    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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