Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     >>                                                                                                   --                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                                         <-----------HVH21 --------->At5g28300                    <------MYB46(1)                              <---------At4g35610     ------------ -----------AGL15   <------MYB83                                 --------->At4g35610     --------->ANAC58 ---------->AGL15  --------->MYB59            <------ZmHOX2a(1)  ----------->RAV1(2) <-----------TGA1 ------DOF2        <---------AtMYB61        <---------TOE2(3) <---------ATHB12       <-----------HVH21   ttaagaagtttacaaaatggtttggttccaatctgaagaacaatttgaggaaaaccctagacccatcatctgcaacgtcgagtccatcgtcacggtactt  22759600               --------->LBD16               ------>NtERF2--------->ANAC58              --------->ANAC46                                   <---------TOE2(2)           --------->GLK1(2)--------->LBD16                     ------>ZmHOX2a(1)           --------->ARR14(2)                           --------->ANAC58                         <---          <---------GLK1(2) --------->ANAC58            --------->ANAC58                 <---------At4g35610       --------->YAB1       --------->ANAC46            --------->ANAC46     <---------GLK1(2)   ----     <-----------HVH21     --------->HSFB2a(2)     <---------SPL7<---------TOE1(2)    <---------ANAC58 <---------ALFIN1        ------>NtERF2             <---------SPL1(2)--------->CCA1(2) <---------ANAC58 >>>>>>>>>>>>>>>LFY     --------->DEAR3(1)       --------------->AtSPL3    <---------YAB1--------->At4g35610 ---->ZmHOX2a(1)      <---------At4g35610        --------------->AtSPL8    ----------->ARR10     ---- --->AtSPL8<---------ARR14(2)                  ------------------>SPL14  <---------At4g35610    <----   cctccactgtcagaatccgcctctcgctgcccgaaaacgatgttgttgttgtccgtacaagtcatcctagatttgagatgattctcttgcgagctaaaat  22759700                                                                                           ------>NtERF2                                                                                           <---------ATERF1(1)                                                                                           --------->LBD16                                                                                          --------->ANAC46                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                          --------->DEAR3(1)                                                                                       --------->DEAR3(1)                                                                                       <---------ALFIN1                                                                                      --------->ZAT2                                                                                      <---------ZAT2                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                    --------->DEAR3(1)                                                                                    <---------ALFIN1                                                                                  <-----------HVH21                                                                                  ------>NtERF2                                                                                  <---------ATERF1(1)                                                                                 --------->ANAC58                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                                <-------MYC3                                                                                ------->MYC3                                                                                <-------PIF5                                                                                ------->MYC2                                                                                <-------MYC2  ------>NtERF2                                                                                ------->PIF5  -------                                                                               --------->ANAC58                                                          ------->GAMYB        --------->ANAC46                                                <------ZmHOX2a(1)              --------->ANAC58                                            --------->LBD16        <---------ANAC58--------->ATERF1(1)      <---------ZAT6      ----------->GT1   XXXXXXXXXXXXXXXXXXXX>MIR391      <---------ALFIN1<------- ------ICU4        --------->LBD16        ------>ZmHOX2a(2)        <---------ANAC46<------NtERF2----- ----->ATHB12 --------->At4g35610         =============HOX2a_HOX2a <---------ANAC58--------->DEAR4(2) ---->ATHB1  --------->DEAR3(1)  --------->ANAC58      ---------->DOF2--------->GLK1(1)--------->AtMYB61 -----YAB1   --------->RAP2.6(2) --------->ANAC58      --------->MYB52(1)   --------->ANAC46 --------   cattggaagtgatagccgctccgaagcatggtgacaagaaatgatccgaaggagacataacgctccttggcgagttccaccacgcgccacctccgccacc  22759800                            ------>NtERF2                            --------->LBD16                           --------->ANAC58          --------->LBD16  --------->DEAR3(1)                                                  <-----         <---------ANAC58  --------->ANAC58                                              <---------TOE2(3)         <---------ANAC46  --------->ANAC46                                              <---------TOE2(2)       ------>NtERF2      <---------LBD16                                    <-------GAMYB----------- ---->RAV1(1)            <---------ATERF1(1)                                ------>ZmHOX2a(2)  <----- --ALFIN1<---------ANAC58------>ZmHOX2a(1)     ---------->DOF2            <---------ARR11(3)  <------ ---->AtMYB61      <-----------GT1          --------->YAB1                --------->ARR11(3)  ------- ->DEAR3(1)    <----------DOF2            --------->GLK1(2)     <----------DOF2       --------->ANAC46   acaaatcgatgccgtagctttaaactcctccgccatattaagagaatcagaaagttttagtataagctttctactagatcgttgctatacgaaggttaaa  22759900                                                                                            ---------  --------->AHL20(2)                                                                        --------- ----TOE2(3)                                                                      --------->AHL20(2) >GT1 <---------AHL20(2)    --------->CCA1(2)                                     <-----------TBP ----TOE1(3)     <-------GAMYB                                               ------->TEIL  <--------- ---DOF5.7(2)   <---------MYB46(3)                   <---------YAB1     --------->ALFIN1   <--------- --->DOF2       --------->MYB52(2)         ----------->GT1  *TSS        <---------ANAC46--------->ANAC46   gtttttatatatatgagtttgttgtatgtgatatgaagagcataagtgtaaaattttgatatatgtttatgagggtgtgtatgtttatataggcaagtac  22760000                                                                                              <------                                                                                              -------                                                                                            ---------                   --------->LBD16                                                          ---------      <---------ANAC46                                                                    <---------AHL20(2)      --------->ALFIN1                                                                 <---------AHL20(2)    --------->ALFIN1         ----------->HVH21            --------->YAB1              --------->AHL20(2) >ANAC58         <---------LBD16                          <---------ICU4          <---------AHL20(2) >ANAC58 ----------->GT1   <---------At4g35610           <---------YAB1           --------->AHL20(2) ------AtSPL8   --------->MYB52(1)                  <---------CCA1(2)         <---------AHL20(2) ------AtSPL3  <-----------GT1         <----------ID1  --------->YAB1------>ZmHOX2a(1)<---------AHL20(2)   ggacaagtgtgtggaaattaccggaatttagttgacatttgaagacaaaaacttatatcatcataacattcctatgtgatttttttaattaaataatctt  22760100                            <---------AHL20(2)                            <---------AHL20(1)                            --------->AHL20(2)                         <---------AHL20(1)          --------->YAB1                  --------->At4g35610                -------->HAHB4                              ----                  <---------At4g35610               <---------YAB1                          ---------   <---------AHL20(2)    --------->AHL20(2)         --------->ICU4                         <---------YAB1  --------->AHL20(2)    <---------AHL20(2)     ----------->GT1                           --------->YAB1 ---ICU4      ------>ZmHOX2a(1)            --------->ARR11(3)                           <---------YAB1 -->YAB1     --------->TOE1(3)         ---------->DOF2    <---------ZAT6              <--------HAHB4 >ARR11(3)   --------->TOE2(3)   ----------->HVH21--------->YAB1------>ZmHOX2a(1)     --------->YAB1 >GLK1(2) <-----------GT1--------->AHL20(1)<---------ARR11(3)  <---------MYB59       <---------YAB1   gattttaaattttttccttaagctaaatattttatttgacagaaagatgttgtaataatagtgttcctaatccctcaattttcttctattattataagaa  22760200                                                       <---------ARR11(3)                                                       --------->ARR11(3)                                                      -------->HAHB4                                                      --------->YAB1                                                     <---------YAB1            <---------AHL20(2)                                                     --------->ICU4        --------->AHL20(2)                                                   --------->YAB1      <---------AHL20(2)                                      <---------HSFB2a(2)  ------>ZmHOX2a(1)   --------->AHL20(2)                                   <---------DAG2  <---------ICU4      --------->AHL20(2) <---------TOE2(3)     <----------DOF2        <---------At4g35610<---------ZAT6      <---------YAB1  --------->AHL20(2) ------->GAMYB           <---------At4g35610 ----------->GT1   --------->AHL20(2)  <---------AHL20(2) ----->MYB46(3)       <----------DOF2 --------->HSFB2a(2)------>ZmHOX2a(2) <---------AHL20(2)       < >YAB1            ---------->ID1   <----------DOF2--------->ICU4<---------AHL20(2)--------->AHL20(2)<   caactgtctttgtgagatttgtttctttgctgcttagcttttcgaagaagtgataatgatcctcattttataaatatttaaatatttaatttgagattag  22760300                                                                                  <---------ANAC58       <------MYB46(1)                                                           <------MYB83       <------MYB83                 --------->ARR14(2)                           <------MYB46(1)      --------->MYB111(1)           <---------ARR14(2)                         <---------WOX13(1)      --------->MYB46(2)   <---------------AGL15                             --------->ATHB12      <---------MYB46(3)  ----------------->AG                           --------->TOE2(3)      --------------->AtSPL8  --------->DAG2--------->AHL20(2)      --------->DOF5.7(2)      <---------------AtSPL8 ---------->DOF2<---------AHL20(2)      --------->At5g28300      --------->MYB59     ----------------->AGL1                   ------->GAMYB <---------MYB46(3) ------MYB46(1)           ----------------->AGL2                --------->MYB52(1)<---------ANAC58 ------MYB83     <---------YAB1--------->DAG2              <---------CCA1(2)<---------YAB1   ataggtgtttggtactattatgcaagatgccaaaaggggatactatttatatatagacattatatctaacggtaacctttgattggttgccatcaaattc  22760400                                                        <---------AHL20(2)                                                       --------->AHL20(2)                         <--                                                   <---------YAB1                        --------->ANAC58                       <-----------HVH21     <---------YAB1                              --------->ANAC58        ------>ZmHOX2a(2)                  <-----------GT1                               --------->ANAC46   tacaaatcgatcgtttatattaagtggtcagaaatagaaaacatatcacgattttgattaaatcagtttttagtaattgtatagacaaaacacgaaaatg  22760500  Previous    Next  AGI:  At1g61660.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to ethylene-responsive protein -related [Arabidopsis thaliana] (TAIR:AT3G20640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39091.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 22757380    to: 22759960    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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