Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->GLK1(2)                                           --------->GLK1(1)                                           <---------GLK1(1)                                         <------ZmHOX2a(1)                            <---------ARR11(3)  --------->LBD16              --------->YAB1--------->ARR14(2) --------->HSFB2a(2)              <---------ICU4<---------ARR14(2) <---------HSFB2a(2)             <---------ATHB51--------->CCA1(2) <---------HSFC1(1)--------->HSFB2a(1)               <- <----------DOF2 --------->YAB1        <---------TOE1(3)    --------->ANAC58  ---------->DOF2      <- ----ZmHOX2a(1) <---------YAB1         <---------TOE2(3)    --------->ANAC58<------ZmHOX2a(2)      <- ----ICU4    --------->ICU4 --------->ARR11(3)<---------LBD16    <---------HSFB2a(1)        <--------   ggactttgcagagaaattatgacaatagaagatatactcttaaggaattctggaaaaatgaaacgaaatgttccctcgatcaaaggccgatggtatcatt  22726400                                                                                            ------>NtERF2         <---------CCA1(2)                                                                 --------->LBD16         ------>MYB46(1)                                                  <---------At4g35610 --------TOE2(3)  <---------ARR11(3)                                      --------->At4g35610       - --------TOE1(3)--------->ANAC58                            --------->ARR14(2)             ------>NtERF2 --------YAB1   --------->ANAC58    --------->ZAT6          <---------GLK1(2)            <---------LBD16 -YAB1   ------>MYB83   --------->YAB1           --------->At4g35610 ---------->DOF2   --------->GLK1(2)   taagataaaccaaatctcaagctctataagagtgtttctcactaaaaaatcagataaatctggattctagcaaaagagctgattcagagactccggcctt  22726500                --------->LBD16           <---------GLK1(1)          --------->ARR14(2)          <---------ARR14(2)                                          --------->YAB1          --------->ARR11(3)                                       <---------ICU4          <---------ARR11(3)                                      <---------YAB1     ---------->DOF2                         --------->AGP1       --------->ICU4 <---------AHL20(2)                --------->YAB1               --------->YAB1 -------->AHL20(2) --------->HSFB2a(1)       --------->ARR14(2)<---------YAB1        <-----------GT1   gattttataaagtatctccgagggttctcattttgaatcataaaccagaactaccttgagagtatatcataatcaaaacacacatttttacaacatacta  22726600                                                                                             <-------                                                                                           -------->HAHB4                                       --------->ANAC58                                    --------->YAB1                                       --------->ANAC58                                    <---------ICU4                                     ------->GAMYB                                        <---------ATHB12                   ----------->GT1  --------->MYB46(3)                <---------ZAT18     --------->ICU4                  --------->GLK1(2)-------->P                ------->GAMYB              ------>MYB83          --------->At4g35610     --------->WOX13(1)    --------->AHL20(2)  --------->AHL20(2)          --------->ZAT2      --------->YAB1     <---------ANAC55(2)  --------->ZAT18   ------>MYB46(1)       <---------At4g35610   <---------YAB1      <---------YAB1  ---------->DOF2      <---------MYB59   caaaacttaagcagctagagaatgtgaaactatgatcaaccaaggcaaattacgaaaatttaacagacaaagcgcacataaattgaaacctaatgatgaa  22726700                                       --------->ANAC58                                    =================HOX2a_HOX2a                             <---------YAB1                             --------->ICU4                             ========================HOX2a_HOX2a                         --------->CCA1(2)                             ------>ZmHOX2a(1)                              <----------DOF2         <                         --------->ZAT14      <------ZmHOX2a(2)            --------->TOE2(3)        -                   ------->TEIL     ------>ZmHOX2a(1)                --------------->AtSPL8<---------YAB1                   >>>>>>>>>>>>>>>>>LFY--------->ANAC58           <---------DAG2   <---------DREB2C(2)      <---------TOE2(3)  <---------ZAT14     <---------ARR11(3)   <----------DOF2  <---------DEAR3(1) --YAB1       --------->CCA1(2)   ----------->RAV1(2) --------->GLK1(2)  ------->TEIL<------NtERF2<--   aatcaaatgaggtaagagatgaaccagtgtcctgattcctgaagcaagatcgaaagaatcaagagaaactttatgtacctttaagtcggcgatatgagta  22726800                                                                                   --------->ANAC55(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                <---------ARR14(2)                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                            <---------ANAC55(2)              ----------->GT1                                               <---------ANAC46        --------->ATHB12                                                   <---------LBD16      <---------TOE2(3)                                                   <-----------GT1   <---------YAB1*TSS                          <----------DOF2     --------->At4g35610   <---------AHL20(2)                       <-----------GT1        <---------At4g35610 <---------RVE1(1)                      <-----------TBP     --------->STY1(1)   --------->ARR14(2) ---------ARR11(3)                  ----------->GT1         <---------STY1(1)  <-----------HVH21 -------->ARR11(3)                 --------->MYB59         --------->TOE2(2)<---------ANAC55(1) <---- -------ZAT6<---------ANAC46       <---------TOE2(3)       --------->TOE1(2)--------->ANAC55(2) <----   gagatattaatgtttggggtaaaatgaaaactgaaataaggtatttatactttctctgaaacctagggcttctgaattacgggttacgccttctatgggc  22726900                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                      --------->GLK1(1)                         <----     <---------TOE2(3)                     <---------AHL20(2)                                --------     <---------YAB1                        --------->AHL20(2)                                --------     <---------TOE1(3)                     --------->AHL20(1) <---------AHL20(1)             <------- <---------ANAC46         ------>NtERF2    <---------AHL20(1) --------->ARR11(3)             <------- <---------ANAC58        <---------ATERF1(1)         --------->ARR14(2)                   --------->GLK1(2) <---------ANAC58      <---------LBD16 <---------YAB1<---------ARR14(2)               --------->AHL20(2) -----ANAC58  --------->WRKY18(1)      --------->AHL20(2)     --------->AHL20(1) --------->AHL20(2) -----ANAC58 <-----------HVH21         <---------AHL20(2)     <---------ARR11(3) <---------AHL20(2)   ttggcttatggttagggtcaagtagcccggcccatttagttttaattaattagcatatatccaaaatattgcattaaaactatttaaaaaaaattctaga  22727000                                                                             <------ZmHOX2a(2)          ---------->DOF2                                                   <---------ARR11(3) ------ARR14(2)                                                             --------->AGP1 ----->ARR14(2)                           --------->ANAC58                  <---------ARR14(2) ----->GLK1(2)                            --------->ANAC58            <-----------GT1 --------ARR10                            <---------ANAC55(2)     <---------ARR11(3) -----GLK1(2)                 --------->TOE2(3)                   --------->ARR11(3)             ---- ->HSFC1(1)                 --------->ARR11(3)           <---------At4g35610--------->ARR14(2)------- ->HSFB2a(2)                <---------ARR11(3)  --------->YAB1   --------->YAB1      <---------ANAC55(2) --HSFB2a(2)            ---------->DOF2   --------->ANAC46      <---------YAB1       --------->ANAC55(2) --HSFC1(1)           <---------AHL20(2)  --------->ANAC55(2) --------->CCA1(2)   <---------ATHB12   atctgatcaaatgaaagagtgtatttaaaagacctcaatctattacgcaaacatatgttagatgatatgatattactagatccaattaagtgatactata  22727100                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                               --------->ANAC46                                                                          <---------AHL20(2)                                      --------->ANAC58                 <---------AHL20(1)        <---------ARR11(3)            <----------ID1                   --------->AHL20(1)        --------->ARR11(3)            --------->ANAC58                 --------->AHL20(2)  <---------YAB1                      --------->ANAC46                <---------AHL20(2) ----->ANAC46             --------->YAB1                          --------->AHL20(2)  --------->TOE1(3) -->ZAT14 ------>ZmHOX2a(2)     --------->YAB1      ---------->DOF2<---------AHL20(2) --------->TOE2(3)   caccatgaatgatctacagatgtgatattcacaatgaaaaacgcaaaactatatcaaagccaattggattaaatattttatacgaaaaccctaatctaca  22727200                                                                                                    -                                                                                               ------                                                                                               ------                                                                                               ------              <---------YAB1                                                                 <-------            <---------CCA1(2)                                                                --------          --------->YAB1                                                                     --------         <-------TEIL                                                           <---------REM1(2) ---     --------->ARR11(3)                                                       --------->ARR14(2)  <--     <---------AHL20(1)                                                       <---------ARR14(2) ----  --------->AHL20(2)                                                   ----------->HVH21<-------TEIL-  <---------AHL20(2)           <---------ZAT6          <-----------HVH21      --------->ZAT14--------   atatttatatattcatatcattgttttttcttagtgagagtcatatgtctctcactatgtcactcttagacgtatgaccgtatacacacatacacacaca  22727300  Previous    Next  AGI:  At1g61580.1    Description:  ARP2/RPL3B (ARABIDOPSIS RIBOSOMAL PROTEIN 2); structural constituent of ribosome. Identical to 60S ribosomal protein L3-2 (ARP2) [Arabidopsis Thaliana] (GB:P22738;GB:Q9SY92); similar to ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G43170.2); similar to ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G43170.3); similar to ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G43170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83050.1); similar to hypothetica Range:  from: 22724357    to: 22726817    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g61590.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G05940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69043.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 22727166    to: 22729739    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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