Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------TOE2(3)                                                          <---------AHL20(2)                                 <---------YAB1        --------->AHL20(2)                    --------                          <----------DOF2              <---------AHL20(2)               ----------->GT1                         --------->YAB1               <---------AHL20(2)             ----------->GT1                         <---------ICU4               --------->AHL20(2)            --------->DAG2---                        <---------ATHB12    <---------AHL20(2)                      --------->MYB59        <---------ANAC55(2)    --------->YAB1         <---------AHL20(1)            <---------------AtSPL8        ----------->GT1 --------->ICU4      --------->AHL20(2)                      <---------TOE2(3) ------AHL20(2)    <-----------GT1--------->ATHB12 --------->WOX13(1)           --------->YAB1   ----   ttttttagataagtaaaatttttgcaatctttatcttgattagtatttaaaatcaattaatttatgttttaagtgtaaactaaaataaggtagaaaaaag  22770900                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                    <------MYB46(1)                                   --------->YAB1                                    <------MYB83                                     <---------YAB1                                  <---------WOX13(1)                                --------->AHL20(1)                                --------->ATHB12                                    --------->AHL20(2)                               --------->ICU4   ------>ZmHOX2a(2)                   <---------AHL20(1)                               <---------YAB1  <------ZmHOX2a(2)          --------->ARR11(3)  <------          --------->YAB1     --------->YAB1   --------->ARR14(2)         --------->YAB1<---------TOE2(3) -->DOF2 <---------ATHB51    --------------->AGL15        <---------TOE2(3)         <---------AHL20(2) -------->GT1          --------->ANAC55(1)    <---------ARR14(2)  <---------TOE2(3)--------->YAB1 ------->GT1           --------->ANAC46  <----------DOF2<---------AHL20(2)<---------ARR11(3)  <------   agataaaaacaataatgtgtgatacacttaaccatgattggtactttggatccactaatttatgttttaagaaaatgatattccattataatgtttcccg  22771000        <---------MYB52(1)      ----------->GT1   --------->MYB52(1) <---------MYB52(2) ---->LBD16 --->LBD16            <-----------GT1 --->HSFB2a(2)  --------->LBD16                                                                     - --->ANAC46    <---------ANAC46                 <----------DOF2                                     - ----HSFB2a(2) <---------ANAC58                <---------ANAC58                                  ---- -->HSFB2a(2)  <---------ANAC58           <---------ICU4     ---------->DOF2                 -------- ---HSFB2a(2) <---------LBD16  --------->WOX13(1)      ---------->DOF2                   <---------ZAT14 ---LBD16--------->ATHB12   --------->TOE2(3)  <---------ANAC58                          --------->ZAT14   gaaacaaaccgtgatttgcggatgttacaacgtcaattagttcaacatggctttacttaaggcaaaagactacaaattcaaatagtgagactatacagat  22771100         <---------AHL20(2)       <---------YAB1    <---------AHL20(2)                       ----------->GT1    --------->AHL20(2)    <---------YAB1                          <---------------AtSPL8   <---------AHL20(1)                --------->TOE2(3)      <---------AHL20(2) --------->AHL20(1)                 <---------ICU4          --------->AHL20(2)       --------->YAB1 -------->AHL20(2)                  --------->YAB1      --------->AHL20(2)        --------->YAB1 -------->YAB1                      --------->ATHB12    <---------AHL20(2)        <---------ICU4 ---- ----->YAB1      <---------ANAC46  --------->ICU4      <---------AHL20(2)        --------->ICU4<----- --->GT1--------->AHL20(2)         <---------ATHB12  --------->YAB1    ------->TEIL  <-----------GT1   aataatattattaaaaattaagtggattgtttttcaaatcattaacatggtacaaaaattatttaaatatatgtatatttgaaataatcacaatttttca  22771200                                                                                       <-----------GT1                                                                                   --------->TOE2(3)                                                                                 <---------ATHB12                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                              <---------MYB46(2)                                                                              --------->AtMYB61                     <---------At4g35610                                      --------->MYB46(3)                     --------->At4g35610                                      <---------MYB111(2)                     --------->ZAT2                                           <---------MYB111(1)         <---------ICU4                                                      --------->ANAC58         --------->ATHB12                                                    --------->ANAC58  --------->ANAC46   <---------ZAT2---------->DOF2   <---------ALFIN1     <---------ZAT14 ----->ANAC46     --------->MYB46(3)              <-----------GT1         --------->ZAT14 ------GT1       -------->P  ----------->GT1   <---------CCA1(2)          <---------ZAT18   caaaacacaactcattgctaaccagctcatatgctaaaaaagacaactcatttctccactcttttgacaaaaacagagcaccaaacattaaacccttcaa  22771300                            *TSS                            ----------->GT1                   <---------ANAC55(2)                   --------->ANAC46                   --------->ANAC58                   ----------->GT1                   --------->ANAC55(1)                   --------->ANAC55(2)                   --------->ANAC58                       <<<<<<<<<TBF1  --------->YAB1             <-----------HVH21                         <<<<<<<<<TBF1     <---------ICU4     <--------            --------->AtMYB61 --------->AHL20(2)    <<<<<<<<<TBF1       <---------ATHB12    ---------     <-----------ARR10    ---------->DOF2        <<<<<<<<<TBF1    ---------->ID1       --------->ANAC46   aaacacaaatctcaccatcacacgtaaaaaaagaaaatatgtctatgcttcttcttcttcttcttcttgtcccattcattactccatcttcgcaatcttc  22771400                                                      --------->REM1(2)                                                     --------->ALFIN1                                              --------->ANAC46                                             --------->LBD16                    <---------LBD16         --------->HSFB2a(2)                --------->ZAT2              <---------HSFB2a(2)                <---------ZAT2           <-----------GT1                                           --           <---------HSFB2a(2)        --------->MYB52(2)  <---------ZAT6               <---------ZAT2    --------->ARR14(2)              <---------ANAC46<-------MYC3                       --------->At4g35610 -HSFB2a(1)--------->HSFB2a(2)    <---------MYB46(3)------->MYC3                   <------ZmHOX2a(1) >HSFB2a(1)------>ZmHOX2a(1) <-----------RAV1(2)   <---------ANAC46             <-----------RAV1(2)<-   cattcgaaacctcctcgaagctcgcggtttaccaggtggtttgtttccagacaacgtggagagttatagtctagatgataagacaggagagctcgaagtt  22771500                                                                                   <---------MYB46(3)                                                                                  <----------DOF2                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                         ---------->DOF2      <---------ZAT18       <---------ARR11(3)                              <---------YAB1     <-----------RAV1(1)  <----- ------->At4g35610                              ------>ZmHOX2a(2)         <---------AtMYB61    <----- --------At4g35610    <---------DEAR3(2)    <---------YAB1               <XXXXXXXXXXXXXXXXXXXXMIR169G*   cagctacaaaatccttgtttcgctcggttcgaaaacagagtatattttgatcgtgtgattaaagcaaatttaagctatggtgggcttgttggacttgaag  22771600                             <---------ANAC55(2)                             --------->ANAC55(2)                             <---------ANAC58                             <---------ANAC55(1)                             <---------ANAC46             ------>ZmHOX2a(1)                        <---------MYB46(3)              ------>ZmHOX2a(2)               <----------DOF2              --------->ZAT14     <---------HSFB2a(2)          <-------               <---------DAG2<---------ANAC58  --------->At5g28300  --------------------->WRI1   --------->ZAT6    <----------DOF2        <---------ZAT14     --------->HSFB2a(2)     --------->ALFIN1 ----TOE2(3)--------->ARR11(3)     ---------->DOF2    <---------ARR11(3)          <---------GLK1(1) ----TOE1(3)<---------ARR11(3)--------------->AGL15   --------->ARR11(3)---------->ID1  <-----------RAV1(1)   gtttaacacaagaagagctttttctttggttacctgttaaaggcattgcagtgaatgatccttcttctggacttgttctcttcgatatcggtgttgctca  22771700                                     <---------MYB46(3)                                 ------>ZmHOX2a(1)                              ------>ZmHOX2a(1)                            ===========================HOX2a_HOX2a                            ========================HOX2a_HOX2a                            ------>ZmHOX2a(2)                           =============HOX2a_HOX2a                           =========================HOX2a_HOX2a                           <------ZmHOX2a(2)                           ============================HOX2a_HOX2a                          --------->ARR14(3)                          <---------GLK1(2)                          --------->ARR11(3)                          <---------ARR11(3)                          <---------ARR14(2)                          --------->ARR14(2)    ------>ZmHOX2a(1)    ------>ZmHOX2a(1)                          <---------ARR14(3)  ----------->RAV1(2)   --------->TOE2(3)                        ----------->ARR10    ------>ZmHOX2a(1) <---------MYB46(3) --ANAC46          <----------DOF2 <---------MYB52(1)    ---------->DOF2           <---------ZAT6   taaacaaatctctcgttctctctttgaagatcctcctgtttgttatcctcctggtgagtcaaagtttgttcctcaaaacgttttagtgtttaatgccaag  22771800  Previous    Next  AGI:  At1g61667.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64729.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) Range:  from: 22771328    to: 22772166    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version