Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ------->GAMYB              --------->AtMYB61              --------->TOE2(3)        --------->ANAC46                     <-------TEIL       --------->At4g35610                  <------ZmHOX2a(2)                                      --       --------->ZAT14        --------->ANAC58                                               --------       <---------ZAT14        --------->ANAC58   <---------ETT(2)                           ---------       --------->ZAT18       --------->DAG2--------->AGP1   <-------TEIL                 <------MYB83 --------->DOF2             ---------->DOF2--------->ARR11(3)       --------->MYB52(1)   <------MYB46(1) --->ZmHOX2a(1)     ----------->RAV1(1)    <---------ARR11(3)       <---------ARR14(2)  <---------AtMYB61 ---->ID1    --------->MYB46(3)      <----------DOF2       <--------P                   --------->MYB59   ctcaaagtctgcacaaccacaacaacaaaaaaaagcaaactttgagatccatcgacacaaggttgatgcataactgaaattagatttgatttggtcggaa  22722800                                                                                 --------->AtLEC2                                                          <----------DOF2<---------TOE2(3)            <---------ZAT14                               --------->TOE2(3) --------->GLK1(2) ------->AHL20(2)                                --------->ATHB12       --------->YAB1 --->GT1    --------->ZAT14              <---------ARR11(3)          --------->TOE2(3) >ETT(1)  --------------->AtSPL8         --------->ARR11(3)       ----------->RAV1(1)   aaaaaatactactgtgtaccaaaacagagtcaaattggtagaagatttcaaagattgaaactttaatacaacattaagaatccatggagataactactga  22722900                                                                                          ---------->DOF2                                                                               <---------DEAR3(2)                                                                               <------MYB83                                                                               <------MYB46(1)                                                                              --------->MYB46(2)                                                                              --------->MYB55(2)                                                    <---------ZAT18           <---------DEAR3(1)                                                    --------->ZAT14           <---------MYB46(3)                                                    <---------ZAT14           <---------DREB2C(2)----                                                    --------->ZAT18           <---------DEAR4(1)-----                                                 <---------ANAC46            <---------ORA47(1) <----             --------->YAB1                      <---------ANAC58  --------->TOE1(3)<---------YAB1       --------->GLK1(2)                         <---------ANAC58  --------->TOE2(3)--------->ICU4   ttcacagacaatctatgagaaactacatgagattagtcggaaatttcaacttcgtgtactaaaaaaaaacctcaaattggtcggtgaagattgaaagaga  22723000                                                                        <--------HAHB4                                                                        --------->YAB1                                                              -------->ZAP1                       ---                                                              --------->DEAR3(2)                  ---                                                            XXXXXXXXXXXXXXXXXXX>MIR3434          ----                                                            <---------WRKY18(1)                 -----                                                           --------->WRKY38(1)                  -----                                                  <---------ZAT2        --------->ATHB12      <------           --------->CCA1(2)                      <---------At4g35610   <---------ICU4        -------          <---------ARR11(3)        <---------SPL7--------->ZAT2       <---------ATHB12     ------>MYB83          --------->ARR11(3)       <---------ANAC46        ----------->HVH21                ------>MYB46(1) ----->CCA1(2)                  <---------DEAR3(1)--------->At4g35610  --------->ICU4     <---------MYB59 ---->ARR11(3)             --------->ZAT6       --------->ZAT18  ------>MYB83          <---------ARR14(2) -----ARR11(3)           <-----------GT1    <---------WRKY18(1)  ------>MYB46(1)       --------->ARR14(2)   tattagaaaaaagatttagacctcgattaactcttcggcgtaagcttgagcgagctgagtcttgaccgactccatcattacttcgggcgaaaccgaacta  22723100                 <---------ANAC46                --------->RAP2.3(1)                <------NtERF2               ------>NtERF2               <---------ERF1               <---------ATERF1(1)               <---------DEAR4(2)              <---------ATERF1(2)              --------->DEAR3(1)              <---------RAP2.3(2)              <---------RAP2.3(3)             <---------LBD16           <---------DEAR3(1)      ------>MYB83           ------->TEIL  ------->TEIL<---------DEAR3(1) ------>TOE1(3)<---------ORA47(2) ------>TOE2(3)<---------RAP2.3(1) ------->RAV1(2)--------->ATERF1(1) ---->MYB52(1)--------->ATERF1(2)                                                  --------->TOE2(3) --->P------>MYB46(1)     <---------YAB1                                           --------->TOE1(3) ---MYB111(2)--------->ATERF1(1)                                                 *TSS -->MYB46(3) <---------ABI4(1)                        ---------->DOF2        --------->AHL20(2)  <---   cctgaacctcccatcggcggcgaagagtatgaatccatttcttctctctctctctcaaaagtcaagtttctgcgatgaattaaaaccctaaaacctcttc  22723200                    ------>ZmHOX2a(1)                   --------->TOE1(3)                   --------->TOE2(3)                                     <---------YAB1                  ------>ZmHOX2a(2)                                   <---------AHL20(2)            <---------ANAC58                        ---------->DOF2   <---------AHL20(1)            <---------ANAC58              <------------CBF            --------->AHL20(1)    =====================HOX2a_HOX2a     --------->CCA1(2)            --------->AHL20(2)    ------>ZmHOX2a(1)                   <---------ARR11(3)        <---------AHL20(2) ------ALFIN1   <---------ARR11(3)      --------->ARR11(3) <----------DOF2<---------AHL20(2)   cacctcctaaaatagcttgatccttaatggactaggttttgagatattgggccttgaagcccttttattcaatttattaatgggcctgttttgaatccaa  22723300                  ------->GAMYB                  --------->TOE2(3)                                     <---------ANAC58                 --------->MYB46(3)                                  --------->ZAT18               <-----------GT1                                       <---------ZAT18         --------->ARR14(2)                                         <---------ANAC58         <---------ARR14(2)                        --------->At5g28300  <---------ANAC58         <---------GLK1(2)                        ----------->GT1   <---------ANAC58              ---     --------->At4g35610                       <---------AtLEC2 <---------ZAT14                  ----     <---------At4g35610                     <---------YAB1     --------->ZAT14        --------->LBD16    ----------->RAV1(1)--------->MYB46(3) <----------DOF2  --------->At4g35610       <-----------RAV1(2)   atcgagcagcagatttgtaaccacaacaacttcagaggttttgacttttgaatggtaaattagcagaatagtgtgcgagtgaaatgttcaggggttcgaa  22723400                      --------->ANAC55(2)                     --------->MYB59                     <---------TOE2(3)                 <----------DOF2            <---------ANAC58       <---------CCA1(1)       <---------RVE1(1)                                  --------->ANAC46                         --      --------->AHL20(1)                                  --------->ANAC58                         <-      <---------AHL20(1)                  --------->YAB1  <---------ALFIN1                    <------      --------->ARR11(3)                 <---------YAB1   --------->ANAC58                <---------ZAT18      <---------ARR11(3)            --------->ZAT6      ----------->RAV1(1)             --------->ANAC46 -------->GT1 <---------MYB52(1)  <-----------GT1      <---------ZAT18                  --------->LBD16 ----->DAG2 <---------ANAC58   --------->YAB1        --------->ANAC46                 <---------LBD16   aggtgaaagatatttcgttcttttaggtattactaataacactctcatagtatataggccacacaatggaaaacatgagttgttctgttcagggaacttt  22723500                                              <------------CBF                                            --------->ICU4                                         ----------------->AGL3                <---------ALFIN1                            ----------->HVH21--------->ATHB12               --------->ANAC46                          --------->O2   <-----------------AGL1             --------->ANAC58                          --------->ANAC46--------------->AGL15    --------->LBD16     <----------DOF2               ------------>CBF          ----------------->AGL1  <---------LBD16------>NtERF2    ----            --------->At4g35610          <-----------------AGL3 --------->MYB52(1)     <---------DAG2           --------->ARR11(3)            ----------------->AG  <---------ARR14(2)  --------->ZAT14 ------->At4g35610   <-----------GT1     <-----------------AGL2--------->ARR14(2)<------NtERF2  ----- --------At4g35610 <---------ATHB12  <---------ANAC58        ----------->ARR10 --------->DEAR3(1)---- ----DOF2  <---------ARR11(3)        <---------ANAC58--------->DEAR3(2)     --------->ANAC58   ------   gtgctgcaagggagagcttcaattatccacatgactcgttcttgccaagattggaaccgaggcgagaaccggagaaactcgccaccgtactttttggaaa  22723600         =================HOX2a_HOX2a         ------>ZmHOX2a(2)        <------ZmHOX2a(2)        ==================HOX2a_HOX2a                    --------->ANAC46       --------->ARR14(2)                               --------->LBD16       --------->ARR11(3)                              --------->HSFB2a(2)       <---------ARR11(3)                              <---------HSFB2a(2)       <---------ARR14(2)                              <---------LBD16          <---------TOE2(3) ----->ANAC58                                 <----------DOF2   --------->MYB52(1)                  - ---->DAG2 <-----------HVH21    <---------AHL20(2)<----------DOF2             ---------->DOF2       - ----->ANAC58      <------ZmHOX2a(1)    --------->ARR14(2)<------ZmHOX2a(1)--------->YAB1           - ---->DOF2 ------>ZmHOX2a(1)   --------->AHL20(2) <---------------AGL15<-------TEIL            <-----   agcatttaagatccttcacgaggaaactattcatttaatctggttcttctttcttttccaggaaactaatggatgcatcataaaggttccatttagatgc  22723700  Previous    Next  AGI:  At1g61570.1    Description:  TIM13; P-P-bond-hydrolysis-driven protein transmembrane transporter. Identical to Mitochondrial import inner membrane translocase subunit Tim13 (TIM13) [Arabidopsis Thaliana] (GB:Q9XH48;GB:Q94KC4;GB:Q9SY93); similar to unknown [Populus trichocarpa] (GB:ABK92802.1); similar to unknown [Picea sitchensis] (GB:ABK21550.1); contains InterPro domain Zinc finger, Tim10/DDP-type; (InterPro:IPR004217) Range:  from: 22722370    to: 22723181    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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